EWM24985.1, cds5680 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24985.1 vs. NCBI_GenBank
Match: gi|585106618|gb|EWM24985.1| (hypothetical protein Naga_100122g18 [Nannochloropsis gaditana]) HSP 1 Score: 1438.71 bits (3723), Expect = 0.000e+0 Identity = 691/691 (100.00%), Postives = 691/691 (100.00%), Query Frame = 0 Query: 1 MRRGVSRILYEINNQEKVHDIYSPSDRVRWLVLGRKRRFKWCVVLLGGITLATFIIACTQFKLFEEDKSVIPLSTKAIIEVSSSSRKGNTRSNEESWETLDQRKDEQPPVATFGTKHAETDNSARSDVNGEDAVASPRAGENTAMTGDYEVDWNENEGLESKEDVQGSSSHKSTSKILGVAEESARINGRRRKKSRGRRITMEMAELFHPNENKDSGTGKMKIAPRSRIHIAIHHGKKRQKRTGVFKDDEGKKIQREAQGEGERKEYKEPREEKQEYASSLSQHPPEEGAYPINSTSTSGVTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEALTHSLRDSSEKNVI 691 MRRGVSRILYEINNQEKVHDIYSPSDRVRWLVLGRKRRFKWCVVLLGGITLATFIIACTQFKLFEEDKSVIPLSTKAIIEVSSSSRKGNTRSNEESWETLDQRKDEQPPVATFGTKHAETDNSARSDVNGEDAVASPRAGENTAMTGDYEVDWNENEGLESKEDVQGSSSHKSTSKILGVAEESARINGRRRKKSRGRRITMEMAELFHPNENKDSGTGKMKIAPRSRIHIAIHHGKKRQKRTGVFKDDEGKKIQREAQGEGERKEYKEPREEKQEYASSLSQHPPEEGAYPINSTSTSGVTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEALTHSLRDSSEKNVI Sbjct: 1 MRRGVSRILYEINNQEKVHDIYSPSDRVRWLVLGRKRRFKWCVVLLGGITLATFIIACTQFKLFEEDKSVIPLSTKAIIEVSSSSRKGNTRSNEESWETLDQRKDEQPPVATFGTKHAETDNSARSDVNGEDAVASPRAGENTAMTGDYEVDWNENEGLESKEDVQGSSSHKSTSKILGVAEESARINGRRRKKSRGRRITMEMAELFHPNENKDSGTGKMKIAPRSRIHIAIHHGKKRQKRTGVFKDDEGKKIQREAQGEGERKEYKEPREEKQEYASSLSQHPPEEGAYPINSTSTSGVTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEALTHSLRDSSEKNVI 691
BLAST of EWM24985.1 vs. NCBI_GenBank
Match: gi|585106121|gb|EWM24604.1| (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana]) HSP 1 Score: 270.396 bits (690), Expect = 3.618e-76 Identity = 160/443 (36.12%), Postives = 238/443 (53.72%), Query Frame = 0 Query: 268 KEPREEKQEYASSLSQHPPEEGAYPINSTSTSG---------VTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLP--ISMLLGNGEETEDGP-------PFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIG-----APIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQ----------GLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEA 677 K R +E S + +H GA+ + S +G +++ DA+ D A S P ++ +CL GG NDI V++W+C+E+A T+RV++L +ENY PV P+ YF L+TIPGL M+ ++AA I H RG R RL + LLG D P PF + ++ F E Y Q ++V+H++GN G+ +RH+ F+E ++ TFL RW ++ KPYV +H+R TD+ C +K + R ++ L R PIY+A+D+PE ++R+E E+ Q R++ SFTY P PV ++R LH+ D +EQ G+ G LHL+ L +EKHQTN+D FVDLLLLA S+ + SCGGYS LA+ LHQ++ + + LGL P DD+D +L+ A Sbjct: 378 KRERLASKEARSHIRRHQQGRGAWEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKY---FFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLRTMTPYQAATAINH---RG-RAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEK---MERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHP--------PVHEQRNALHE------DPDEQKMKEMRRHSLGIEG-------LHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAA 789 The following BLAST results are available for this feature:
BLAST of EWM24985.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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