EWM24966.1, cds5699 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|585106598|gb|EWM24966.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1212.59 bits (3136), Expect = 0.000e+0 Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0 Query: 1 MPGLSLPLKLKRRLNIHSLYLNMHHIILHGSYSYTGRAVAKLLTLHFRLASCAMDPAISAASSANVSWNDTAIITRPIASSDWTTEEHARFLEGLKQYGRSWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTPPRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDGTRHLTKTFLKKAQCEGRLESGSWRSRFKLKNPRGVAKRHANRRKKVLARIRGSSGRSPYGHRHWRYGDHVGEEGEEEGDDVEEDEESGSERLEGGHDATSVCGTLSTYTTRSGRVVTFSRPSQHVQDTNSEAEENEERSHTADGIYVGEMPTYTHDESALLVESGMTIDTGVHTGRLGMAIVRDDDVKEHHAPKEGYEELSRDVSGVSASIPTPRTMVDVLSAFTMDPEGFPQWEYSGRREQGASLHPWTENDTVSARSGSDVFESSTKCVPQGYAALTSSVSSAATSAASNFSDSSCADGLKTQRDDMVMMMCSADDSLFWESESYNEEQDDDNSLTRPPVSPNADAANEEWISTFEQVPFM 581 MPGLSLPLKLKRRLNIHSLYLNMHHIILHGSYSYTGRAVAKLLTLHFRLASCAMDPAISAASSANVSWNDTAIITRPIASSDWTTEEHARFLEGLKQYGRSWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTPPRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDGTRHLTKTFLKKAQCEGRLESGSWRSRFKLKNPRGVAKRHANRRKKVLARIRGSSGRSPYGHRHWRYGDHVGEEGEEEGDDVEEDEESGSERLEGGHDATSVCGTLSTYTTRSGRVVTFSRPSQHVQDTNSEAEENEERSHTADGIYVGEMPTYTHDESALLVESGMTIDTGVHTGRLGMAIVRDDDVKEHHAPKEGYEELSRDVSGVSASIPTPRTMVDVLSAFTMDPEGFPQWEYSGRREQGASLHPWTENDTVSARSGSDVFESSTKCVPQGYAALTSSVSSAATSAASNFSDSSCADGLKTQRDDMVMMMCSADDSLFWESESYNEEQDDDNSLTRPPVSPNADAANEEWISTFEQVPFM Sbjct: 1 MPGLSLPLKLKRRLNIHSLYLNMHHIILHGSYSYTGRAVAKLLTLHFRLASCAMDPAISAASSANVSWNDTAIITRPIASSDWTTEEHARFLEGLKQYGRSWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTPPRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDGTRHLTKTFLKKAQCEGRLESGSWRSRFKLKNPRGVAKRHANRRKKVLARIRGSSGRSPYGHRHWRYGDHVGEEGEEEGDDVEEDEESGSERLEGGHDATSVCGTLSTYTTRSGRVVTFSRPSQHVQDTNSEAEENEERSHTADGIYVGEMPTYTHDESALLVESGMTIDTGVHTGRLGMAIVRDDDVKEHHAPKEGYEELSRDVSGVSASIPTPRTMVDVLSAFTMDPEGFPQWEYSGRREQGASLHPWTENDTVSARSGSDVFESSTKCVPQGYAALTSSVSSAATSAASNFSDSSCADGLKTQRDDMVMMMCSADDSLFWESESYNEEQDDDNSLTRPPVSPNADAANEEWISTFEQVPFM 581
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|585113277|gb|EWM30605.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 164.851 bits (416), Expect = 1.472e-42 Identity = 84/169 (49.70%), Postives = 110/169 (65.09%), Query Frame = 0 Query: 83 WTTEEHARFLEGLKQYGR-SWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTPPRTASTKG----------------KDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDGTRHLTKTFLKKAQCEG 234 WT EH FLEGL+++G+ +W+ IS ++ TR+ E+++ +A Y + Q K + A+ KG A +KEGHWTDEEHE FL+CW +YGKSWKK+S+++ TR+NEQIRTHAQKYF KL +LR GYEG+Y MDGTRHLTKTFL Q G Sbjct: 122 WTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQ-EKKKNAANKGAMAEIEGGGKESNGGGGPDGPGAGSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDGTRHLTKTFLGGTQPPG 289
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|1210516787|dbj|GAX24276.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 86.2705 bits (212), Expect = 3.520e-14 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 0 Query: 137 RTASTKGKDGASAARAKEGH----WTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDG 218 ++A+T+G G +AA G WT EEH FL+ ++GK WKKI+ ++K+R+ QIRTHAQKYF KL + R G EG TM+G Sbjct: 77 QSAATEGAPGQAAASLAPGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEG 162
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|1210512502|dbj|GAX28359.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 85.5001 bits (210), Expect = 5.118e-14 Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 137 RTASTKGKDGASAARAKEGH----WTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDG 218 ++A+T+G G AA G WT EEH FL+ ++GK WKKI+ ++K+R+ QIRTHAQKYF KL + R G EG TM+G Sbjct: 78 QSATTEGASGQGAASLAPGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEG 163
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|298707767|emb|CBJ26084.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 85.1149 bits (209), Expect = 6.265e-14 Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 0 Query: 82 DWTTEEHARFLEGLKQYGRSWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTP---------PRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTK 201 +W +EH RF+EG+K YGRSW +++++ TRT ++ +A ++ +N P P+ A G W D+EHE F+K YG+SW ++++M TR+NEQ+R HA++Y K Sbjct: 172 EWEGDEHDRFMEGVKLYGRSWVDVASVVR-TRTNRQVIMHA-MHRLNDDLSSKPSLRACTSTGPQATDRAPPPAQPRAAVNGGDWGDDEHEAFMKGVKIYGRSWVSVARLMGTRTNEQVRAHAKQYLNK 298 HSP 2 Score: 67.781 bits (164), Expect = 2.152e-8 Identity = 39/143 (27.27%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 79 ASSDWTTEEHARFLEGLKQYGRSWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTPPRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKY----FTKLDQLRTCGYEGSYTMD 217 SS+W EEH RF++G +++G++W ++ ++ TR +++ Y++ ++ RT G + K G W +EH+ F++ YG+SW ++ V++TR+N Q+ HA + LR C G D Sbjct: 111 GSSEWDDEEHERFVKGFERHGKAWAEVAQVVR-TRDEGQVQGYSARWVT---------RTG------GLHESFRKIGEWEGDEHDRFMEGVKLYGRSWVDVASVVRTRTNRQVIMHAMHRLNDDLSSKPSLRACTSTGPQATD 237
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|585111934|gb|EWM29405.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 85.5001 bits (210), Expect = 9.056e-14 Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0 Query: 136 PRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDG 218 P T+ +D S+ R G W +EEH FLK YGKSWKKISQ++KTR+ QIRTHAQKY K+++ + G G+ M+G Sbjct: 143 PSTSPPSKRD--SSPRDSPGRWNEEEHLLFLKGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNG 223
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|219128113|ref|XP_002184266.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404497|gb|EEC44444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.8777 bits (198), Expect = 1.861e-12 Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 134 TPPRTASTKGKDGASAARAKE-GHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDG 218 TPP +T + + + G WT EEH FL+ ++GK WKKI+ ++K+R+ QIRTHAQKYF KL + R G EG M+G Sbjct: 96 TPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEG 181
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|219128116|ref|XP_002184267.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404498|gb|EEC44445.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 79.337 bits (194), Expect = 1.125e-11 Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 134 TPPRTASTKGKDGASAARAKE-GHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDG 218 TPP +T + + + G WT EEH FL+ ++GK WKKI+ ++K+R+ QIRTHAQKYF KL + R G EG M+G Sbjct: 96 TPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEG 181
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|1173946604|gb|OQR95117.1| (hypothetical protein ACHHYP_00385 [Achlya hypogyna]) HSP 1 Score: 73.559 bits (179), Expect = 1.486e-11 Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 145 DGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDGTRHL 222 D S + + G W EEH+ FL+ YGK+WKK++QV+ TRS QIRTHAQK+F ++ Q R ++ G +H+ Sbjct: 47 DDESPSTKRGGRWLAEEHQLFLEGLRAYGKNWKKVAQVVPTRSTVQIRTHAQKFFKRMSQERHLPLSPTHLGKGDQHI 124
BLAST of EWM24966.1 vs. NCBI_GenBank
Match: gi|585113115|gb|EWM30452.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 77.7962 bits (190), Expect = 2.204e-11 Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 0 Query: 150 ARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYT-MDGTR 220 R G WT EEH FLK +GK WKKI++++KTR+ QIRTHAQKYF KL + + G+ G M+GTR Sbjct: 96 GRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTR 167 The following BLAST results are available for this feature:
BLAST of EWM24966.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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