EWM25029.1, cds5626 (CDS) Nannochloropsis gaditana

Overview
NameEWM25029.1
Unique Namecds5626
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:469236..469319 +
Alignment locationCM002466.1:469377..469456 +
Alignment locationCM002466.1:469533..469820 +
Alignment locationCM002466.1:469864..470047 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25029.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100049g25.2088.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:469236..469319 +
CM002466.1supercontigCM002466.1:469377..469456 +
CM002466.1supercontigCM002466.1:469533..469820 +
CM002466.1supercontigCM002466.1:469864..470047 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25029.1 vs. NCBI_GenBank
Match: gi|585106665|gb|EWM25029.1| (hypothetical protein Naga_100049g25 [Nannochloropsis gaditana])

HSP 1 Score: 431.024 bits (1107), Expect = 8.223e-153
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 
Query:    1 MQYMDVCEKSRCRNGSGWSKYAVCEESSGHETAWDHSLWGELGRREEGGVCTEQRKQSIAHLRSRTTIEWMYQERCKRQVIYHKKLGLEGEGGTERARKESTVMEMDLMYGMPWGSMHLGKYAFGGATREILSSGSSCRNSSKPGIYQGFIRRKGRRRSDGAYASWRFCLRFCEVLSQIGMASASGSVRGLVILKCFPAGGWGIPCCIFYL 211
            MQYMDVCEKSRCRNGSGWSKYAVCEESSGHETAWDHSLWGELGRREEGGVCTEQRKQSIAHLRSRTTIEWMYQERCKRQVIYHKKLGLEGEGGTERARKESTVMEMDLMYGMPWGSMHLGKYAFGGATREILSSGSSCRNSSKPGIYQGFIRRKGRRRSDGAYASWRFCLRFCEVLSQIGMASASGSVRGLVILKCFPAGGWGIPCCIFYL
Sbjct:    1 MQYMDVCEKSRCRNGSGWSKYAVCEESSGHETAWDHSLWGELGRREEGGVCTEQRKQSIAHLRSRTTIEWMYQERCKRQVIYHKKLGLEGEGGTERARKESTVMEMDLMYGMPWGSMHLGKYAFGGATREILSSGSSCRNSSKPGIYQGFIRRKGRRRSDGAYASWRFCLRFCEVLSQIGMASASGSVRGLVILKCFPAGGWGIPCCIFYL 211
The following BLAST results are available for this feature:
BLAST of EWM25029.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106665|gb|EWM25029.1|8.223e-153100.00hypothetical protein Naga_100049g25 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5641rna5641Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications