EWM25075.1, cds5612 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|585106712|gb|EWM25075.1| (atp-dependent clp protease atp-binding subunit [Nannochloropsis gaditana]) HSP 1 Score: 875.93 bits (2262), Expect = 0.000e+0 Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0 Query: 1 MWRPYAAAVARRCVKRPTWSAVCHGSPGGRTQNLSTSHPPTSTLSSAAVPPKAFRVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKEQARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKRESGSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASLGGKGGGRGPIKAPCSRKWSPTIWSSLASSRSWWGGCRRSCTRKA 428 MWRPYAAAVARRCVKRPTWSAVCHGSPGGRTQNLSTSHPPTSTLSSAAVPPKAFRVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKEQARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKRESGSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASLGGKGGGRGPIKAPCSRKWSPTIWSSLASSRSWWGGCRRSCTRKA Sbjct: 1 MWRPYAAAVARRCVKRPTWSAVCHGSPGGRTQNLSTSHPPTSTLSSAAVPPKAFRVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKEQARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKRESGSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASLGGKGGGRGPIKAPCSRKWSPTIWSSLASSRSWWGGCRRSCTRKA 428
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|970654597|gb|KUF92890.1| (ATP-dependent Clp protease ATP-binding subunit ClpX [Phytophthora nicotianae] >gi|970664582|gb|KUG01466.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phytophthora nicotianae]) HSP 1 Score: 315.849 bits (808), Expect = 2.374e-99 Identity = 181/337 (53.71%), Postives = 231/337 (68.55%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTA--SGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRL-HHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIY+GL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A KH A + R G G T + DMD + S R L EEI + N + + N+ + + +P RL HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGE++ IDTT+ILFICGGAFAGLE + RR S++SIGFGA + Sbjct: 54 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACA-------KHNASSQHPRAG--------GVTRQHV-----DMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQ--NSKQHASEETAEAPKTTETTHTHATRLQHHSLGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM 365
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|675201991|ref|XP_008909880.1| (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica INRA-310] >gi|568090106|gb|ETN04943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica INRA-310]) HSP 1 Score: 315.464 bits (807), Expect = 1.956e-97 Identity = 181/337 (53.71%), Postives = 231/337 (68.55%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSV--HRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRL-HHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIY+GL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A KH A + R G G T + DMD + S R L EEI + N + + N+ + + +P RL HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGE++ IDTT+ILFICGGAFAGLE + RR S++SIGFGA + Sbjct: 214 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACA-------KHNASSQHPRAG--------GVTRQHV-----DMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQ--NSKQHASEETAEAPKTTETTHTHATRLQHHSLGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM 525
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|301118793|ref|XP_002907124.1| (ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora infestans T30-4] >gi|262105636|gb|EEY63688.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora infestans T30-4]) HSP 1 Score: 315.464 bits (807), Expect = 2.290e-97 Identity = 181/336 (53.87%), Postives = 229/336 (68.15%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDT--ASGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIYEGL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A KH A + R G G T + DMD S R L EEI + N + + TS + + + ++ HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGEH+ IDTT+ILFICGGAFAGLE + RR S++SIGFGA + Sbjct: 217 RVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACA-------KHNASSQHPRAG--------GVTRQHV-----DMDDPRLSNIGRRLLLEEIYPGSDKNDAEMPPTSKQHASEETAEVTKTTETTHTHATRLQ-HHSMGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEHITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM 528
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|568042950|gb|ETM40261.1| (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica]) HSP 1 Score: 315.079 bits (806), Expect = 2.345e-97 Identity = 181/337 (53.71%), Postives = 231/337 (68.55%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSV--HRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRL-HHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIY+GL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A KH A + R G G T + DMD + S R L EEI + N + + N+ + + +P RL HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGE++ IDTT+ILFICGGAFAGLE + RR S++SIGFGA + Sbjct: 214 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACA-------KHNASSQHPRAG--------GVTRQHV-----DMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQ--NSKQHASEETAEAPKTTETTHTHATRLQHHSLGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM 525
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|566017367|gb|ETI40278.1| (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P1569] >gi|567954753|gb|ETK80386.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >gi|567983418|gb|ETL33811.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >gi|568012912|gb|ETL87089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >gi|570321047|gb|ETO68995.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P1976] >gi|570944846|gb|ETP10103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica CJ01A1] >gi|570976365|gb|ETP38190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P10297]) HSP 1 Score: 314.694 bits (805), Expect = 3.297e-97 Identity = 181/337 (53.71%), Postives = 231/337 (68.55%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSV--HRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRL-HHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIY+GL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A KH A + R G G T + DMD + S R L EEI + N + + N+ + + +P RL HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGE++ IDTT+ILFICGGAFAGLE + RR S++SIGFGA + Sbjct: 210 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACA-------KHNASSQHPRAG--------GVTRQHV-----DMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQ--NSKQHASEETAEAPKTTETTHTHATRLQHHSLGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM 521
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|1214697327|gb|OWZ10628.1| (ATP-dependent Clp protease [Phytophthora megakarya]) HSP 1 Score: 312.768 bits (800), Expect = 1.864e-96 Identity = 183/336 (54.46%), Postives = 231/336 (68.75%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSV--HRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIYEGL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A KH A R G G T + DMD + S R L EEI A + S+ +S + + S +P P A T HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGE++ I+TT+ILFICGGAFAGLE + R S++SIGFGA + Sbjct: 209 RVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACA-------KHPAGTQHPRAG--------GVTRQHV-----DMDDSRLSSIGRRLLLEEIYPGAEKRDEASQSSKQHTSEDTAETSETP-LP-AHTHATRLQHHTLGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITINTTNILFICGGAFAGLEKQVTSRTSRSSIGFGAQM 519
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|695391535|ref|XP_009520055.1| (hypothetical protein PHYSODRAFT_554819 [Phytophthora sojae] >gi|348684952|gb|EGZ24767.1| hypothetical protein PHYSODRAFT_554819 [Phytophthora sojae]) HSP 1 Score: 310.071 bits (793), Expect = 2.809e-95 Identity = 179/335 (53.43%), Postives = 227/335 (67.76%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRL-HHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIYEGL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A K++HA R G + + S L S R L EEI + L + + G +S + RL HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGE++ IDTT+ILFICGGAFAGLE + RR S++SIGFGA + Sbjct: 230 RVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKDAEAACA-----KQQHA------RAGGVTRQHVDLDDSRL-----------SSIGRRLLLEEIYPGLEKKEAGLEQEAKQRAAEGTSETSEAAAAAPSHAHATRLQHHSLGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM 539
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|301091465|ref|XP_002895917.1| (ATP-dependent Clp protease ATP-binding subunit clpX, putative [Phytophthora infestans T30-4] >gi|262096081|gb|EEY54133.1| ATP-dependent Clp protease ATP-binding subunit clpX, putative [Phytophthora infestans T30-4]) HSP 1 Score: 305.449 bits (781), Expect = 1.766e-93 Identity = 177/334 (52.99%), Postives = 226/334 (67.66%), Query Frame = 0 Query: 57 LSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDT--ASGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 L+ R IYEGL +YVIGQ+ VK LAVGVH HY RL++ E QAR+ AEAA A KH A + R G G T + DMD S R L EEI + + N + + TS + + + ++ HH + + +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNPRGEH+ IDTT+ILFICGGAFAGLE + RR S++SIGFGA + Sbjct: 232 LTWRSIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACA-------KHNASSQHPRAG--------GVTRQHV-----DMDDPRLSNIGRRLLLEEIYSGSDKNDAEMPPTSKQHASEETAEVTKTTETTHTHATRLQ-HHSMGDKLQ---YLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEHITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM 541
BLAST of EWM25075.1 vs. NCBI_GenBank
Match: gi|953504040|emb|CEG35141.1| (atp-dependent clp atp-binding subunit [Plasmopara halstedii]) HSP 1 Score: 302.368 bits (773), Expect = 1.560e-92 Identity = 173/334 (51.80%), Postives = 217/334 (64.97%), Query Frame = 0 Query: 55 RVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKE--QARQAAEAAEAANGQRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSVHRFLREEILNAASGNPSSLSSTSNTSSGNGNDPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKR-ESGSV-RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASL 384 RVL+PREIY GL +YVIGQ+ VK LAVGVH HY RL++ E QA++ AEA+ KH A + +R AS RFL EEI SG+ + N + S + R +P +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+V+ DATCLTQAGYVGEDVES+LFKLYQAA +LEAT+RGI+YIDEIDK++++ E+ S+ RDVSGEGVQQALLK+LEG+ VNVP+ GGRKNPRGEH+ IDTT+ILFICGGAFAGLE + R S++SIGFGA + Sbjct: 221 RVLTPREIYNGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQAKKEAEASCV-------KHNAGSQHSR--------------------------ASTIGRRFLLEEIY---SGSEKVAEVSQNLKEDEMATTPETTSSTHTRA--------EPSTSNDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSIARDVSGEGVQQALLKILEGSTVNVPEKGGRKNPRGEHISIDTTNILFICGGAFAGLEKQVTHRSSRSSIGFGAQM 510 The following BLAST results are available for this feature:
BLAST of EWM25075.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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