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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100016g52.2932.mrna |
| Orig protein id | gnl|cribi|Naga_100016g52.2932 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:279161..281470 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5556 ID=rna5556|Name=rna5556|organism=Nannochloropsis gaditana|type=mRNA|length=651bp
ATGACTGCAAGGCACACAGGAAGCAGTGAGAAGAAGGACCTATCCAGGGC
CGTGGCCTTCTTGACGCTGGAGCGGGTGCAGGGCACTTCAGACAAGCTGA
AGACAGATTTCCTCCTCGGCAAAGGTTTCACAACCGATGAGATATCCGAC
GCGATGCTTCAAGCTCGAGATGTCATCGAAAAACGTAATAAGTCGGCAGC
ACGGGTACACTCCGTAGGCGGAAATCAAACTTTTGGCGCAGCAGCACCGA
CGCCTGTGAGTAGTATTGCGCACGTCCTGCCCGAGCCCAATGCTAAAGCG
AGTTCACTTGTCACGCTGCGTGGCGGCGCTCTCTCCTTCGTCGCGTTAGG
AAGTAAACCCTACGACGGCAATACGAGTCCCAGTTTTATCGTGGAGAATT
TGCTGAAAGATTTAGAGAGGACTCTGGTTGCACCTGTCCCGGCAGACGGA
GGGCAGCGTGATATTGCACGAGATAAGGCAGATGTTGCGGTCATATGTCT
CTCAGTGTACGGTTTACAAGACTGCGAAAACGACATCCATGCAATACTGG
ACAAATGGGTAGATCCTCAGGCGCCACCAGCTAGGTTTGTCGTAAGTGCC
CCTACTGAGAAACGCCATGCGGCGCAGCTATTGGCAATCGTGAGAGGGTA
G back to topprotein sequence of rna5556 >rna5556-protein ID=rna5556-protein|Name=rna5556|organism=Nannochloropsis gaditana|type=polypeptide|length=588bp
MPKRQGRSDGAMLKAKSNSKRGRDGSVTTDNEEHVRDSHAKGVVRRPRAI
HAQSETSRVESESKDLGHGDDLDPVTLARPSRAAASTAKARIGKTFEYRG
TGGNAIAEKVHTNGEKKESKPEKAAARQSGSLREAPHRLELVADRHSKGA
LLDALIRIKPPDVLMKAFKWSSRNDKYFALTVFSAKGNRILPELLKEVPL
RYRIASVGARRSNETTSKETGEEEVLYDEAGKATHGGMYYFRVPQFKIPG
CYSISFQLQGPAAFNKLDPVSQIVTVVPADALEHTDPFPPRAQENEAMAL
PTGTLRSLRSQRQGAEGSASNAAVGRGSTRDPALGGGGNARVQHSLEKHL
AASVKEDTDSMLTFDELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVV
GALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGA
RLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLA
IAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVART
YLQGLLDFLETEQASLFASYVEPPGKFGLDVPRNFRPS back to topmRNA from alignment at CM002466.1:279161..281470+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5556 ID=rna5556|Name=rna5556|organism=Nannochloropsis gaditana|type=mRNA|length=2310bp|location=Sequence derived from alignment at CM002466.1:279161..281470+ (Nannochloropsis gaditana)
GCATCATGCATGCCGGAACAAAGTCGCCGAGGATGGTTGCTCTTGCGCGA
CACATACTTGCACTGGTGCCCGCTTTTCATTCGTGATCACACGGCACCCG
ACGTCCCATGTCCAAGGGAAGAGTGGGATTGGTGGAATGTATTAAAGAGT
TCCTTCATATTTTtttgcaggagaagaaggctgcTCCAATGCTCTGGTAG
ATAAGGCGTCTTCGTCTTTTTTGCCTCCCGCGCGGACAAGTGAACAAGAA
ACAGCAACGGCGTCCTGCAAAGCACAGAAAAACCAAAAAATGCCCAAACG
TCAAGGTCGTAGCGATGGGGCGATGCTGAAAGCAAAATCGAATTCCAAAC
GTGGACGCGATGGTTCTGTGACAACAGACAATGAGGAGCACGTACGTGAT
TCGCATGCCAAGGGTGTAGTACGACGGCCTCGTGCTATACACGCACAAAG
CGAGACGAGCCGTGTCGAGAGTGAAAGCAAAGACCTGGGCCACGGGGATG
ACTTGGACCCCGTCACCTTGGCACGGCCGAGTCGCGCGGCTGCCTCCACA
GCCAAAGCTCGGATTGGGAAAACTTTCGAATATAGGGGCACGGGCGGTAA
CGCAATCGCGGAAAAGGTCCACACAAACGGTGAAAAGAAGGAGTCTAAGC
CCGAGAAGGCAGCAGCGCGACAGAGCGGAAGCCTTCGGGAGGCTCCGCAC
CGTTTAGAGCTTGTGGCGGACAGGCATTCCAAGGGCGCGTTGCTGGACGC
GCTAATCCGAATCAAGCCCCCCGATGTGCTCATGAAAGCCTTCAAGTGGT
CTTCGCGCAACGACAAGTACTTTGCCTTGACTGTTTTCAGCGCCAAGGGA
AATCGGATCCTGCCCGAGCTTCTCAAGGAAGTTCCCTTGCGCTACCGTAT
CGCCTCTGTGGGGGCGAGGCGTTCCAATGAAACGACAAGCAAGGAAACCG
GTGAGGAAGAAGTCCTGTACGACGAGGCCGGGAAAGCAACGCACGGTGGC
ATGTACTATTTTCGGGTTCCGCAATTCAAAATTCCCGGCTGTTACTCGAT
CAGTTTCCAGCTGCAGGGACCCGCGGCGTTCAACAAGCTCGACCCCGTCT
CGCAGATCGTCACTGTCGTTCCCGCAGATGCACTCGAGCACACCGATCCT
TTCCCACCGAGGGCGCAGGAGAATGAAGCCATGGCGCTTCCAACAGGGAC
CCTGCGAAGTCTTCGCAGTCAGCGTCAAGGCGCCGAAGGGAGCGCGTCAA
ATGCGGCGGTGGGCCGGGGGTCTACCCgcgaccccgccctcggaggagga
ggcaatgcCAGGGTGCAGCACAGCCTTGAGAAGCACCTGGCTGCGTCAGT
AAAGGAGGATACGGATTCCATGCTGACTTTCGACGAGCTGTGGCTGAAAG
GGCAGCTTCTCACTTTGGTCATTCCAGGCGCCTTGCGGCAACAATTGTGC
GAGGACTGGTTCGCTATCACTCGTCGGAGGTGTGTTGTCGGCGCTTTGCC
CCGCCACGATGGAAAAAAGAACATTCGTCTTGGGAAACAGACGTCGAACC
CTCAGTGGCCCagcgtgggggaggtggtcaGAATGTACGAGAGGTCAATC
CCAGCCGCATCCCTGGGAGATTTCAAGGGCCTAGGCGCAAGACTCTGCAC
GTTGTTCGACGGTGCTCTGGGCAACGTTTTACTGTACAGATTTGAAATGG
ACCAGTACTTATCTTTGCTGGAGCTCGGAGGGAAATCCAAGCTTCCTCAT
CAAATATGGGGTGCGGagcacctccttcgccttcttgctATCGCTCCTCG
TCTACTGGGAATTCAGAAAAGTACCAGCAACAAGAAAAGAGTGGACGAAG
AGAGCTCCGATACCCTGATGAATAGTGAAGCCCCCGTGGGGATGGAGGTC
GAGAGACCTGGGTCGAGAGAGATCGAGGTCGCACGCACATACCTGCAAGG
ACTTCTCGACTTCCTAGAGACGGAGCAAGCGAGTCTGTTTGCGTCGTACG
TGGAGCCACCGGGTAAATTTGGACTAGATGTTCCGCGTAATTTTCGGCCA
AGCTAAATTGCGCCACAAGAATGACCTTTCGCGGATGGCACGATGGTTAT
AATTCCAAGAAGACTCGGCAACTGTTAAAACTACCTTAGAAAGAAGCAAG
CCTTCTTTCGCGTACATGACTTCCTGCCATCAACAAACGGGGTTGTCCCC
CGCTCGTTGTCTTGCTCTTTTGACTAGACGTCCCAACACATAGCGAGGAT
GGCTTTTGTCCGGATGACTTTGGCCTTCAGAGAAAGAAACACTTTCCGAA
GCATTGCCTC back to topCoding sequence (CDS) from alignment at CM002466.1:279161..281470+ >rna5556 ID=rna5556|Name=rna5556|organism=Nannochloropsis gaditana|type=CDS|length=1767bp|location=Sequence derived from alignment at CM002466.1:279161..281470+ (Nannochloropsis gaditana)
ATGCCCAAACGTCAAGGTCGTAGCGATGGGGCGATGCTGAAAGCAAAATC
GAATTCCAAACGTGGACGCGATGGTTCTGTGACAACAGACAATGAGGAGC
ACGTACGTGATTCGCATGCCAAGGGTGTAGTACGACGGCCTCGTGCTATA
CACGCACAAAGCGAGACGAGCCGTGTCGAGAGTGAAAGCAAAGACCTGGG
CCACGGGGATGACTTGGACCCCGTCACCTTGGCACGGCCGAGTCGCGCGG
CTGCCTCCACAGCCAAAGCTCGGATTGGGAAAACTTTCGAATATAGGGGC
ACGGGCGGTAACGCAATCGCGGAAAAGGTCCACACAAACGGTGAAAAGAA
GGAGTCTAAGCCCGAGAAGGCAGCAGCGCGACAGAGCGGAAGCCTTCGGG
AGGCTCCGCACCGTTTAGAGCTTGTGGCGGACAGGCATTCCAAGGGCGCG
TTGCTGGACGCGCTAATCCGAATCAAGCCCCCCGATGTGCTCATGAAAGC
CTTCAAGTGGTCTTCGCGCAACGACAAGTACTTTGCCTTGACTGTTTTCA
GCGCCAAGGGAAATCGGATCCTGCCCGAGCTTCTCAAGGAAGTTCCCTTG
CGCTACCGTATCGCCTCTGTGGGGGCGAGGCGTTCCAATGAAACGACAAG
CAAGGAAACCGGTGAGGAAGAAGTCCTGTACGACGAGGCCGGGAAAGCAA
CGCACGGTGGCATGTACTATTTTCGGGTTCCGCAATTCAAAATTCCCGGC
TGTTACTCGATCAGTTTCCAGCTGCAGGGACCCGCGGCGTTCAACAAGCT
CGACCCCGTCTCGCAGATCGTCACTGTCGTTCCCGCAGATGCACTCGAGC
ACACCGATCCTTTCCCACCGAGGGCGCAGGAGAATGAAGCCATGGCGCTT
CCAACAGGGACCCTGCGAAGTCTTCGCAGTCAGCGTCAAGGCGCCGAAGG
GAGCGCGTCAAATGCGGCGGTGGGCCGGGGGTCTACCCgcgaccccgccc
tcggaggaggaggcaatgcCAGGGTGCAGCACAGCCTTGAGAAGCACCTG
GCTGCGTCAGTAAAGGAGGATACGGATTCCATGCTGACTTTCGACGAGCT
GTGGCTGAAAGGGCAGCTTCTCACTTTGGTCATTCCAGGCGCCTTGCGGC
AACAATTGTGCGAGGACTGGTTCGCTATCACTCGTCGGAGGTGTGTTGTC
GGCGCTTTGCCCCGCCACGATGGAAAAAAGAACATTCGTCTTGGGAAACA
GACGTCGAACCCTCAGTGGCCCagcgtgggggaggtggtcaGAATGTACG
AGAGGTCAATCCCAGCCGCATCCCTGGGAGATTTCAAGGGCCTAGGCGCA
AGACTCTGCACGTTGTTCGACGGTGCTCTGGGCAACGTTTTACTGTACAG
ATTTGAAATGGACCAGTACTTATCTTTGCTGGAGCTCGGAGGGAAATCCA
AGCTTCCTCATCAAATATGGGGTGCGGagcacctccttcgccttcttgct
ATCGCTCCTCGTCTACTGGGAATTCAGAAAAGTACCAGCAACAAGAAAAG
AGTGGACGAAGAGAGCTCCGATACCCTGATGAATAGTGAAGCCCCCGTGG
GGATGGAGGTCGAGAGACCTGGGTCGAGAGAGATCGAGGTCGCACGCACA
TACCTGCAAGGACTTCTCGACTTCCTAGAGACGGAGCAAGCGAGTCTGTT
TGCGTCGTACGTGGAGCCACCGGGTAAATTTGGACTAGATGTTCCGCGTA
ATTTTCGGCCAAGCTAA back to top
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