EWM25123.1, cds5542 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|585106761|gb|EWM25123.1| (hypothetical protein Naga_100016g52 [Nannochloropsis gaditana]) HSP 1 Score: 1206.05 bits (3119), Expect = 0.000e+0 Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 0
Query: 1 MPKRQGRSDGAMLKAKSNSKRGRDGSVTTDNEEHVRDSHAKGVVRRPRAIHAQSETSRVESESKDLGHGDDLDPVTLARPSRAAASTAKARIGKTFEYRGTGGNAIAEKVHTNGEKKESKPEKAAARQSGSLREAPHRLELVADRHSKGALLDALIRIKPPDVLMKAFKWSSRNDKYFALTVFSAKGNRILPELLKEVPLRYRIASVGARRSNETTSKETGEEEVLYDEAGKATHGGMYYFRVPQFKIPGCYSISFQLQGPAAFNKLDPVSQIVTVVPADALEHTDPFPPRAQENEAMALPTGTLRSLRSQRQGAEGSASNAAVGRGSTRDPALGGGGNARVQHSLEKHLAASVKEDTDSMLTFDELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFASYVEPPGKFGLDVPRNFRPS 588
MPKRQGRSDGAMLKAKSNSKRGRDGSVTTDNEEHVRDSHAKGVVRRPRAIHAQSETSRVESESKDLGHGDDLDPVTLARPSRAAASTAKARIGKTFEYRGTGGNAIAEKVHTNGEKKESKPEKAAARQSGSLREAPHRLELVADRHSKGALLDALIRIKPPDVLMKAFKWSSRNDKYFALTVFSAKGNRILPELLKEVPLRYRIASVGARRSNETTSKETGEEEVLYDEAGKATHGGMYYFRVPQFKIPGCYSISFQLQGPAAFNKLDPVSQIVTVVPADALEHTDPFPPRAQENEAMALPTGTLRSLRSQRQGAEGSASNAAVGRGSTRDPALGGGGNARVQHSLEKHLAASVKEDTDSMLTFDELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFASYVEPPGKFGLDVPRNFRPS
Sbjct: 1 MPKRQGRSDGAMLKAKSNSKRGRDGSVTTDNEEHVRDSHAKGVVRRPRAIHAQSETSRVESESKDLGHGDDLDPVTLARPSRAAASTAKARIGKTFEYRGTGGNAIAEKVHTNGEKKESKPEKAAARQSGSLREAPHRLELVADRHSKGALLDALIRIKPPDVLMKAFKWSSRNDKYFALTVFSAKGNRILPELLKEVPLRYRIASVGARRSNETTSKETGEEEVLYDEAGKATHGGMYYFRVPQFKIPGCYSISFQLQGPAAFNKLDPVSQIVTVVPADALEHTDPFPPRAQENEAMALPTGTLRSLRSQRQGAEGSASNAAVGRGSTRDPALGGGGNARVQHSLEKHLAASVKEDTDSMLTFDELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFASYVEPPGKFGLDVPRNFRPS 588
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|1034733850|gb|OAV88052.1| (hypothetical protein PTTG_05657 [Puccinia triticina 1-1 BBBD Race 1]) HSP 1 Score: 81.2629 bits (199), Expect = 3.144e-13 Identity = 62/201 (30.85%), Postives = 92/201 (45.77%), Query Frame = 0
Query: 374 LTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYER-----SIPAASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFAS 569
+T+VIP L+ QL +DW A+TR+ VV +LPR P+V ++ YE+ S A + K + A L FD +LG+ LLYR E QY+ + K KLP +I+GAEHLLRL+ P ++ S T M E I + R ++ +LD++ EQ+ + S
Sbjct: 138 ITIVIPEPLKLQLVDDWEAVTRKNQVV-SLPRS-----------------PNVKSLLEEYEQYAVNDSTTAQAKNLIKEVNAGLKVYFDKSLGHCLLYRNERQQYIDTRK-KLKCKLPSEIYGAEHLLRLIVNLPEMI----------------SHTKMEPEI-------------INIVREHIAKILDWIVAEQSRIIQS 290
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|909606633|gb|KNE96992.1| (hypothetical protein PSTG_09730 [Puccinia striiformis f. sp. tritici PST-78]) HSP 1 Score: 79.337 bits (194), Expect = 1.481e-12 Identity = 63/209 (30.14%), Postives = 98/209 (46.89%), Query Frame = 0
Query: 372 QLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYER-------SIPAASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFAS-YVE 572
Q +T++IP AL+ QL +DW A+TR+ VV +LPR P+V +++ YE + S K + A L FD +LG+ LLYR E Q++ + + K KLP +I+GAEHLLRL+ P ++ S T M E I + + ++ +L++L TEQ+ + S Y+E
Sbjct: 147 QTITIMIPEALKLQLVDDWEAVTRKNQVV-SLPRT-----------------PTVKKLLEEYEEYTINEPITTTPQSKNLIKEVNAGLKVYFDRSLGHSLLYRNERQQFIDIRK-KLKGKLPSEIYGAEHLLRLIVNLPEMI----------------SHTKMEPEI-------------IGIVQEHIAKILEWLVTEQSRVIQSPYIE 307
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|296420776|ref|XP_002839944.1| (hypothetical protein [Tuber melanosporum Mel28] >gi|295636152|emb|CAZ84135.1| unnamed protein product [Tuber melanosporum]) HSP 1 Score: 78.1814 bits (191), Expect = 3.018e-12 Identity = 50/149 (33.56%), Postives = 78/149 (52.35%), Query Frame = 0
Query: 365 DELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIP-----AASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSL-LELGGKSKLPHQIWGAEHLLRLLAIAPRLLG 507
+E ++K + + IP L+ L +DW +T+ + +V LPR+ PSV ++++ Y S+P +A + F+ + A L FD +LG +LLYRFE QY+ + E GK P +++GAEHLLRL P LL
Sbjct: 134 EEDFMKRHDIKITIPDNLKALLVDDWENVTKNQQLV-PLPRN-----------------PSVTQILQKYRESMPKKREGSADMDIFEEVLAGLKLYFDKSLGTILLYRFERQQYMEIRKEHPGKE--PSELYGAEHLLRLFVSMPELLA 262
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|403175276|ref|XP_003334123.2| (hypothetical protein PGTG_15360 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] >gi|375171532|gb|EFP89704.2| hypothetical protein PGTG_15360 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]) HSP 1 Score: 77.7962 bits (190), Expect = 4.178e-12 Identity = 64/204 (31.37%), Postives = 93/204 (45.59%), Query Frame = 0
Query: 372 QLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYER------SIPAASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFAS 569
Q +T+VIP L+ QL +DW A+TR+ VV +LPR P+V ++ YER + P A K + A L FD +LG LLYR E QY+ + + K KL +I+GAEHLLRL+ P ++ S T M E I + R ++ +L++L TEQ+ + S
Sbjct: 136 QPVTIVIPEPLKIQLVDDWEAVTRQNQVV-SLPRT-----------------PTVKSLLEEYERYAIDDSTTPQAK-NLIKEVNAGLKVYFDKSLGYCLLYRNERQQYIEIRK-KLKGKLASEIYGAEHLLRLIVNLPEMI----------------SHTKMEPEI-------------INIVREHVAKILEWLVTEQSRVIQS 290
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|1063244185|gb|ODQ66960.1| (MRG-domain-containing protein [Nadsonia fulvescens var. elongata DSM 6958]) HSP 1 Score: 77.411 bits (189), Expect = 7.573e-12 Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = 0
Query: 368 WLKGQLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIP-----AASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLF 567
+LK + + +P +L++ L +DW IT+ VV LPR P+V ++++ Y+ P +A F + + + FD +LGN+LLYR+E QYL +L+ + +I+GAEHLLRL P L+ + +D++S I V + +L+ +L FL QA F
Sbjct: 150 YLKRPEIVINVPDSLKELLVDDWEFITKEHQVV-TLPRK-----------------PNVVQILKRYQDESPKKKANSAEADIFDEVLSGIKIYFDRSLGNILLYRYERQQYLEILKTNADKSMS-EIYGAEHLLRLFVSLPSLIA-------QTNMDQQS----------------------IAVLKEHLEDVLKFLHKHQAEFF 306
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|667791939|ref|XP_007875107.1| (hypothetical protein PNEG_03052 [Pneumocystis murina B123] >gi|470316837|gb|EMR08575.1| hypothetical protein PNEG_03052 [Pneumocystis murina B123]) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-11 Identity = 60/207 (28.99%), Postives = 88/207 (42.51%), Query Frame = 0
Query: 374 LTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGARLC--------TLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFASYVE 572
+ + IP L+ QL +DW IT+ + +V +LPR P+V E+++ Y+ SI A F L + FD LGN+LLYRFE QY S + K+K I+GAEHLLRL P L+ + T M+ ++ I++ + Y++ L FL QA F E
Sbjct: 132 INIPIPDTLKAQLVDDWENITKNQQLV-SLPRS-----------------PTVTEILQNYKNSILAFQKKRFTDLDTDIFEEVVSGIKLYFDRCLGNILLYRFERQQY-SDIRKTAKNKEMSDIYGAEHLLRLFVTLPELI----------------AHTNMDYQS-------------IQILKNYIKDFLKFLVKNQAEYFLKIYE 290
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|403175927|ref|XP_003334668.2| (hypothetical protein PGTG_16527 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] >gi|375171812|gb|EFP90249.2| hypothetical protein PGTG_16527 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]) HSP 1 Score: 75.485 bits (184), Expect = 2.806e-11 Identity = 63/204 (30.88%), Postives = 92/204 (45.10%), Query Frame = 0
Query: 372 QLLTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYER------SIPAASLGDFKGLGARLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFAS 569
Q +T+VIP L+ QL +DW A+TR+ VV +LPR P+V ++ YER + P A K + A L FD +LG LLYR E QY+ + + K KL +I+GAEHLLRL+ P ++ S T M E I + R ++ +L++L EQ+ + S
Sbjct: 136 QPVTIVIPEPLKIQLVDDWEAVTRQNQVV-SLPRT-----------------PTVKSLLEEYERYAVDDSTTPQAK-NLIKEVNAGLKVYFDKSLGYCLLYRNERQQYIEIRK-KLKGKLASEIYGAEHLLRLIVNLPEMI----------------SHTKMEPEI-------------INIVREHVAKILEWLVLEQSRVIQS 290
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|1069856330|ref|XP_018227689.1| (hypothetical protein T552_00211 [Pneumocystis carinii B80] >gi|968586900|gb|KTW31573.1| hypothetical protein T552_00211 [Pneumocystis carinii B80]) HSP 1 Score: 74.3294 bits (181), Expect = 6.107e-11 Identity = 59/207 (28.50%), Postives = 86/207 (41.55%), Query Frame = 0
Query: 374 LTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGARLC--------TLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFASYVE 572
+ + IP L+ QL +DW IT+ + +V +LPR P+V E+++ Y+ SI F L + FD LGN+LLYRFE QY S + K K I+GAEHLLRL P L+ + T M+ ++ I++ + Y++ L FL QA F E
Sbjct: 132 INIPIPDTLKAQLVDDWENITKNQQLV-SLPRS-----------------PTVTEILQNYKNSILTLQKKRFTDLDTDIFEEVVSGIKLYFDRCLGNILLYRFERQQY-SDIRKTAKDKEMSDIYGAEHLLRLFVTLPELI----------------AHTNMDYQS-------------IQILKNYIKDFLKFLVKNQAEYFLKIYE 290
BLAST of EWM25123.1 vs. NCBI_GenBank
Match: gi|1069889155|ref|XP_018228074.1| (hypothetical protein T551_03462 [Pneumocystis jirovecii RU7] >gi|968581848|gb|KTW26545.1| hypothetical protein T551_03462 [Pneumocystis jirovecii RU7]) HSP 1 Score: 73.559 bits (179), Expect = 1.083e-10 Identity = 58/207 (28.02%), Postives = 86/207 (41.55%), Query Frame = 0
Query: 374 LTLVIPGALRQQLCEDWFAITRRRCVVGALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGARLC--------TLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVARTYLQGLLDFLETEQASLFASYVE 572
+ + IP AL+ QL +DW IT+ + +V +LPR P+V E+++ Y+ S+ + F A + FD LGN+LLYRFE QY S + K K I+GAEHLLRL P L+ +D +S I++ + Y++ L FL Q+ F E
Sbjct: 137 INIAIPDALKAQLVDDWENITKNQQLV-SLPRS-----------------PTVTEILQNYKNSVSSTQKKRFSNADADIFEEVISGIKLYFDRCLGNILLYRFERQQY-SDIRKTYKDKEMSDIYGAEHLLRLFVSLPELIA-------HTNMDHQS----------------------IQILKNYIKEFLKFLTKNQSEYFLKVYE 295 The following BLAST results are available for this feature:
BLAST of EWM25123.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|