EWM25034.1, cds5624 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|585106670|gb|EWM25034.1| (pyridoxamine 5 -phosphate oxidase [Nannochloropsis gaditana]) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 Query: 1 MNGMTHSLIFFPHLFPLQDENLPMRGERRTPVFFFKVNAAATLLIIVCCMLRPTHSYTRRALAFLALPNRSHFCTASLSRSFTSRSMSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 MNGMTHSLIFFPHLFPLQDENLPMRGERRTPVFFFKVNAAATLLIIVCCMLRPTHSYTRRALAFLALPNRSHFCTASLSRSFTSRSMSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP Sbjct: 1 MNGMTHSLIFFPHLFPLQDENLPMRGERRTPVFFFKVNAAATLLIIVCCMLRPTHSYTRRALAFLALPNRSHFCTASLSRSFTSRSMSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|873238650|emb|CEL95653.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 240.736 bits (613), Expect = 7.758e-75 Identity = 123/250 (49.20%), Postives = 167/250 (66.80%), Query Frame = 0 Query: 84 SRSMSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYT--LEEDKAGRIWKLTRLQP 331 S ++ ++ LRKEYS GL E +MP++PL++F +W ++A V EPNAMCLST S +G+PS RFVLLKG D+RGF ++TNY+SRKG +L + PFA+LTFWW LERS+R+EG V+++ E S AYF SRP+ SR+GA AS+QSRPI SR LE++++ + R+ G +P+P WGGFRLVP R+EFWKGR+SRLHDRL+YT E + G W++ R+QP Sbjct: 50 SNNLERISALRKEYSMKGLDEASMPADPLTLFGEWFEDAKTVSV-EPNAMCLSTASKEGRPSARFVLLKGYDERGFVFYTNYESRKGKEL----------------------TENPFASLTFWWEALERSIRIEGRVQQVPPEESDAYFTSRPKASRLGAIASDQSRPIASREALEAKWSELEGRYEG------TAEVPRPLHWGGFRLVPSRIEFWKGRESRLHDRLVYTRGEGEGEGGGEWRIERMQP 270
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|545713777|ref|XP_005709191.1| (pyridoxamine 5'-phosphate oxidase isoform 1 [Galdieria sulphuraria] >gi|545713779|ref|XP_005709192.1| pyridoxamine 5'-phosphate oxidase isoform 2 [Galdieria sulphuraria] >gi|452825676|gb|EME32671.1| pyridoxamine 5'-phosphate oxidase isoform 1 [Galdieria sulphuraria] >gi|452825677|gb|EME32672.1| pyridoxamine 5'-phosphate oxidase isoform 2 [Galdieria sulphuraria]) HSP 1 Score: 252.292 bits (643), Expect = 6.514e-74 Identity = 123/249 (49.40%), Postives = 160/249 (64.26%), Query Frame = 0 Query: 89 SVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEED------KAGRIWKLTRLQP 331 +VA LR+EYS++GL E + +P ++FRQWL+EAVAAQV EPNAMCL+TV G+PS R+VLLKG D+RGF W+TNY SRK L + PFAALTFWWGDLERSVRVEG V ++S S +YF SRP SR+ A SEQS+P+ SRS+LE ++ ++ +G + + IP+P WGG+RLVP+ +EFWKG + RLHDR+ Y E D +W+ RLQP Sbjct: 554 TVASLREEYSSTGLDESTLTEDPFTLFRQWLEEAVAAQVREPNAMCLATVDQSGRPSNRYVLLKGFDNRGFVWYTNYTSRKAQHL----------------------ESNPFAALTFWWGDLERSVRVEGKVFKVSSSESDSYFVSRPVKSRLAAIVSEQSKPVSSRSELEKKFQDLALYYGLQTDGTCSESIPRPETWGGYRLVPDSIEFWKGMRDRLHDRIKYVREVDWSSDNELKNSLWQRYRLQP 780
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|655007925|ref|WP_028456996.1| (pyridoxamine 5'-phosphate oxidase [Chloroflexus sp. Y-396-1]) HSP 1 Score: 235.728 bits (600), Expect = 8.002e-74 Identity = 122/243 (50.21%), Postives = 161/243 (66.26%), Query Frame = 0 Query: 89 SVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 S+ADLRKEY+ GL E +P+ F +W DEA+AA ++EPNAM L+T+ DG+PS R VLLKG+D+RGF +FTNY+SRKG LA V PAV AL F+W +LER VRVEG+ E++S+E + AY+ +RPR SRIGAWAS QSRPI R++LE + A ++ARF ++ P+P WGG+R++PER+EFW+GR SRLHDRL YT +D W+ RL P Sbjct: 2 SLADLRKEYTQRGLSEAEADPDPIVQFMRWFDEALAAGLIEPNAMTLATIDPDGRPSARMVLLKGVDERGFVFFTNYESRKGQALA---VNPAV-------------------ALVFYWPELERQVRVEGYAEKVSDEEADAYYATRPRDSRIGAWASPQSRPIADRAELEQRVAEIAARFADQDP-------PRPPFWGGYRVIPERIEFWQGRPSRLHDRLCYTRRDDG----WQRERLAP 211
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|670510916|ref|WP_031458676.1| (pyridoxamine 5'-phosphate oxidase [Chloroflexus sp. MS-G]) HSP 1 Score: 234.958 bits (598), Expect = 1.828e-73 Identity = 119/243 (48.97%), Postives = 162/243 (66.67%), Query Frame = 0 Query: 89 SVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 ++ADLRKEY+ GL E + +P+ F +W DEAVAA ++EPNAM L+T+ DG+PS R VLLKG+D+RGF +FTNY+SRKG +A V PAV AL F+W +LER VR+EG+ E++S+E + AY+ +RPR SRIGAWAS QSRPI R++LE + A ++ARF ++ P+P WGG+R++P+R+EFW+GR SRLHDRL YT +D W+ RL P Sbjct: 2 NLADLRKEYTQRGLSEADADPDPIVQFMRWFDEAVAAGLIEPNAMTLATIDPDGRPSARMVLLKGVDERGFVFFTNYESRKGQAMA---VHPAV-------------------ALVFYWPELERQVRIEGYAEKVSDEEADAYYATRPRDSRIGAWASPQSRPIADRAELEQRVAEIAARFADQDP-------PRPPFWGGYRVIPDRIEFWQGRPSRLHDRLCYTRHDDG----WQRERLAP 211
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|519048726|ref|WP_020204601.1| (MULTISPECIES: pyridoxamine 5'-phosphate oxidase [Cupriavidus]) HSP 1 Score: 233.417 bits (594), Expect = 6.450e-73 Identity = 122/245 (49.80%), Postives = 158/245 (64.49%), Query Frame = 0 Query: 87 MSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 M+ +ADLR+ Y L E ++ ++P+S F++W DEA+ A++ EPNAM L+TV +DG+PS R VLLKG+D GFT+FTNY+SRKG D+AG P AAL F W LER VRVEG VE++S+ S AY+ SRP GSR+GAWASEQSR + R+ LE + A ARFG P+PA WGG+RLVP R+EFW+GR SRLHDR+ Y L+ D A W++ RL P Sbjct: 1 MTQLADLRRTYVLGSLSESDVATDPISQFQRWFDEAIHAKLPEPNAMTLATVDTDGQPSARIVLLKGMDASGFTFFTNYESRKGLDMAGNPR----------------------AALLFHWVQLERQVRVEGTVEKVSDAESDAYYASRPLGSRLGAWASEQSREVADRAVLEQREADFRARFGDNP--------PRPAHWGGYRLVPSRIEFWQGRPSRLHDRIAYRLQADGA---WQIVRLSP 212
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|737897591|ref|WP_035863996.1| (pyridoxamine 5'-phosphate oxidase [Cupriavidus sp. SK-3] >gi|645571455|gb|KDP87620.1| pyridoxine 5'-phosphate oxidase [Cupriavidus sp. SK-3]) HSP 1 Score: 233.417 bits (594), Expect = 7.429e-73 Identity = 121/245 (49.39%), Postives = 159/245 (64.90%), Query Frame = 0 Query: 87 MSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 M+ +ADLR+ Y L E ++ S+P+S F++W DEA+ A++ EPNAM L+TV +DG+PS R VLLKG+D +GFT+FTNY+SRKG D+A A P AAL F W LER VRVEG VE+++E S AY+ +RP GSR+GAWASEQSR + R+ LE + A A+FG P+PA WGG+RLVP R+EFW+GR SRLHDR+ Y L+ D A W++ RL P Sbjct: 1 MTQLADLRRTYVLGSLSESDVASDPISQFQRWFDEAIHAKLPEPNAMTLATVDADGQPSARIVLLKGMDAKGFTFFTNYESRKGLDIA----------------------ANPRAALLFHWVQLERQVRVEGRVEKVTETESDAYYATRPLGSRLGAWASEQSREVADRTVLEQREADFRAKFGDNP--------PRPAHWGGYRLVPTRIEFWQGRPSRLHDRIAYRLQADGA---WRIVRLSP 212
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|1082804808|gb|OGB20791.1| (pyridoxamine 5'-phosphate oxidase [Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36]) HSP 1 Score: 232.261 bits (591), Expect = 1.932e-72 Identity = 120/243 (49.38%), Postives = 162/243 (66.67%), Query Frame = 0 Query: 89 SVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 S+ADLR EY+ + L E ++ ++P++ F +W D+A+ AQ+ E NAM L+TVS++G+PS R VLLKG D RGFTWFT+Y SRKG DL S P+AAL F+W LER V +EG VER+S S YFD RP SRIGA AS+QS+P+ R LE+++A VSA+ G HP P+P +WGG+RL+P+R+EFW+GR+SRLHDR+ YTL+ + A W++ RLQP Sbjct: 2 SIADLRTEYTLASLTEADVAADPIAQFSKWFDQALQAQLAEANAMSLATVSAEGRPSSRIVLLKGFDHRGFTWFTSYDSRKGQDL----------------------SVNPYAALLFFWSGLERQVHIEGRVERVSAAESDEYFDIRPLKSRIGAIASDQSKPVDDRLVLETRFAEVSAQCG-------EHP-PRPERWGGYRLMPDRLEFWQGRRSRLHDRIAYTLDAEGA---WRIGRLQP 211
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|981265708|ref|WP_059484358.1| (pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia] >gi|975924573|gb|KUY66956.1| pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia] >gi|975939430|gb|KUY81602.1| pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia]) HSP 1 Score: 231.876 bits (590), Expect = 3.257e-72 Identity = 121/245 (49.39%), Postives = 161/245 (65.71%), Query Frame = 0 Query: 87 MSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 M+++ADLR YS + L E ++ +P + F +W EA+AA++ EPN M L+TV +DG+PS R VL+KG+D+RGF +FTNY+SRKGHDLA A P AAL F+W +LER VR+EG +E+ S E S YF SRP GSRIGAWASEQS I SR+ LE+Q +VS R+G + P+P WGG+RLVP+ +EFW+GR SRLHDRL+YT + + A W ++RL P Sbjct: 1 MTTLADLRINYSRASLDEADVAHDPFAQFDRWFKEALAAKLPEPNTMTLATVGADGRPSARIVLIKGVDERGFVFFTNYESRKGHDLA----------------------AHPQAALLFYWIELERQVRIEGRIEKTSAEESDRYFASRPLGSRIGAWASEQSAVIDSRATLEAQEKAVSERYGDDP--------PRPPHWGGYRLVPDSIEFWQGRPSRLHDRLLYTRDAN-ASSGWSISRLSP 214
BLAST of EWM25034.1 vs. NCBI_GenBank
Match: gi|544732848|ref|WP_021162550.1| (MULTISPECIES: pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia complex] >gi|543286921|gb|ERJ34824.1| Pyridoxamine 5'-phosphate oxidase [Burkholderia sp. AU4i] >gi|976090328|gb|KVA29435.1| pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia] >gi|976101087|gb|KVA39963.1| pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia] >gi|976659576|gb|KVF55556.1| pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia] >gi|979900958|gb|KWB32269.1| pyridoxamine 5'-phosphate oxidase [Burkholderia cepacia]) HSP 1 Score: 231.491 bits (589), Expect = 5.085e-72 Identity = 121/245 (49.39%), Postives = 160/245 (65.31%), Query Frame = 0 Query: 87 MSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAAQVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAIPPSSSGSSAPPFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLEEDKAGRIWKLTRLQP 331 M+++ADLR YS + L E ++ +P + F +W EA+AA++ EPN M L+TV +DG+PS R VL+KG+D+RGF +FTNY+SRKGHDLA A P AAL F+W +LER VR+EG +E+ S E S YF SRP GSRIGAWASEQS I SR+ LE+Q +VS R+G P+P WGG+RLVP+ +EFW+GR SRLHDRL+YT + + A W ++RL P Sbjct: 1 MTTLADLRINYSRASLDEADVAHDPFAQFDRWFKEALAAKLPEPNTMTLATVGADGRPSARIVLIKGVDERGFVFFTNYESRKGHDLA----------------------AHPQAALLFYWIELERQVRIEGRIEKTSAEESDRYFASRPLGSRIGAWASEQSTVIDSRATLEAQEKAVSERYGDNP--------PRPPHWGGYRLVPDSIEFWQGRPSRLHDRLLYTRDAN-ASSGWSISRLSP 214 The following BLAST results are available for this feature:
BLAST of EWM25034.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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