EWM24955.1, cds5712 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|585106586|gb|EWM24955.1| (Zinc finger, RING-type, conserved site [Nannochloropsis gaditana]) HSP 1 Score: 1782.69 bits (4616), Expect = 0.000e+0 Identity = 891/891 (100.00%), Postives = 891/891 (100.00%), Query Frame = 0 Query: 1 MSGFEKLNTEEREPFNFYVVKQQNRALSAAVKQKERQIRELAVAIREQQRAQETDTALVSCVERHWRQVEGDARRLLELLGDNGAGVLSGDKNDEATGCASSILEKIVLRDADRFLLADVTKVAEAAAVDPLDDILRFDDEAGGEGASGADAMDTAGANPPGGKRGTDQGVDEIVVAKVDKSIQERCLLTRQVLQKLVQRLEDEGKRPGGRGVRGTEEDGHGPSTSMDGPAPPAHGVGSSFTVASEGGSDRAEMLQARVGFLQDRLTVARSCQQKLYRGLVRALKDRHRYRKAEDWGLVSRRGAQDLGQKGLRQEGGEDGGSNGHMESAGCCHDEHKMGGHKRKRSLIGAEAGADGNGKGEEGETTREAQLTAALDTLQELKQLVASRGEELTQMREEKMELNRRITSLAGQGLVDGGAGKSAPEKQEGGGIGFPGRLSEEQLVRQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAERGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT 891 MSGFEKLNTEEREPFNFYVVKQQNRALSAAVKQKERQIRELAVAIREQQRAQETDTALVSCVERHWRQVEGDARRLLELLGDNGAGVLSGDKNDEATGCASSILEKIVLRDADRFLLADVTKVAEAAAVDPLDDILRFDDEAGGEGASGADAMDTAGANPPGGKRGTDQGVDEIVVAKVDKSIQERCLLTRQVLQKLVQRLEDEGKRPGGRGVRGTEEDGHGPSTSMDGPAPPAHGVGSSFTVASEGGSDRAEMLQARVGFLQDRLTVARSCQQKLYRGLVRALKDRHRYRKAEDWGLVSRRGAQDLGQKGLRQEGGEDGGSNGHMESAGCCHDEHKMGGHKRKRSLIGAEAGADGNGKGEEGETTREAQLTAALDTLQELKQLVASRGEELTQMREEKMELNRRITSLAGQGLVDGGAGKSAPEKQEGGGIGFPGRLSEEQLVRQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAERGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT Sbjct: 1 MSGFEKLNTEEREPFNFYVVKQQNRALSAAVKQKERQIRELAVAIREQQRAQETDTALVSCVERHWRQVEGDARRLLELLGDNGAGVLSGDKNDEATGCASSILEKIVLRDADRFLLADVTKVAEAAAVDPLDDILRFDDEAGGEGASGADAMDTAGANPPGGKRGTDQGVDEIVVAKVDKSIQERCLLTRQVLQKLVQRLEDEGKRPGGRGVRGTEEDGHGPSTSMDGPAPPAHGVGSSFTVASEGGSDRAEMLQARVGFLQDRLTVARSCQQKLYRGLVRALKDRHRYRKAEDWGLVSRRGAQDLGQKGLRQEGGEDGGSNGHMESAGCCHDEHKMGGHKRKRSLIGAEAGADGNGKGEEGETTREAQLTAALDTLQELKQLVASRGEELTQMREEKMELNRRITSLAGQGLVDGGAGKSAPEKQEGGGIGFPGRLSEEQLVRQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAERGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT 891
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|672167686|ref|XP_008803815.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X2 [Phoenix dactylifera]) HSP 1 Score: 114.39 bits (285), Expect = 2.618e-22 Identity = 134/487 (27.52%), Postives = 224/487 (46.00%), Query Frame = 0 Query: 437 RLSEEQLV---------RQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAE--RGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDE------------AKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGE----KEGLGAFQT---SLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERF---LLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890 RL+EE++V R+P + +++E L V SL +++G ++ + L + ++AA E R S + L R+ L D +A ++ R L + ELK+ L R E++ R + + E K W+ +Q LK+ DE A+ +S+Q LA E ++AEL ++LE++ E E L + + E ES+ AYE + Q L QQ+ E++ N +L E +K++ ++++ Q + + + V L E +++ LA+ R+ + +L E+ + QSL E Q+K A SR D++ L ++E+ERF L E++ ++RK + ++ + E G + +E + +LK CS+C R K+ VI KCYHLFC CIQ L R R+CP CG F NDVKPI++ Sbjct: 428 RLAEERIVLETKLEEALREPGRKKIIAEFKAL----------VSSLPKDMGIMQSE---LSKCKEAASELHSFRAEVQSLSSMLQRKEAELESISDRYANQLSEVRDLRQANQELKLFLEMYRRESTDSREVIESRDMEYK----SWALVQ-SLKSSLDEHNLEHRVKAANEAEAISQQRLA------TAEAKIAELRQKLEDSGREICKYSETLKSKHEEGEAYLSEIESIGQAYEDMQTQNQHLLQQITERDDYNIKLVIEGVKARQLNDALRTEIQVMDKKLQQANSVMVLYSLEVGHLDEQLKVWSEHVGKLAEDGRQNSIIWENAQRRLLDGWSESQQIRQSLDEIQSK--AGASRL-DVTELLIELEKERFNTKRLEEDLEVMSRKAEHLRAQTE----------GYSVLEKLRQEVREYRGILK---CSICLDRQKEVVIAKCYHLFCNQCIQRTLGNRQRRCPTCGMSFGPNDVKPIYI 874
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|743778350|ref|XP_010919635.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Elaeis guineensis]) HSP 1 Score: 113.235 bits (282), Expect = 7.194e-22 Identity = 138/460 (30.00%), Postives = 220/460 (47.83%), Query Frame = 0 Query: 470 VLSLRQNVGDLEGKVRLLGRSRQAAVEAE--RGHFISRTEELTRENQSLRRFVDEHALEMEAKRVL------VRQAD-ELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDE------------AKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGE----KEGLGAFQT---SLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQEL-VELLRTQCAGLAQTRRETEEGAQADAEKLHQAQR-------EADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLR---EEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890 V SL +++G ++ + LG+ ++AA E R S + L R+ L D++A ++ + L +RQA+ EL + L R E++ R + + E K W+ +Q LK+ DE A+ +S+Q LA E ++AEL ++LE+ E E L + + E ES+ AYE + Q L QQ+ E++ N +L E +++ MQ+ A E + D +L+QA +V +L L V L Q ++ + E + ++ L AQR E+ + QSL E Q+K A TSR +++ L ++E+ERF ++ E++ +TRK + ++ + E G L RE +L CS+C R K+ VI KCYHLFC CIQ + R R+CPACG F NDVKPI++ Sbjct: 460 VSSLPKDMGIMQSE---LGKYKEAASELHSLRAEVQSLSSMLQRKEAELECISDQYASQLSEVKKLQSAVRDLRQANQELNIFLEMYRRESTDSREVIESRDMEYK----SWALVQ-SLKSSLDEHNLERRVKAANEAEAVSQQRLA------TAEAKIAELRQKLEDTGREICKYSETLKSKHEEGEAYLSEIESIGQAYEDMQTQNQHLLQQITERDDYNVKLVVEGVRA-----MQLNDALRTEIQLMDK---KLQQANSVMDLYNLKVGHLDEQLKVWSEHVGKLAEDGRQNSVILENAQRRLLDVWGESQQLRQSLDEIQSK--AGTSRL-NVTELLIELEKERFNMKRIEEDLEVMTRKAEHLKAQTE-------GYSVLEKLRHEIREYR------GILKCSICLDRQKEVVIAKCYHLFCNQCIQKTVGHRQRRCPACGMSFGPNDVKPIYI 881
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|720005161|ref|XP_010257567.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 [Nelumbo nucifera]) HSP 1 Score: 112.464 bits (280), Expect = 1.006e-21 Identity = 131/445 (29.44%), Postives = 204/445 (45.84%), Query Frame = 0 Query: 468 RQVLSLRQNVGDLEG-----KVRLLGRSRQAAVE-AERGHFISRTEELTRENQSLRRFVDEH---------ALEM-EAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQ----DFERLRLEQAATVKELQELVELLRTQCAGLAQ----TRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPI 888 R+ +SLR+ L+ K L G S + A + AE + E+L +E Q L+ F+D H +E+ E++R + QA+ LK AL E E LR +K A + Q++LKA E E L ++ +A E + ELT ++ GE E + E E++ AYE + Q L QQV +++ N +L E +K+K + + + AL ++ Q E L+L+ A ++++ V + A L E + ADAEK + + A A S +EF+ M ++ +EL+ E+ L EE+ L K+ K+ + +G + +E +L C VC R K+ VITKCYHLFC PCIQ NL++R RKCP CG F +NDV+ + Sbjct: 482 REAISLREEAHSLKALLSKKKSELKGLSDRCAEQIAEIKSLKALIEKLQKEKQELQIFLDMHGQGCFDNRDVMEIKESERRALLQAEVLKNALEEHSLE---LR---------VKAANEAEAACQQRLKAAEAEIADLRAKL-------DASERDILELTEAIKIKDGEAE-------TYISEIETIGQAYEDMQTQNQHLLQQVTDRDDYNIKLVSESVKTKQAQSILLSEKQALTKQLQQVNASLESLKLKIAHGEEQMK--VYIAEAGKASLENRHLAVSTEIAKWELADAEKELKWLKAA--VASSDKEFEQNQRKMV----EIQKELESERSEKKRLEEELTELKDKVVKL--------SSESGEAAIQKLQDEIKECK------AILKCGVCFDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPGCGTAFGQNDVRFV 878
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|1026771416|gb|OAE31066.1| (hypothetical protein AXG93_4031s1170 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 112.849 bits (281), Expect = 1.106e-21 Identity = 126/382 (32.98%), Postives = 191/382 (50.00%), Query Frame = 0 Query: 539 ELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRL-------AELTRQLEE----AQGEKEGLGAFQ---TSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSK-ATEQMQVERASALERRQQ-----DFERLRL----EQA-ATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQ-SLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLK----LLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890 ELK+ L E+S R + Q AE + W+Q+ E+LKA DE L +V A A+ A + RL AEL +QL++ A +E L A + E E++ AYE + QRL QQ+ E++ N +L E LK+K A +Q ER + R +Q D ++ RL EQA + +++L + + R + L +R+T A+ E+ + + A EAAQ ++ E +K++ ++ EL+K E+ L+EEV L K+ + L S G + + LK +L CSVC+ R K+ VITKCYHLFC PCIQ NL++R RKCP CG F +NDV+ +++ Sbjct: 632 ELKLILEMYGRESSDPRDVMELQQAECR----AWAQV-ERLKAALDE-HSLELRVKAANEAEAACQQRLTAAEADIAELRQQLDDSERVAMELRESLKAKNEEGDAYISEIETIGQAYEDMQTQNQRLLQQLTERDDYNVQLVAEGLKTKQALANLQSERILLMRRIEQNHVSADTQKQRLARQEEQARSYLEQLAKATDESRGYMSALENAKRKT-----AEVEREMTSTKAALEAAQKTVEERGHKIV-------EVQGELEKERFEKRRLQEEVDGLNTKVAR-----------------LASHHDGNPLIERLQEELKEYRAILKCSVCHDRAKEVVITKCYHLFCGPCIQRNLELRHRKCPGCGVPFGQNDVRTVYI 978
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|470434192|ref|XP_004338651.1| (zinc finger, C3HC4 type (RING finger) domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440795518|gb|ELR16638.1| zinc finger, C3HC4 type (RING finger) domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 111.694 bits (278), Expect = 1.902e-21 Identity = 85/292 (29.11%), Postives = 143/292 (48.97%), Query Frame = 0 Query: 607 LAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKA--------TEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890 L++ + + E Q + A + E E ++ +E E RL ++ +K++ +L + +KS+ T+Q+Q + A ER +Q E L+ E+ K ++E + Q + + A+ A++L + + + D+A +L E++ KL +S L R DK+ R L EE +L RK++++ + G+ L TL K+L C VCN KD VIT+C+H+FC PC++S L++R+RKCP C K F ENDV I+L Sbjct: 637 LSKADQSIRELQKSLDATKAENAAYLSEMEVISKEFESTMEQNTRLLHELSDKDETTTKLMSDRIKSEQLQNQLREETKQLQFQIKLAGERYEQQKELLKREETK-AKMIEEQMIKANEQISSFTNLIEAHKRAARDAAQQLVEFKAKLDQATAALAEYKKKLDEQSS---ALERGEDKISR----LMEERNTLKRKVERLSAR-------GSVDTLLEEEVS---------TLRKMLRCPVCNDNMKDTVITRCFHVFCNPCVKSRLQLRNRKCPGCAKPFGENDVHSIYL 904
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|672167684|ref|XP_008803814.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Phoenix dactylifera]) HSP 1 Score: 111.309 bits (277), Expect = 2.512e-21 Identity = 136/494 (27.53%), Postives = 228/494 (46.15%), Query Frame = 0 Query: 437 RLSEEQLV---------RQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAE--RGHFISRTEELTRENQSLRRFVDEHALEMEAKRVL------VRQAD-ELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDE------------AKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGE----KEGLGAFQT---SLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERF---LLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890 RL+EE++V R+P + +++E L V SL +++G ++ + L + ++AA E R S + L R+ L D +A ++ + L +RQA+ ELK+ L R E++ R + + E K W+ +Q LK+ DE A+ +S+Q LA E ++AEL ++LE++ E E L + + E ES+ AYE + Q L QQ+ E++ N +L E +K++ ++++ Q + + + V L E +++ LA+ R+ + +L E+ + QSL E Q+K A SR D++ L ++E+ERF L E++ ++RK + ++ + E G + +E + +LK CS+C R K+ VI KCYHLFC CIQ L R R+CP CG F NDVKPI++ Sbjct: 428 RLAEERIVLETKLEEALREPGRKKIIAEFKAL----------VSSLPKDMGIMQSE---LSKCKEAASELHSFRAEVQSLSSMLQRKEAELESISDRYANQLSEVKKLQSTVRDLRQANQELKLFLEMYRRESTDSREVIESRDMEYK----SWALVQ-SLKSSLDEHNLEHRVKAANEAEAISQQRLA------TAEAKIAELRQKLEDSGREICKYSETLKSKHEEGEAYLSEIESIGQAYEDMQTQNQHLLQQITERDDYNIKLVIEGVKARQLNDALRTEIQVMDKKLQQANSVMVLYSLEVGHLDEQLKVWSEHVGKLAEDGRQNSIIWENAQRRLLDGWSESQQIRQSLDEIQSK--AGASRL-DVTELLIELEKERFNTKRLEEDLEVMSRKAEHLRAQTE----------GYSVLEKLRQEVREYRGILK---CSICLDRQKEVVIAKCYHLFCNQCIQRTLGNRQRRCPTCGMSFGPNDVKPIYI 881
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|298715142|emb|CBJ27830.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 110.923 bits (276), Expect = 3.291e-21 Identity = 95/306 (31.05%), Postives = 151/306 (49.35%), Query Frame = 0 Query: 600 DEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKAT--------EQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQK---VQVK-IEPTQGAGAGGMGLNSATGGGREAAQNET--LLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT 891 DE +LA+ RQLE G A + +L E + AAY + E Q+L Q++ L DE+ +KA M+++ +A++ R Q L+ + V E +E V+ R Q LA R E A AD +A++E D Q+ + + A+ E L+ ++ KVE E +E+V +LTR+L+K + K +E + L+ E E L K++ CSVC + K+ VITKC+H+FC C++ ++K R+RKCPACGK ++ +DV ++LT Sbjct: 600 DENLRAKLADSLRQLE-------GSKAIEDALQSELNTTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVRATMELQIKTAMQMRDQGHA-LKQKALDLVAEAEEKVQHERKQNLELA--REVHTEKAHAD-----RARQEVDFLTQTKQAVETAHSALKVHCEQLNSKVGKVEEEVNSTKEQVATLTRRLEKSRSLNAKLVEQVKETAKNTNSLSKVEEEDNEMRDAELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACGKVYAPDDVHELWLT 890
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|970004658|ref|XP_015063132.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 [Solanum pennellii]) HSP 1 Score: 108.997 bits (271), Expect = 1.273e-20 Identity = 114/392 (29.08%), Postives = 182/392 (46.43%), Query Frame = 0 Query: 507 EELTRENQSLRRFVDEHALEMEAKRVL-VRQADELKVALAEERAEASGLRAITTHQAAEL--KEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGAD-EAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVER----ASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKI-EPTQGAGAGGMG-LNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPI 888 E++ R+ Q L F LEM +++ R E++ + ++A LRA EL K A S Q++L A E E +A L A+ +A + + ELT ++ +GE E + E E++ AYE + Q L QQ+ E++ N +L E +K K + + + R + L++ + E L++ T E Q V + T+ Q R A L +RE+ +A + L+ ++ L+ E L R+LD+ ++ER R E L L ++ + E T +G + L + +L C VC R K+ VITKCYHLFC PCIQ NL++R RKCPACG F ++D++ + Sbjct: 530 EKMQRDKQELEIF-----LEMLGQQIYDNRDISEIRESERRAHSQAEILRAALNEHDLELRVKAANEAESACQQRLSAAEAE--------IAELRAELDASDRGVLELTEAIKIKEGESE-------TYISEIETIGQAYEDMQTQNQHLLQQLAERDDYNIKLVSESVKIKQEQSLLLSRKQVSTAQLQQSKTSLESLKMR--ITQSEDQMKVHI--TEALSYTQEDRHL-------ALLLETTKRESGDAEKELKWLRSAALSAEKEYEQLHRKLDEFQKERETERSEKKKLDEDLVELSNTVDELTSASGEAAVQRLQDEINDSK---------AILKCGVCLDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPACGTAFGQSDIRFV 881
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|460365411|ref|XP_004228596.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 [Solanum lycopersicum]) HSP 1 Score: 108.612 bits (270), Expect = 1.975e-20 Identity = 114/396 (28.79%), Postives = 185/396 (46.72%), Query Frame = 0 Query: 507 EELTRENQSLRRFVDEHALEMEAKRVL-VRQADELKVALAEERAEASGLRAITTHQAAEL--KEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGAD-EAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAAT--------VKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKI-EPTQGAGAGGMG-LNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPI 888 E++ R+ Q L F LEM +++ R E++ + ++A LRA EL K A S Q++L A E E +A L A+ +A + + ELT ++ +GE E + E E++ AYE + Q L QQ+ E++ N +L E +K K E++S L R+Q +L+Q+ T + + ++ +++ T+ Q R A L +RE+ +A + L+ ++ L+ E L R+LD+ ++ER R E L L ++ + E T +G + L + +L C VC R K+ VITKCYHLFC PCIQ NL++R RKCPACG F ++D++ + Sbjct: 530 EKMQRDKQELEIF-----LEMLGQQIYDNRDISEIRESERRAHSQAEILRAALNEHDLELRVKAANEAESACQQRLSAAEAE--------IAELRAELDASDRGVLELTEAIKIKEGEAE-------TYISEIETIGQAYEDMQTQNQHLLQQMAERDDYNIKLVSESVKIKQ------EQSSLLSRKQ--VSTAQLQQSKTSLESLKMRITQSEDQMKVHITEALSYTQEDRHL-------ALLLETTKRESGDAEKELKWLRSAALSAEKEYEQLHRKLDEFQKERETERSEKKKLDEDLVELSNTVDELTSASGEAAVQRLQDEINDSK---------AILKCGVCLDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPACGTAFGQSDIRFV 881 The following BLAST results are available for this feature:
BLAST of EWM24955.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|