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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100122g18.3572.mrna |
| Orig protein id | gnl|cribi|Naga_100122g18.3572 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:602931..605164 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5695 ID=rna5695|Name=rna5695|organism=Nannochloropsis gaditana|type=mRNA|length=714bp
GTATTGATTTTGCAAGCGCGATCCTTTCCTCTTCCTTATTGATTGCACCG
CGACGTTGGATCGCACGCTAACCGTTACCGCACGCACTTTTACTGCACGC
TAATCGTTACCGCTCGCACTTTTACCCCTCTGTTCTGAAATGTTCTCGCA
CCATGGGTTAAGCTGTTTGAGTCCCAACTCATCATGTACGCATATACGTC
ATTGACCGTCATGAACTTCGTCGCGTCCTTCAATGCTTAATTAACCATTT
CCGCGGCTCGCATTAATATATGTTTATTACGTATATCATTCTTGCTTGCG
AATTTGTTTCCATCAGGATGCGACAGATTGCTGTGTGGGCCCGAAGATGG
ACAAGCAAGCAGAAGCCATCCTCTCAGCTACTGCTCTTACTTGGCTTGAT
CTTTTGCGCACAGCTGTATATCATTTTTCATTCTTCTTCCTCATCGTGCG
CTGGGAAGGAGCAACACGCGATTCCTACGCCCGCTTCATTGGCAGCATCA
CCATCTTCTTCCCCTACTGTGCCTCTCGAAGACCCACCTTTGCCGCGCTT
GTCGAAGCCTCTCATAGTGGCCTGTCTGGCCAATATGCGTACAGTGTCGA
CCACTGCTTATAATCTTGCACGCGTCCTCATGGAGCGCGTCGACTCGAAT
TCCGTTTCTGGATGGGAAAAGAACCCTATACAGGACGTCGCAGGGAAAAA
AAAAGAAGCTTTTA back to topprotein sequence of rna5695 >rna5695-protein ID=rna5695-protein|Name=rna5695|organism=Nannochloropsis gaditana|type=polypeptide|length=691bp
MRRGVSRILYEINNQEKVHDIYSPSDRVRWLVLGRKRRFKWCVVLLGGIT
LATFIIACTQFKLFEEDKSVIPLSTKAIIEVSSSSRKGNTRSNEESWETL
DQRKDEQPPVATFGTKHAETDNSARSDVNGEDAVASPRAGENTAMTGDYE
VDWNENEGLESKEDVQGSSSHKSTSKILGVAEESARINGRRRKKSRGRRI
TMEMAELFHPNENKDSGTGKMKIAPRSRIHIAIHHGKKRQKRTGVFKDDE
GKKIQREAQGEGERKEYKEPREEKQEYASSLSQHPPEEGAYPINSTSTSG
VTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYA
IKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEA
RGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYS
QHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRG
TDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQ
GRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVH
IPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQ
DKSLALATLGLSLPHDTDDVDSVLQEALTHSLRDSSEKNVI back to topmRNA from alignment at CM002466.1:602931..605164- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5695 ID=rna5695|Name=rna5695|organism=Nannochloropsis gaditana|type=mRNA|length=2234bp|location=Sequence derived from alignment at CM002466.1:602931..605164- (Nannochloropsis gaditana)
AAGACAGACGCCCTGTGGTGAATGTCCTGCATGTCACGACGACCTTAAAT
CTGTCATCACTTTTCTGGGCCGTTTCCCTCAGAAGGCAGCCGCTGCCTTT
AAGGCATTTCCACACTGATGCGTCGAGGTGTATCAAGGATTTTATACGAA
ATTAATAATCAAGAAAAAGTACATGATATTTACTCTCCCTCTGACCGTGT
ACGGTGGCTGGTGTTAGGGCGAAAAAGGCGCTTCAAATGGTGCGTCGTGC
TTCTGGGCGGCATCACGTTAGCTACATTCATAATAGCATGCACGCAATTT
AAACTATTCGAAGAAGACAAGTCCGTCATTCCACTCTCGACAAAGGCAAT
AATTGAAGTGTCATCGTCCTCGCGGAAAGGCAATACACGTAGCAATGAAG
AGTCTTGGGAGACGTTGGACCAAAGGAAGGACGAACAACCACCAGTTGCT
ACGTTTGGAACAAAGCATGCGGAGACAGATAATTCTGCACGGTCGGATGT
AAATGGAGAAGATGCAGTCGCAAGTCCTCGGGCGGGAGAAAATACGGCCA
TGACGGGTGATTATGAAGTCGATTGGAATGAAAATGAGGGTCTGGAAAGT
AAAGAAGACGTGCAGGGCAGTAGCTCTCACAAGTCAACATCAAAAATCTT
AGGTGTGGCGGAGGAAAGCGCGAGAATAAACGGAAGGAGAAGGAAGAAGA
GCAGAGGAAGGCGAATAACGATGGAAATGGCGGAGCTCTTCCACCCTAAT
GAAAATAAAGATTCAGGCACAGGGAAGATGAAGATTGCTCCGAGAAGCAG
AATTCATATAGCGATCCACCATGGTAAAAAAAGGCAAAAGAGGACTGGAG
TGTTCAAGGATGATGAGGGGAAAAAGATACAGCGTGAAGCACAAGGAGAG
GGTGAGAGAAAGGAGTACAAAGAACCCAGAGAGGAGAAGCAAGAATATGC
AAGCAGTTTGTCTCAACATCCACCTGAGGAGGGCGCATATCCAATAAATA
GCACCTCAACAAGTGGCGTCACGTCTTCCATAGATGCATTCAAGGATAGC
GGTGCCATTTCGGCAGGGAATCTACCGGAGGAAAGAGTACCAAACATGTT
GTATTGTCTACCCGGTGGGGGCTTCAACGATATCGCGGTGCAGCTTTGGC
GGTGTGTAGAGTACGCCATAAAGACTGAGCGTGTCATGATCCTTGGTTAC
GAAAACTACATTCCCGTCTTACCTCCGTACGAGCAATATTTCCGTCTGAA
AACAATCCCAGGGCTCTCACTTATGTCGCAGTGGGAAGCTGCCGATCGTA
TTCGCCATGCAGAGGCCAGGGGTCAGCGGGTGACGAAGGCCCATGGCAAG
CGACTTCCTATCAGCATGCTTCTGGGCAACGGCGAGGAAACGGAAGATGG
CCCTCCCTTCTTCATAGCCACCGCAAGCGTGCCGAATGTAGCCTTCAATC
CTGAGAAAAATTACTCACAGCACATCCTTGTTTACCATAAAAAAGGAAAT
CGAGGTACCCCGGAATCCACCATCCGCCACGTTCTCTTTTCAGAGGAAGT
GAAGCGAACATTCTTGCTTAGGTGGGGTCAAATTAGCAAGCCATACGTGG
GCATGCATGTGCGAGGAACAGATAGGAAATGCGGGAGGAAAAAAGCTCCG
CAGGTGATGCGGAAAGTTAAATTTCTGCGCAGGCGCCTCATCGGCGCCCC
TATATATCTAGCCACCGACAATCCAGAGGCGACGATAGAATACAGGGATG
AATTCGAGGACAATCAGGGCAGGAAGATATTTTCATTTACGTACTTCCCA
AGTCATCAAAAGGGTGTGGAAGAGCCCGTAAAGGACCGACGCATGTTCCT
ACACGACACGGGCACGGGACAGACAGATACCAATGAGCAAGGCCTTGCTG
GTGAGACGGATGTGCATATCCCTCTTCATTTGAATCAAGCGCTCAAGGCT
GAAGAAAAGCATCAGACAAATGTCGACGGCTTTGTGGACTTACTATTACT
GGCCTTCAGTAAAAGGTTCATAAAGTCCTGCGGAGGGTATTCCCAATTGG
CGAAGCTACTGCACCAGGACAAGAGCCTTGCCCTTGCGACTCTTGGTCTC
AGTCTTCCGCATGACACCGATGACGTAGACAGTGTGCTGCAAGAGGCACT
GACTCACAGCTTAAGGGATTCATCCGAGAAAAACGTTATATAAGAAAACA
AAAACGAGTCTTGAGGTAATAAGATATTCTCACA back to topCoding sequence (CDS) from alignment at CM002466.1:602931..605164- >rna5695 ID=rna5695|Name=rna5695|organism=Nannochloropsis gaditana|type=CDS|length=2076bp|location=Sequence derived from alignment at CM002466.1:602931..605164- (Nannochloropsis gaditana)
ATGCGTCGAGGTGTATCAAGGATTTTATACGAAATTAATAATCAAGAAAA
AGTACATGATATTTACTCTCCCTCTGACCGTGTACGGTGGCTGGTGTTAG
GGCGAAAAAGGCGCTTCAAATGGTGCGTCGTGCTTCTGGGCGGCATCACG
TTAGCTACATTCATAATAGCATGCACGCAATTTAAACTATTCGAAGAAGA
CAAGTCCGTCATTCCACTCTCGACAAAGGCAATAATTGAAGTGTCATCGT
CCTCGCGGAAAGGCAATACACGTAGCAATGAAGAGTCTTGGGAGACGTTG
GACCAAAGGAAGGACGAACAACCACCAGTTGCTACGTTTGGAACAAAGCA
TGCGGAGACAGATAATTCTGCACGGTCGGATGTAAATGGAGAAGATGCAG
TCGCAAGTCCTCGGGCGGGAGAAAATACGGCCATGACGGGTGATTATGAA
GTCGATTGGAATGAAAATGAGGGTCTGGAAAGTAAAGAAGACGTGCAGGG
CAGTAGCTCTCACAAGTCAACATCAAAAATCTTAGGTGTGGCGGAGGAAA
GCGCGAGAATAAACGGAAGGAGAAGGAAGAAGAGCAGAGGAAGGCGAATA
ACGATGGAAATGGCGGAGCTCTTCCACCCTAATGAAAATAAAGATTCAGG
CACAGGGAAGATGAAGATTGCTCCGAGAAGCAGAATTCATATAGCGATCC
ACCATGGTAAAAAAAGGCAAAAGAGGACTGGAGTGTTCAAGGATGATGAG
GGGAAAAAGATACAGCGTGAAGCACAAGGAGAGGGTGAGAGAAAGGAGTA
CAAAGAACCCAGAGAGGAGAAGCAAGAATATGCAAGCAGTTTGTCTCAAC
ATCCACCTGAGGAGGGCGCATATCCAATAAATAGCACCTCAACAAGTGGC
GTCACGTCTTCCATAGATGCATTCAAGGATAGCGGTGCCATTTCGGCAGG
GAATCTACCGGAGGAAAGAGTACCAAACATGTTGTATTGTCTACCCGGTG
GGGGCTTCAACGATATCGCGGTGCAGCTTTGGCGGTGTGTAGAGTACGCC
ATAAAGACTGAGCGTGTCATGATCCTTGGTTACGAAAACTACATTCCCGT
CTTACCTCCGTACGAGCAATATTTCCGTCTGAAAACAATCCCAGGGCTCT
CACTTATGTCGCAGTGGGAAGCTGCCGATCGTATTCGCCATGCAGAGGCC
AGGGGTCAGCGGGTGACGAAGGCCCATGGCAAGCGACTTCCTATCAGCAT
GCTTCTGGGCAACGGCGAGGAAACGGAAGATGGCCCTCCCTTCTTCATAG
CCACCGCAAGCGTGCCGAATGTAGCCTTCAATCCTGAGAAAAATTACTCA
CAGCACATCCTTGTTTACCATAAAAAAGGAAATCGAGGTACCCCGGAATC
CACCATCCGCCACGTTCTCTTTTCAGAGGAAGTGAAGCGAACATTCTTGC
TTAGGTGGGGTCAAATTAGCAAGCCATACGTGGGCATGCATGTGCGAGGA
ACAGATAGGAAATGCGGGAGGAAAAAAGCTCCGCAGGTGATGCGGAAAGT
TAAATTTCTGCGCAGGCGCCTCATCGGCGCCCCTATATATCTAGCCACCG
ACAATCCAGAGGCGACGATAGAATACAGGGATGAATTCGAGGACAATCAG
GGCAGGAAGATATTTTCATTTACGTACTTCCCAAGTCATCAAAAGGGTGT
GGAAGAGCCCGTAAAGGACCGACGCATGTTCCTACACGACACGGGCACGG
GACAGACAGATACCAATGAGCAAGGCCTTGCTGGTGAGACGGATGTGCAT
ATCCCTCTTCATTTGAATCAAGCGCTCAAGGCTGAAGAAAAGCATCAGAC
AAATGTCGACGGCTTTGTGGACTTACTATTACTGGCCTTCAGTAAAAGGT
TCATAAAGTCCTGCGGAGGGTATTCCCAATTGGCGAAGCTACTGCACCAG
GACAAGAGCCTTGCCCTTGCGACTCTTGGTCTCAGTCTTCCGCATGACAC
CGATGACGTAGACAGTGTGCTGCAAGAGGCACTGACTCACAGCTTAAGGG
ATTCATCCGAGAAAAACGTTATATAA back to top
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