EWM24955.1, cds5712 (CDS) Nannochloropsis gaditana

Overview
NameEWM24955.1
Unique Namecds5712
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:685599..688274 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24955.1
ProductZinc finger, RING-type, conserved site
Orig transcript idgnl|cribi|Naga_100148g5.7147.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:685599..688274 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0046872metal ion binding
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Homology
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|585106586|gb|EWM24955.1| (Zinc finger, RING-type, conserved site [Nannochloropsis gaditana])

HSP 1 Score: 1782.69 bits (4616), Expect = 0.000e+0
Identity = 891/891 (100.00%), Postives = 891/891 (100.00%), Query Frame = 0
Query:    1 MSGFEKLNTEEREPFNFYVVKQQNRALSAAVKQKERQIRELAVAIREQQRAQETDTALVSCVERHWRQVEGDARRLLELLGDNGAGVLSGDKNDEATGCASSILEKIVLRDADRFLLADVTKVAEAAAVDPLDDILRFDDEAGGEGASGADAMDTAGANPPGGKRGTDQGVDEIVVAKVDKSIQERCLLTRQVLQKLVQRLEDEGKRPGGRGVRGTEEDGHGPSTSMDGPAPPAHGVGSSFTVASEGGSDRAEMLQARVGFLQDRLTVARSCQQKLYRGLVRALKDRHRYRKAEDWGLVSRRGAQDLGQKGLRQEGGEDGGSNGHMESAGCCHDEHKMGGHKRKRSLIGAEAGADGNGKGEEGETTREAQLTAALDTLQELKQLVASRGEELTQMREEKMELNRRITSLAGQGLVDGGAGKSAPEKQEGGGIGFPGRLSEEQLVRQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAERGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT 891
            MSGFEKLNTEEREPFNFYVVKQQNRALSAAVKQKERQIRELAVAIREQQRAQETDTALVSCVERHWRQVEGDARRLLELLGDNGAGVLSGDKNDEATGCASSILEKIVLRDADRFLLADVTKVAEAAAVDPLDDILRFDDEAGGEGASGADAMDTAGANPPGGKRGTDQGVDEIVVAKVDKSIQERCLLTRQVLQKLVQRLEDEGKRPGGRGVRGTEEDGHGPSTSMDGPAPPAHGVGSSFTVASEGGSDRAEMLQARVGFLQDRLTVARSCQQKLYRGLVRALKDRHRYRKAEDWGLVSRRGAQDLGQKGLRQEGGEDGGSNGHMESAGCCHDEHKMGGHKRKRSLIGAEAGADGNGKGEEGETTREAQLTAALDTLQELKQLVASRGEELTQMREEKMELNRRITSLAGQGLVDGGAGKSAPEKQEGGGIGFPGRLSEEQLVRQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAERGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT
Sbjct:    1 MSGFEKLNTEEREPFNFYVVKQQNRALSAAVKQKERQIRELAVAIREQQRAQETDTALVSCVERHWRQVEGDARRLLELLGDNGAGVLSGDKNDEATGCASSILEKIVLRDADRFLLADVTKVAEAAAVDPLDDILRFDDEAGGEGASGADAMDTAGANPPGGKRGTDQGVDEIVVAKVDKSIQERCLLTRQVLQKLVQRLEDEGKRPGGRGVRGTEEDGHGPSTSMDGPAPPAHGVGSSFTVASEGGSDRAEMLQARVGFLQDRLTVARSCQQKLYRGLVRALKDRHRYRKAEDWGLVSRRGAQDLGQKGLRQEGGEDGGSNGHMESAGCCHDEHKMGGHKRKRSLIGAEAGADGNGKGEEGETTREAQLTAALDTLQELKQLVASRGEELTQMREEKMELNRRITSLAGQGLVDGGAGKSAPEKQEGGGIGFPGRLSEEQLVRQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAERGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT 891          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|672167686|ref|XP_008803815.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X2 [Phoenix dactylifera])

HSP 1 Score: 114.39 bits (285), Expect = 2.618e-22
Identity = 134/487 (27.52%), Postives = 224/487 (46.00%), Query Frame = 0
Query:  437 RLSEEQLV---------RQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAE--RGHFISRTEELTRENQSLRRFVDEHALEMEAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDE------------AKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGE----KEGLGAFQT---SLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERF---LLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890
            RL+EE++V         R+P  + +++E   L          V SL +++G ++ +   L + ++AA E    R    S +  L R+   L    D +A ++   R L +   ELK+ L   R E++  R +   +  E K     W+ +Q  LK+  DE            A+ +S+Q LA        E ++AEL ++LE++  E     E L +      +   E ES+  AYE +    Q L QQ+ E++  N +L  E +K++            ++++ Q    + +  +  V  L E +++       LA+  R+     +    +L     E+ +  QSL E Q+K  A  SR  D++  L ++E+ERF    L E++  ++RK + ++ + E          G +      +E  +   +LK   CS+C  R K+ VI KCYHLFC  CIQ  L  R R+CP CG  F  NDVKPI++
Sbjct:  428 RLAEERIVLETKLEEALREPGRKKIIAEFKAL----------VSSLPKDMGIMQSE---LSKCKEAASELHSFRAEVQSLSSMLQRKEAELESISDRYANQLSEVRDLRQANQELKLFLEMYRRESTDSREVIESRDMEYK----SWALVQ-SLKSSLDEHNLEHRVKAANEAEAISQQRLA------TAEAKIAELRQKLEDSGREICKYSETLKSKHEEGEAYLSEIESIGQAYEDMQTQNQHLLQQITERDDYNIKLVIEGVKARQLNDALRTEIQVMDKKLQQANSVMVLYSLEVGHLDEQLKVWSEHVGKLAEDGRQNSIIWENAQRRLLDGWSESQQIRQSLDEIQSK--AGASRL-DVTELLIELEKERFNTKRLEEDLEVMSRKAEHLRAQTE----------GYSVLEKLRQEVREYRGILK---CSICLDRQKEVVIAKCYHLFCNQCIQRTLGNRQRRCPTCGMSFGPNDVKPIYI 874          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|743778350|ref|XP_010919635.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Elaeis guineensis])

HSP 1 Score: 113.235 bits (282), Expect = 7.194e-22
Identity = 138/460 (30.00%), Postives = 220/460 (47.83%), Query Frame = 0
Query:  470 VLSLRQNVGDLEGKVRLLGRSRQAAVEAE--RGHFISRTEELTRENQSLRRFVDEHALEMEAKRVL------VRQAD-ELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDE------------AKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGE----KEGLGAFQT---SLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQEL-VELLRTQCAGLAQTRRETEEGAQADAEKLHQAQR-------EADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLR---EEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890
            V SL +++G ++ +   LG+ ++AA E    R    S +  L R+   L    D++A ++   + L      +RQA+ EL + L   R E++  R +   +  E K     W+ +Q  LK+  DE            A+ +S+Q LA        E ++AEL ++LE+   E     E L +      +   E ES+  AYE +    Q L QQ+ E++  N +L  E +++     MQ+  A   E +  D    +L+QA +V +L  L V  L  Q    ++   +  E  + ++  L  AQR       E+ +  QSL E Q+K  A TSR  +++  L ++E+ERF ++   E++  +TRK + ++ + E       G   L       RE         +L CS+C  R K+ VI KCYHLFC  CIQ  +  R R+CPACG  F  NDVKPI++
Sbjct:  460 VSSLPKDMGIMQSE---LGKYKEAASELHSLRAEVQSLSSMLQRKEAELECISDQYASQLSEVKKLQSAVRDLRQANQELNIFLEMYRRESTDSREVIESRDMEYK----SWALVQ-SLKSSLDEHNLERRVKAANEAEAVSQQRLA------TAEAKIAELRQKLEDTGREICKYSETLKSKHEEGEAYLSEIESIGQAYEDMQTQNQHLLQQITERDDYNVKLVVEGVRA-----MQLNDALRTEIQLMDK---KLQQANSVMDLYNLKVGHLDEQLKVWSEHVGKLAEDGRQNSVILENAQRRLLDVWGESQQLRQSLDEIQSK--AGTSRL-NVTELLIELEKERFNMKRIEEDLEVMTRKAEHLKAQTE-------GYSVLEKLRHEIREYR------GILKCSICLDRQKEVVIAKCYHLFCNQCIQKTVGHRQRRCPACGMSFGPNDVKPIYI 881          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|720005161|ref|XP_010257567.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 [Nelumbo nucifera])

HSP 1 Score: 112.464 bits (280), Expect = 1.006e-21
Identity = 131/445 (29.44%), Postives = 204/445 (45.84%), Query Frame = 0
Query:  468 RQVLSLRQNVGDLEG-----KVRLLGRSRQAAVE-AERGHFISRTEELTRENQSLRRFVDEH---------ALEM-EAKRVLVRQADELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQ----DFERLRLEQAATVKELQELVELLRTQCAGLAQ----TRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPI 888
            R+ +SLR+    L+      K  L G S + A + AE     +  E+L +E Q L+ F+D H          +E+ E++R  + QA+ LK AL E   E   LR         +K A    +  Q++LKA E E   L  ++       +A E  + ELT  ++   GE E       +   E E++  AYE +    Q L QQV +++  N +L  E +K+K  + + +    AL ++ Q      E L+L+ A   ++++  V +     A L         E  +   ADAEK  +  + A   A S +EF+     M     ++ +EL+    E+  L EE+  L  K+ K+         + +G   +       +E         +L C VC  R K+ VITKCYHLFC PCIQ NL++R RKCP CG  F +NDV+ +
Sbjct:  482 REAISLREEAHSLKALLSKKKSELKGLSDRCAEQIAEIKSLKALIEKLQKEKQELQIFLDMHGQGCFDNRDVMEIKESERRALLQAEVLKNALEEHSLE---LR---------VKAANEAEAACQQRLKAAEAEIADLRAKL-------DASERDILELTEAIKIKDGEAE-------TYISEIETIGQAYEDMQTQNQHLLQQVTDRDDYNIKLVSESVKTKQAQSILLSEKQALTKQLQQVNASLESLKLKIAHGEEQMK--VYIAEAGKASLENRHLAVSTEIAKWELADAEKELKWLKAA--VASSDKEFEQNQRKMV----EIQKELESERSEKKRLEEELTELKDKVVKL--------SSESGEAAIQKLQDEIKECK------AILKCGVCFDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPGCGTAFGQNDVRFV 878          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|1026771416|gb|OAE31066.1| (hypothetical protein AXG93_4031s1170 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 112.849 bits (281), Expect = 1.106e-21
Identity = 126/382 (32.98%), Postives = 191/382 (50.00%), Query Frame = 0
Query:  539 ELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGADEAREGRL-------AELTRQLEE----AQGEKEGLGAFQ---TSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSK-ATEQMQVERASALERRQQ-----DFERLRL----EQA-ATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQ-SLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLK----LLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890
            ELK+ L     E+S  R +   Q AE +     W+Q+ E+LKA  DE   L  +V A   A+ A + RL       AEL +QL++    A   +E L A      +   E E++  AYE +    QRL QQ+ E++  N +L  E LK+K A   +Q ER   + R +Q     D ++ RL    EQA + +++L +  +  R   + L   +R+T     A+ E+   + + A EAAQ ++ E  +K++       ++  EL+K   E+  L+EEV  L  K+ +                 L S   G     + +  LK    +L CSVC+ R K+ VITKCYHLFC PCIQ NL++R RKCP CG  F +NDV+ +++
Sbjct:  632 ELKLILEMYGRESSDPRDVMELQQAECR----AWAQV-ERLKAALDE-HSLELRVKAANEAEAACQQRLTAAEADIAELRQQLDDSERVAMELRESLKAKNEEGDAYISEIETIGQAYEDMQTQNQRLLQQLTERDDYNVQLVAEGLKTKQALANLQSERILLMRRIEQNHVSADTQKQRLARQEEQARSYLEQLAKATDESRGYMSALENAKRKT-----AEVEREMTSTKAALEAAQKTVEERGHKIV-------EVQGELEKERFEKRRLQEEVDGLNTKVAR-----------------LASHHDGNPLIERLQEELKEYRAILKCSVCHDRAKEVVITKCYHLFCGPCIQRNLELRHRKCPGCGVPFGQNDVRTVYI 978          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|470434192|ref|XP_004338651.1| (zinc finger, C3HC4 type (RING finger) domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440795518|gb|ELR16638.1| zinc finger, C3HC4 type (RING finger) domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 111.694 bits (278), Expect = 1.902e-21
Identity = 85/292 (29.11%), Postives = 143/292 (48.97%), Query Frame = 0
Query:  607 LAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKA--------TEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890
            L++  + + E Q   +   A   +   E E ++  +E   E   RL  ++ +K++   +L  + +KS+         T+Q+Q +   A ER +Q  E L+ E+    K ++E +     Q +         +  A+  A++L + + + D+A  +L E++ KL   +S    L R  DK+ R    L EE  +L RK++++  +       G+    L              TL K+L C VCN   KD VIT+C+H+FC PC++S L++R+RKCP C K F ENDV  I+L
Sbjct:  637 LSKADQSIRELQKSLDATKAENAAYLSEMEVISKEFESTMEQNTRLLHELSDKDETTTKLMSDRIKSEQLQNQLREETKQLQFQIKLAGERYEQQKELLKREETK-AKMIEEQMIKANEQISSFTNLIEAHKRAARDAAQQLVEFKAKLDQATAALAEYKKKLDEQSS---ALERGEDKISR----LMEERNTLKRKVERLSAR-------GSVDTLLEEEVS---------TLRKMLRCPVCNDNMKDTVITRCFHVFCNPCVKSRLQLRNRKCPGCAKPFGENDVHSIYL 904          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|672167684|ref|XP_008803814.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Phoenix dactylifera])

HSP 1 Score: 111.309 bits (277), Expect = 2.512e-21
Identity = 136/494 (27.53%), Postives = 228/494 (46.15%), Query Frame = 0
Query:  437 RLSEEQLV---------RQPPYQSLLSERDNLRRESQMKERQVLSLRQNVGDLEGKVRLLGRSRQAAVEAE--RGHFISRTEELTRENQSLRRFVDEHALEMEAKRVL------VRQAD-ELKVALAEERAEASGLRAITTHQAAELKEARAQWSQLQEQLKAREDE------------AKRLSEQVLAPLGADEAREGRLAELTRQLEEAQGE----KEGLGAFQT---SLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERF---LLREEVGSLTRKLQKVQVKIEPTQGAGAGGMGLNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFL 890
            RL+EE++V         R+P  + +++E   L          V SL +++G ++ +   L + ++AA E    R    S +  L R+   L    D +A ++   + L      +RQA+ ELK+ L   R E++  R +   +  E K     W+ +Q  LK+  DE            A+ +S+Q LA        E ++AEL ++LE++  E     E L +      +   E ES+  AYE +    Q L QQ+ E++  N +L  E +K++            ++++ Q    + +  +  V  L E +++       LA+  R+     +    +L     E+ +  QSL E Q+K  A  SR  D++  L ++E+ERF    L E++  ++RK + ++ + E          G +      +E  +   +LK   CS+C  R K+ VI KCYHLFC  CIQ  L  R R+CP CG  F  NDVKPI++
Sbjct:  428 RLAEERIVLETKLEEALREPGRKKIIAEFKAL----------VSSLPKDMGIMQSE---LSKCKEAASELHSFRAEVQSLSSMLQRKEAELESISDRYANQLSEVKKLQSTVRDLRQANQELKLFLEMYRRESTDSREVIESRDMEYK----SWALVQ-SLKSSLDEHNLEHRVKAANEAEAISQQRLA------TAEAKIAELRQKLEDSGREICKYSETLKSKHEEGEAYLSEIESIGQAYEDMQTQNQHLLQQITERDDYNIKLVIEGVKARQLNDALRTEIQVMDKKLQQANSVMVLYSLEVGHLDEQLKVWSEHVGKLAEDGRQNSIIWENAQRRLLDGWSESQQIRQSLDEIQSK--AGASRL-DVTELLIELEKERFNTKRLEEDLEVMSRKAEHLRAQTE----------GYSVLEKLRQEVREYRGILK---CSICLDRQKEVVIAKCYHLFCNQCIQRTLGNRQRRCPTCGMSFGPNDVKPIYI 881          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|298715142|emb|CBJ27830.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 110.923 bits (276), Expect = 3.291e-21
Identity = 95/306 (31.05%), Postives = 151/306 (49.35%), Query Frame = 0
Query:  600 DEAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKAT--------EQMQVERASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQK---VQVK-IEPTQGAGAGGMGLNSATGGGREAAQNET--LLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPIFLT 891
            DE    +LA+  RQLE       G  A + +L  E  +  AAY +  E  Q+L Q++         L DE+  +KA           M+++  +A++ R Q    L+ +    V E +E V+  R Q   LA  R    E A AD     +A++E D   Q+ +  +    A+    E L+ ++ KVE E    +E+V +LTR+L+K   +  K +E  +        L+       E    E   L K++ CSVC  + K+ VITKC+H+FC  C++ ++K R+RKCPACGK ++ +DV  ++LT
Sbjct:  600 DENLRAKLADSLRQLE-------GSKAIEDALQSELNTTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVRATMELQIKTAMQMRDQGHA-LKQKALDLVAEAEEKVQHERKQNLELA--REVHTEKAHAD-----RARQEVDFLTQTKQAVETAHSALKVHCEQLNSKVGKVEEEVNSTKEQVATLTRRLEKSRSLNAKLVEQVKETAKNTNSLSKVEEEDNEMRDAELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACGKVYAPDDVHELWLT 890          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|970004658|ref|XP_015063132.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 [Solanum pennellii])

HSP 1 Score: 108.997 bits (271), Expect = 1.273e-20
Identity = 114/392 (29.08%), Postives = 182/392 (46.43%), Query Frame = 0
Query:  507 EELTRENQSLRRFVDEHALEMEAKRVL-VRQADELKVALAEERAEASGLRAITTHQAAEL--KEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGAD-EAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVER----ASALERRQQDFERLRLEQAATVKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKI-EPTQGAGAGGMG-LNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPI 888
            E++ R+ Q L  F     LEM  +++   R   E++ +     ++A  LRA       EL  K A    S  Q++L A E E        +A L A+ +A +  + ELT  ++  +GE E       +   E E++  AYE +    Q L QQ+ E++  N +L  E +K K  + + + R     + L++ +   E L++    T  E Q  V +  T+     Q  R         A  L   +RE+ +A + L+  ++  L+     E L R+LD+ ++ER   R E   L   L ++   + E T  +G   +  L       +          +L C VC  R K+ VITKCYHLFC PCIQ NL++R RKCPACG  F ++D++ +
Sbjct:  530 EKMQRDKQELEIF-----LEMLGQQIYDNRDISEIRESERRAHSQAEILRAALNEHDLELRVKAANEAESACQQRLSAAEAE--------IAELRAELDASDRGVLELTEAIKIKEGESE-------TYISEIETIGQAYEDMQTQNQHLLQQLAERDDYNIKLVSESVKIKQEQSLLLSRKQVSTAQLQQSKTSLESLKMR--ITQSEDQMKVHI--TEALSYTQEDRHL-------ALLLETTKRESGDAEKELKWLRSAALSAEKEYEQLHRKLDEFQKERETERSEKKKLDEDLVELSNTVDELTSASGEAAVQRLQDEINDSK---------AILKCGVCLDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPACGTAFGQSDIRFV 881          
BLAST of EWM24955.1 vs. NCBI_GenBank
Match: gi|460365411|ref|XP_004228596.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 [Solanum lycopersicum])

HSP 1 Score: 108.612 bits (270), Expect = 1.975e-20
Identity = 114/396 (28.79%), Postives = 185/396 (46.72%), Query Frame = 0
Query:  507 EELTRENQSLRRFVDEHALEMEAKRVL-VRQADELKVALAEERAEASGLRAITTHQAAEL--KEARAQWSQLQEQLKAREDEAKRLSEQVLAPLGAD-EAREGRLAELTRQLEEAQGEKEGLGAFQTSLFQETESLTAAYEKLSESTQRLKQQVEEKEKRNNRLQDELLKSKATEQMQVERASALERRQQDFERLRLEQAAT--------VKELQELVELLRTQCAGLAQTRRETEEGAQADAEKLHQAQREADEAAQSLREFQNKLLAMTSRAEDLSRELDKVERERFLLREEVGSLTRKLQKVQVKI-EPTQGAGAGGMG-LNSATGGGREAAQNETLLKLLNCSVCNVRWKDCVITKCYHLFCQPCIQSNLKVRSRKCPACGKHFSENDVKPI 888
            E++ R+ Q L  F     LEM  +++   R   E++ +     ++A  LRA       EL  K A    S  Q++L A E E        +A L A+ +A +  + ELT  ++  +GE E       +   E E++  AYE +    Q L QQ+ E++  N +L  E +K K       E++S L R+Q      +L+Q+ T        + + ++ +++  T+     Q  R         A  L   +RE+ +A + L+  ++  L+     E L R+LD+ ++ER   R E   L   L ++   + E T  +G   +  L       +          +L C VC  R K+ VITKCYHLFC PCIQ NL++R RKCPACG  F ++D++ +
Sbjct:  530 EKMQRDKQELEIF-----LEMLGQQIYDNRDISEIRESERRAHSQAEILRAALNEHDLELRVKAANEAESACQQRLSAAEAE--------IAELRAELDASDRGVLELTEAIKIKEGEAE-------TYISEIETIGQAYEDMQTQNQHLLQQMAERDDYNIKLVSESVKIKQ------EQSSLLSRKQ--VSTAQLQQSKTSLESLKMRITQSEDQMKVHITEALSYTQEDRHL-------ALLLETTKRESGDAEKELKWLRSAALSAEKEYEQLHRKLDEFQKERETERSEKKKLDEDLVELSNTVDELTSASGEAAVQRLQDEINDSK---------AILKCGVCLDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPACGTAFGQSDIRFV 881          
The following BLAST results are available for this feature:
BLAST of EWM24955.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106586|gb|EWM24955.1|0.000e+0100.00Zinc finger, RING-type, conserved site [Nannochlor... [more]
gi|672167686|ref|XP_008803815.1|2.618e-2227.52PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1... [more]
gi|743778350|ref|XP_010919635.1|7.194e-2230.00PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1... [more]
gi|720005161|ref|XP_010257567.1|1.006e-2129.44PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2... [more]
gi|1026771416|gb|OAE31066.1|1.106e-2132.98hypothetical protein AXG93_4031s1170 [Marchantia p... [more]
gi|470434192|ref|XP_004338651.1|1.902e-2129.11zinc finger, C3HC4 type (RING finger) domain conta... [more]
gi|672167684|ref|XP_008803814.1|2.512e-2127.53PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1... [more]
gi|298715142|emb|CBJ27830.1|3.291e-2131.05conserved unknown protein [Ectocarpus siliculosus][more]
gi|970004658|ref|XP_015063132.1|1.273e-2029.08PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2... [more]
gi|460365411|ref|XP_004228596.1|1.975e-2028.79PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5727rna5727Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications