EWM25009.1, cds5651 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|585106644|gb|EWM25009.1| (DNA-binding SAP [Nannochloropsis gaditana]) HSP 1 Score: 497.278 bits (1279), Expect = 1.537e-177 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query: 1 MDLDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEEARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGATTS 258
MDLDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEEARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGATTS
Sbjct: 1 MDLDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEEARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGATTS 258
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|673022850|ref|XP_008865386.1| (hypothetical protein H310_03347 [Aphanomyces invadans] >gi|574478614|gb|ETW05609.1| hypothetical protein H310_03347 [Aphanomyces invadans]) HSP 1 Score: 101.293 bits (251), Expect = 6.022e-22 Identity = 95/281 (33.81%), Postives = 134/281 (47.69%), Query Frame = 0
Query: 3 LDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPA--PVPASHTKTAPSPQPRAPFHEN------SAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEEARRRARAARFGIP---DPKLEEEKKAERARRFADPAKLEE----------------EAKKKARMERFGAT 256
L+ KK+KV+++++EL+KRGL G K EL +RL+ A+D E +D + A+ AP + + + PS +P A SA S A + PT + P+A P + +EEEKKRRRAE+FGIPLSEE K RA+RF + + S LL P GV V ++A+++ RA RFG+P D + EEKKA RA RF A+ E+ +AKKK R+ERFG +
Sbjct: 4 LNPKKMKVNEIKDELAKRGLSQTGLKPELIQRLELALDEEEFGGLDVPESSPVSTAVAVVENEVAPTVVMKKTDSIRSLLNDDTPSAEPAATALAKAAVGKPSATSTVAPTAKPTVKKTDVSPPSATIVANTPKAI-----SEEEKKRRRAEKFGIPLSEEQKILERAKRFQLPSMKSDDFSALLTD----------NP--GVHVDKVLDDAKKQDRAKRFGLPVALDASMLEEKKAARASRFGMNAEAEKKLKRAMRFNLETPETVDAKKKQRLERFGLS 267
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|698781331|ref|XP_009823709.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574121433|gb|ETV86910.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 97.0561 bits (240), Expect = 1.784e-20 Identity = 100/281 (35.59%), Postives = 132/281 (46.98%), Query Frame = 0
Query: 3 LDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAAL------------------------PPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPV-VDAAE-EARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGATT 257
L+ KK+KV+++++EL+KRGL G K EL +RL+ A+D E +D D P AA+ S P +A P + PS A N APT PA P A+V T A +EEEKKR RAE+FGIPLSEE K RA+RF + K A +SK +A G+PV VDA + E ++ ARA RFG+ E++KK +RA RF +AKKK R ERFG +T
Sbjct: 4 LNPKKMKVNEIKDELAKRGLSQAGLKPELIQRLELALDEEEFGGMDGPD--STPVSAAVEVEKVAAPAPVAKKADSIRNLLNDDSSSVQSPVVAAVSAPVNVAVVEPSTTTTATSASN---------VAPTEVPA--PVIASVVDNTPKAI------SEEEKKRLRAEKFGIPLSEEQKILERAKRFQLPN----------KHADDSKKQDRAKRF-GLPVAVDAGQLEEKKAARANRFGL---NAEDDKKLKRAMRFNMETSETIDAKKKQRSERFGLST 251
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|673022852|ref|XP_008865387.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574478615|gb|ETW05610.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 95.5153 bits (236), Expect = 6.278e-20 Identity = 93/264 (35.23%), Postives = 133/264 (50.38%), Query Frame = 0
Query: 3 LDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPA--PVPASHTKTAPSPQPRAPFHEN------SAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPV-VDAAE-EARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGAT 256
L+ KK+KV+++++EL+KRGL G K EL +RL+ A+D E +D + A+ AP + + + PS +P A SA S A + PT + P+A P + +EEEKKRRRAE+FGIPLSEE K RA+RF + + +L A K +A G+PV +DA+ E ++ ARA+RFG+ E EKK +RA RF +AKKK R+ERFG +
Sbjct: 4 LNPKKMKVNEIKDELAKRGLSQTGLKPELIQRLELALDEEEFGGLDVPESSPVSTAVAVVENEVAPTVVMKKTDSIRSLLNDDTPSAEPAATALAKAAVGKPSATSTVAPTAKPTVKKTDVSPPSATIVANTPKAI-----SEEEKKRRRAEKFGIPLSEEQKILERAKRFQL-------PNKVLDDA---KKQDRAKRF-GLPVALDASMLEEKKAARASRFGM---NAEAEKKLKRAMRFNLETPETVDAKKKQRLERFGLS 248
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|698781329|ref|XP_009823708.1| (hypothetical protein H257_01941 [Aphanomyces astaci] >gi|574121432|gb|ETV86909.1| hypothetical protein H257_01941 [Aphanomyces astaci]) HSP 1 Score: 95.5153 bits (236), Expect = 1.010e-19 Identity = 105/295 (35.59%), Postives = 139/295 (47.12%), Query Frame = 0
Query: 3 LDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAAL------------------------PPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANAT-----ASNLL---------KGAIESKGTSKAGPLQGVPV-VDAAE-EARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGATT 257
L+ KK+KV+++++EL+KRGL G K EL +RL+ A+D E +D D P AA+ S P +A P + PS A N APT PA P A+V T A +EEEKKR RAE+FGIPLSEE K RA+RF + P+ T A+ LL K A +SK +A G+PV VDA + E ++ ARA RFG+ E++KK +RA RF +AKKK R ERFG +T
Sbjct: 4 LNPKKMKVNEIKDELAKRGLSQAGLKPELIQRLELALDEEEFGGMDGPD--STPVSAAVEVEKVAAPAPVAKKADSIRNLLNDDSSSVQSPVVAAVSAPVNVAVVEPSTTTTATSASN---------VAPTEVPA--PVIASVVDNTPKAI------SEEEKKRLRAEKFGIPLSEEQKILERAKRFQL--PSMRTDDDDAAAPLLTDKSVVHVDKHADDSKKQDRAKRF-GLPVAVDAGQLEEKKAARANRFGL---NAEDDKKLKRAMRFNMETSETIDAKKKQRSERFGLST 273
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|1173953932|gb|OQS01438.1| (hypothetical protein ACHHYP_00745 [Achlya hypogyna]) HSP 1 Score: 93.2041 bits (230), Expect = 2.486e-19 Identity = 91/263 (34.60%), Postives = 128/263 (48.67%), Query Frame = 0
Query: 3 LDLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAP-PALAPAPVPASHTKTA-----------PSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEEARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERF 253
L+ KK+KV ++++EL+KRGL T G K EL +RL+ A+D +EE A A+ A+P P PV AS P P+P+ ++ PT A++P AA+ TEEEK++ RA +FGIPL++E KK RA+RF V P ATA + +E + SK GV D +E +++AR RFGI D + +KK ERA RF K + K + R ERF
Sbjct: 4 LNPKKMKVAEIKDELTKRGLSTAGVKAELTQRLELALD-------EEEFGAEAHDQASFGAAEASPEPETTTTPVAASPEPEPEAAKAAEVAEDPVPEPK-------------TTSTPTKPVAAVPVTAAM--------------TEEEKRKARAAKFGIPLTDEQKKSERAKRFQV--PGAATAVD---NYVELQKKSKRAERFGVETEDKMQE-KKKARGERFGITD---DAKKKLERALRFNLMTKEVVDEKLQQRRERF 223
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|971511493|dbj|GAQ86729.1| (hypothetical protein KFL_003070170 [Klebsormidium nitens]) HSP 1 Score: 89.7373 bits (221), Expect = 5.538e-18 Identity = 102/271 (37.64%), Postives = 131/271 (48.34%), Query Frame = 0
Query: 4 DLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIP--LSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEE--ARRRARAARFGIP------------DPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGATTS 258
D KKLKV +L++EL+KRGL G K L ERL+ A D E D V A PP +K + P P A + AAS + S+ TPAA A T + +KK++RAERFG+P LS+E K K RAERFG+ K A + GA + G +K+ P +EE A+++ARA RFGIP DP +E+KK +RA RFA E+E KKKAR ERF AT S
Sbjct: 5 DYKKLKVQELKDELAKRGLAVDGLKAMLVERLEAA------DKESESDKVAQGGSAEAPP-----------------SKQSSDPMP--------ATTNQAASEGGQAEGLSLETPAA---KAAAPGPAATAPSAIDKKKQRAERFGVPVALSDEEKLKLRAERFGIQKAGGAN-TGKADGAKGANGVAKSAP---------SEEDIAKKKARAERFGIPVAAENGASKGTADPDADEKKK-KRAERFAS----EDEQKKKARAERF-ATAS 225
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|813111649|ref|XP_012195223.1| (hypothetical protein SPRG_19024 [Saprolegnia parasitica CBS 223.65] >gi|641540392|gb|KDO34174.1| hypothetical protein SPRG_19024 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 87.4261 bits (215), Expect = 3.918e-17 Identity = 90/258 (34.88%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 6 KKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAP-PALAPAPV--PASHTKTAPSPQPRA-----PFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEEARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGA 255
KK+KV ++++EL+KR L T G K EL +RL+ A+D +EE A A L A+P ++ P PV PA A SP A P E AP+S+P AA T +EEEK++ RA +FGIPL+E+ +K RA+RF +AT +E+ SK GV D A+++AR RFGI D + +KK ERA RF K + K K R RF A
Sbjct: 7 KKMKVAEIKDELAKRSLSTAGVKAELVQRLELALD-------EEEFGSEAHEQATLAAAEASPIESVTPEPVEEPAQEVAKAASPAKHAEPVPEPIKE---------------APSSVPVVAAAPATVGM--------SEEEKRKARAAKFGIPLTEDQRKMERAQRFKAAGAVDAT--------VETAKKSKRAERFGVETDDKV-HAQKKARGERFGITD---DSKKKLERALRFNLVTKEVVDEKLKQRQARFAA 222
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|669152994|ref|XP_008612059.1| (hypothetical protein SDRG_07973 [Saprolegnia diclina VS20] >gi|530736411|gb|EQC34653.1| hypothetical protein SDRG_07973 [Saprolegnia diclina VS20]) HSP 1 Score: 86.6557 bits (213), Expect = 6.640e-17 Identity = 84/250 (33.60%), Postives = 120/250 (48.00%), Query Frame = 0
Query: 6 KKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAIESKGTSKAGPLQGVPVVDAAEEARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGA 255
KK+KV ++++EL+KRGL T G K EL +RL+ A+D E + E A A+ P+ +A P P PA SP P H + +AP ++ TEEEK++ RA +FGIPL+E+ +K RA+RF +K A A + +E+ SK G+ D +A+++AR RFGI D + +KK ERA RF K + K K R ERF A
Sbjct: 7 KKMKVAEIKDELAKRGLSTVGVKAELVQRLELALDEEEFGSEAHEQATLAAAEAS--PIGSATPE--PVEEPAQEAPKEASP----PKHAEPVPELVKDAPVVAAAPVTVGM------------------TEEEKRKARAAKFGIPLTEDQRKMERAQRFNALKAAGA-----VDATVETVKKSKRAERFGIESDDKV-QAQKKARGERFGITD---DSKKKLERALRFNLVTKEVVDEKLKQRQERFAA 221
BLAST of EWM25009.1 vs. NCBI_GenBank
Match: gi|633912689|gb|KDD76503.1| (hypothetical protein H632_c202p0 [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 80.8777 bits (198), Expect = 9.924e-15 Identity = 88/257 (34.24%), Postives = 116/257 (45.14%), Query Frame = 0
Query: 4 DLKKLKVDQLREELSKRGLDTKGKKDELQERLQNAIDTEMLDAIDEEDDVGAPPPAALPPLSAAPPALAPAPVPASHTKTAPSPQPRAPFHENSAASETAASTAPTSAPASMPTPAAVTGTTAPASQDKTEETEEEKKRRRAERFGIPLSEEAKKKARAERFGVVKPANATASNLLKGAI---ESKGTSKAGPLQGVPVVDAAEE--ARRRARAARFGIPDPKLEEEKKAERARRFADPAKLEEEAKKKARMERFGA 255
DLKKLKV +LR+EL+KR L+TKG KDEL RL ++ E DA P P P A+PPA AAST PA P AAV AP + +E +K + RAERFG+P++E AK K PA +++ L A E + K G+PV EE A+++ RAA+FG+P P +E EEEAK+++R RFGA
Sbjct: 6 DLKKLKVAELRDELTKRDLETKGVKDELIARLWESMSAEQPDA-------STPAPENAPDPVASPPA-----------------------------EHLAASTTEADVPA--PAKAAVEAIPAPP----VKLSEADKSKLRAERFGLPVAEGAKDK----------PAASSSVGSLGKAETQEEMERRKKRAERFGMPVPMTKEEEWAKKKQRAAKFGLPAPVFKE----------------EEEAKRQSRQNRFGA 194 The following BLAST results are available for this feature:
BLAST of EWM25009.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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