EWM24985.1, cds5680 (CDS) Nannochloropsis gaditana

Overview
NameEWM24985.1
Unique Namecds5680
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:602972..605047 -

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Properties
Property NameValue
Protein idEWM24985.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100122g18.3572.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:602972..605047 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM24985.1 vs. NCBI_GenBank
Match: gi|585106618|gb|EWM24985.1| (hypothetical protein Naga_100122g18 [Nannochloropsis gaditana])

HSP 1 Score: 1438.71 bits (3723), Expect = 0.000e+0
Identity = 691/691 (100.00%), Postives = 691/691 (100.00%), Query Frame = 0
Query:    1 MRRGVSRILYEINNQEKVHDIYSPSDRVRWLVLGRKRRFKWCVVLLGGITLATFIIACTQFKLFEEDKSVIPLSTKAIIEVSSSSRKGNTRSNEESWETLDQRKDEQPPVATFGTKHAETDNSARSDVNGEDAVASPRAGENTAMTGDYEVDWNENEGLESKEDVQGSSSHKSTSKILGVAEESARINGRRRKKSRGRRITMEMAELFHPNENKDSGTGKMKIAPRSRIHIAIHHGKKRQKRTGVFKDDEGKKIQREAQGEGERKEYKEPREEKQEYASSLSQHPPEEGAYPINSTSTSGVTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEALTHSLRDSSEKNVI 691
            MRRGVSRILYEINNQEKVHDIYSPSDRVRWLVLGRKRRFKWCVVLLGGITLATFIIACTQFKLFEEDKSVIPLSTKAIIEVSSSSRKGNTRSNEESWETLDQRKDEQPPVATFGTKHAETDNSARSDVNGEDAVASPRAGENTAMTGDYEVDWNENEGLESKEDVQGSSSHKSTSKILGVAEESARINGRRRKKSRGRRITMEMAELFHPNENKDSGTGKMKIAPRSRIHIAIHHGKKRQKRTGVFKDDEGKKIQREAQGEGERKEYKEPREEKQEYASSLSQHPPEEGAYPINSTSTSGVTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEALTHSLRDSSEKNVI
Sbjct:    1 MRRGVSRILYEINNQEKVHDIYSPSDRVRWLVLGRKRRFKWCVVLLGGITLATFIIACTQFKLFEEDKSVIPLSTKAIIEVSSSSRKGNTRSNEESWETLDQRKDEQPPVATFGTKHAETDNSARSDVNGEDAVASPRAGENTAMTGDYEVDWNENEGLESKEDVQGSSSHKSTSKILGVAEESARINGRRRKKSRGRRITMEMAELFHPNENKDSGTGKMKIAPRSRIHIAIHHGKKRQKRTGVFKDDEGKKIQREAQGEGERKEYKEPREEKQEYASSLSQHPPEEGAYPINSTSTSGVTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEALTHSLRDSSEKNVI 691          
BLAST of EWM24985.1 vs. NCBI_GenBank
Match: gi|585106121|gb|EWM24604.1| (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana])

HSP 1 Score: 270.396 bits (690), Expect = 3.618e-76
Identity = 160/443 (36.12%), Postives = 238/443 (53.72%), Query Frame = 0
Query:  268 KEPREEKQEYASSLSQHPPEEGAYPINSTSTSG---------VTSSIDAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLP--ISMLLGNGEETEDGP-------PFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIG-----APIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQ----------GLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEA 677
            K  R   +E  S + +H    GA+  +  S +G         +++  DA+ D  A S    P ++     +CL  GG NDI V++W+C+E+A  T+RV++L +ENY PV  P+  YF L+TIPGL  M+ ++AA  I H   RG R       RL   +  LLG      D P       PF      + ++ F  E  Y Q ++V+H++GN G+    +RH+ F+E ++ TFL RW ++ KPYV +H+R TD+ C  +K   + R ++ L R          PIY+A+D+PE   ++R+E E+ Q R++ SFTY P        PV ++R  LH+      D +EQ          G+ G       LHL+  L  +EKHQTN+D FVDLLLLA S+  + SCGGYS LA+ LHQ++ +  + LGL  P   DD+D +L+ A
Sbjct:  378 KRERLASKEARSHIRRHQQGRGAWEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKY---FFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLRTMTPYQAATAINH---RG-RAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEK---MERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHP--------PVHEQRNALHE------DPDEQKMKEMRRHSLGIEG-------LHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAA 789          
The following BLAST results are available for this feature:
BLAST of EWM24985.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585106618|gb|EWM24985.1|0.000e+0100.00hypothetical protein Naga_100122g18 [Nannochlorops... [more]
gi|585106121|gb|EWM24604.1|3.618e-7636.12hypothetical protein Naga_100171g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5695rna5695Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications