EWM25153.1, cds5536 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|585106791|gb|EWM25153.1| (ATPase, F0 complex, subunit B, mitochondrial [Nannochloropsis gaditana]) HSP 1 Score: 743.036 bits (1917), Expect = 0.000e+0 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0 Query: 1 MSLSLLRIKQEGSRLVRSFSCWCARAGSVCGGIVSPEAYFVSNMLSILSRRALQASARRQCLSAASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAKLKKAAVDQVVAILKDPAAEQADLVGAEFERVGKTMWEELVKKETGGAAPKEQVATLAAEIKAIKAKGPAVSEMDLDNAVRVYHTAMKGGIKPAQLR 367 MSLSLLRIKQEGSRLVRSFSCWCARAGSVCGGIVSPEAYFVSNMLSILSRRALQASARRQCLSAASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAKLKKAAVDQVVAILKDPAAEQADLVGAEFERVGKTMWEELVKKETGGAAPKEQVATLAAEIKAIKAKGPAVSEMDLDNAVRVYHTAMKGGIKPAQLR Sbjct: 1 MSLSLLRIKQEGSRLVRSFSCWCARAGSVCGGIVSPEAYFVSNMLSILSRRALQASARRQCLSAASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAKLKKAAVDQVVAILKDPAAEQADLVGAEFERVGKTMWEELVKKETGGAAPKEQVATLAAEIKAIKAKGPAVSEMDLDNAVRVYHTAMKGGIKPAQLR 367
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|669144820|ref|XP_008607972.1| (hypothetical protein SDRG_04092 [Saprolegnia diclina VS20] >gi|530740138|gb|EQC38380.1| hypothetical protein SDRG_04092 [Saprolegnia diclina VS20]) HSP 1 Score: 116.316 bits (290), Expect = 3.054e-26 Identity = 86/273 (31.50%), Postives = 139/273 (50.92%), Query Frame = 0 Query: 47 ILSRRALQAS--ARRQCLS-AASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAK-LKKAAVDQVVAILKD-PAAEQADLVGAEFERVGKTMWEELVKKE 314 +LSR AL+++ ARR L ++FH+G +R A AA + +G ++ GL DWK+ +P LA S+P L+N +Y L E+QL F+ F T+ YK+ G A+G + R AI+ E N +E+ L + KET+ A TI +D+ AL E + V + +++H+ RD YV+ L+A E++ + L + + + A V FAS K +K A + +L + P + D V A F + + E L K++ Sbjct: 1 MLSRFALRSATAARRSALKPVGASFHTGALRLKEEKEGEVAVAAENH----------DGVFQKIGLDDWKISMPLVLACSIPALSNGFYELGAESQLACCFLLFCTSAYKFGGDAVGSYFEARANAILAEQNAVEDANLAVAKETLKAHEAILTIRKDIDALGVAHEEALALMCRVQSQKLRHKTRDVYVKNLEAIHNLEQSYNQQLQDAMISQAAEAVRSQFASGKKAVKTEAFQMALDVLSEKPDDNKQDPVAAAFGKELRAFAENLEKQQ 263
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|813191970|ref|XP_012207867.1| (hypothetical protein SPRG_12427 [Saprolegnia parasitica CBS 223.65] >gi|641527108|gb|KDO21420.1| hypothetical protein SPRG_12427 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 115.931 bits (289), Expect = 4.642e-26 Identity = 86/273 (31.50%), Postives = 139/273 (50.92%), Query Frame = 0 Query: 47 ILSRRALQAS--ARRQCLSA-ASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAK-LKKAAVDQVVAILKD-PAAEQADLVGAEFERVGKTMWEELVKKE 314 +LSR AL+++ ARR L ++FH+G +R A AA + +G ++ GL DWK+ +P LA S+P L+N +Y L E+QL F+ F T+ YK+ G A+G + R AI+ E N +E+ L + KET+ A TI +D+ AL E + V + +++H+ RD YV+ L+A E++ + L + + + A V FAS K +K A + +L + P + D V A F + + E L K++ Sbjct: 1 MLSRFALRSATAARRSALKPLGASFHTGALRLKEEKEGEVAVAAENH----------DGVFQKIGLDDWKISMPLVLACSIPALSNGFYELGAESQLACCFLLFCTSAYKFGGDAVGSYFEARANAILAEQNAVEDANLAVAKETLKAHEAILTIRKDIDALGVAHEEALALMCRVQSQKLRHKTRDVYVKNLEAIHNLEQSYNQQLQDAMISQAAEAVRSQFASGKKAVKTEAFQMALDVLSEKPDDNKQDPVAAAFGKELRAFAENLEKQQ 263
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|1173937090|gb|OQR87943.1| (hypothetical protein ACHHYP_07793 [Achlya hypogyna]) HSP 1 Score: 112.464 bits (280), Expect = 8.728e-25 Identity = 82/273 (30.04%), Postives = 139/273 (50.92%), Query Frame = 0 Query: 47 ILSRRALQAS--ARRQCLSA-ASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAK-LKKAAVDQVVAILKD-PAAEQADLVGAEFERVGKTMWEELVKKE 314 +LSR AL+++ ARR + ++FH+G +R A AA + +G ++ GL DWK+ +P LA S+P ++N +Y L E+QL F+ F T+ YK+ G A+G + R AI+ E N +E+ L + +ET+ A TI +D+ AL E + V + +++H+ RD YV+ L+A E++ + L + + + A V FA+ K +K A + +L + P + D V A F + + E L K++ Sbjct: 1 MLSRFALRSATAARRSAMKPLGASFHTGALRLKEEKEGEVAVAAENH----------DGVFQKIGLDDWKISMPLVLACSIPAISNGFYELGAESQLACCFLLFCTSAYKFGGDAVGSYFEARANAILAEQNAVEDANLAVAQETLKAHEAILTIRKDIDALGVAHKEALALMCHVQSQKLRHKTRDVYVKNLEAIHQLEQSYNQQLQDAMISQAANNVRSAFAAGKKAVKTEAFQMALDVLSEKPDDNKQDPVAAAFGKELRAFAENLEKQQ 263
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|325181423|emb|CCA15839.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 109.383 bits (272), Expect = 9.897e-24 Identity = 77/249 (30.92%), Postives = 124/249 (49.80%), Query Frame = 0 Query: 68 FHSGPVR---RDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAK-LKKAAVDQVVAIL--KDPAAEQADLVGAEFERVGKTMWEEL 310 FH+ P R R ++++ +V++ P + LE+YGL DWKV P G+AL+VP L+ Y+++EETQL A F F T+VYK+ G AI D R +AI++E N +E+ + L KET+ A I +D+ + + + V A +++H R +++ LDA + E AL + + + V K K AA + IL D E+ D + A F + ++ E+L Sbjct: 13 FHTLPSRPAFRSFSSHALEQKTSVNE----PTTSEKQSLLEKYGLDDWKVTAPIGVALAVPILSKGIYVINEETQLAACFFLFCTSVYKFGGKAISSYFDARAQAILQEHNAVEDANIELAKETLKAHESLLAIRDDVALVTEAHKDAVALMCQVQAYKLRHETRITFIKNLDAIKSIEDECNAALKAALIRKATENVRSILVKGGKPTKAAAFKHALNILSQSDMDDEKEDEIAALFAKELRSCAEKL 257
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|953491627|emb|CEG45636.1| (atp synthase subunit mitochondrial [Plasmopara halstedii]) HSP 1 Score: 107.457 bits (267), Expect = 5.204e-23 Identity = 79/244 (32.38%), Postives = 122/244 (50.00%), Query Frame = 0 Query: 67 TFHS-GPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLD------RTAVQVTKNFASDAKLKKAAVDQVVAILKDPAAEQA--DLVGAEFER 301 +FHS G VR+D A + P V +G L++ GLTDWK+ P AL++P ++N +Y+L+EE+QL F+ F T YK+ G I DER AI+ E N +E+ L L KET++ I ED+ A+ E + V A +++H+ RD +V+ L++ E + K L + + RT VQ D KLK+ A + IL + +++ D V A F + Sbjct: 27 SFHSTGSVRKDEA-QAEEIP------------VPTQGLLDQAGLTDWKISAPIIGALAIPAISNHFYVLNEESQLACCFLLFCTATYKFGGEMIASYFDERAAAILSEHNAVEDANLALAKETLETHKSMLNIHEDIAAVAEAHKEAIALMCKVQAYKLRHKTRDTFVKNLESIRQIESSYKLELQRCMVASATSKVRTVVQ-----KGDKKLKETAFRHALDILGNVDVDESKEDDVAALFSK 252
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|698786157|ref|XP_009826122.1| (hypothetical protein H257_03641 [Aphanomyces astaci] >gi|574118950|gb|ETV84430.1| hypothetical protein H257_03641 [Aphanomyces astaci]) HSP 1 Score: 105.916 bits (263), Expect = 1.899e-22 Identity = 83/267 (31.09%), Postives = 127/267 (47.57%), Query Frame = 0 Query: 47 ILSRRALQASARRQCLSAASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAKLKKAAVDQV-VAILKDPAAEQA--DLVGAEFERVGKTMWEEL 310 +LSR AL+ + R A+ FH+G R+ D+ S L +YGL D + +P A+S+P ++N WY L ETQL F F T+ YKY GGAIG + R +AI+ E N +E+ L L KET+ A TI +D+ L E L V +++H+ RD +V+ LDA E++ + L + + V K ++ K KA Q+ + IL + +++ D V A F + + E L Sbjct: 1 MLSRVALRTA--RLSKPTAAAFHTGAFRQQEEKKDGEVAIPADNRSF----------LNKYGLDDPLISLPIIAAVSIPAISNGWYELGAETQLACCFALFVTSAYKYGGGAIGSYFESRADAILAEQNAVEDANLALAKETLKAHESILTIKKDIATLGVAHEEALALLCQVQNAKLRHKTRDTFVKNLDAIYQLEQSYNQELQNAMIASATAAVRKTISAGKKETKAEAFQLALDILSEKNIDESKPDAVAAAFGKELRAFAEHL 255
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|635367063|emb|CCI44691.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 105.531 bits (262), Expect = 2.544e-22 Identity = 76/250 (30.40%), Postives = 125/250 (50.00%), Query Frame = 0 Query: 94 KPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAK-LKKAAVDQVVAIL--KDPAAEQADLVGAEFERVGKTMWEELVKKETGGAAP---KEQVATLAAEIKAIKAK 337 +P + ++RYGL DWKV P +AL++P L+ Y+++EETQL A F F T+VYK+ G A+ D R +AI++E N +E+ + L KET+ A I +D+ + + + V A +++H R ++R LDA + E L ++ + + V K K AA+ + IL D E+ D + A F + ++ E+L + + G P EQVA +E+ A K + Sbjct: 36 EPTTNEKQSLVQRYGLDDWKVSAPIAVALAIPILSKGIYVINEETQLAACFFLFCTSVYKFGGNAVSSYFDARAQAILQEHNAVEDANIELAKETLKAHESLLAIRDDVALVTEAHKDAVALMCQVQAYKLRHETRKTFIRNLDAIKSIEDECNAELKKALIRKATENVRSILVKGGKSTKAAALKHALNILSQSDMDDEKEDEIAALFAKELRSCAEKL-EAQQGTVVPLTEAEQVA-FQSELDAYKKR 283
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|673033984|ref|XP_008870953.1| (hypothetical protein H310_07347 [Aphanomyces invadans] >gi|574473815|gb|ETW00818.1| hypothetical protein H310_07347 [Aphanomyces invadans]) HSP 1 Score: 105.145 bits (261), Expect = 3.953e-22 Identity = 83/267 (31.09%), Postives = 127/267 (47.57%), Query Frame = 0 Query: 47 ILSRRALQASARRQCLSAASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAKLKKAAVDQV-VAILKDPAAEQA--DLVGAEFERVGKTMWEEL 310 +LSR AL+ + AA+ FH+G R+ D+ S L RYGL D + +P A+S+P ++N WY L ETQL F F T+ YKY G AIG + R +AI+ E N +E+ L L KET+ A TI +D+ L E L V +++H+ RD +V+ L+A E++ + L ++ + V K ++ K KA Q+ + IL + A ++ D V A F + + E L Sbjct: 1 MLSRVALRTARLSAFKPAAAAFHTGAFRQQEEKKEGEVAIPADNRSF----------LNRYGLDDPLISLPIIAAVSIPAISNGWYELGAETQLACCFALFVTSAYKYGGSAIGSYFESRADAILAEQNAVEDANLALAKETLKAHESILTIKKDIATLGVAHEEALALLCQVQNAKLRHKTRDTFVKNLEAIYQLEQSYNQELQEAMVASATAAVRKTLSAGKKEVKAEAFQLALDILSEKAIDETKPDAVAAAFGKELRAFAEHL 257
BLAST of EWM25153.1 vs. NCBI_GenBank
Match: gi|1214687799|gb|OWZ03960.1| (hypothetical protein PHMEG_00024223 [Phytophthora megakarya]) HSP 1 Score: 104.76 bits (260), Expect = 5.848e-22 Identity = 65/188 (34.57%), Postives = 99/188 (52.66%), Query Frame = 0 Query: 98 VSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFA-SDAKLKKAAVDQVVAIL 284 V +G L++ GLTDWK+ P ALS+P ++N +Y+L+EE+QL F+ F + YK+ G I DER AI+ E N +E+ L L KET++ I ED+ A+ E + V A +++H+ RD +V+ L++ E + L +S + QV D KLK AA + IL Sbjct: 45 VPTQGLLDQAGLTDWKISAPIIGALSIPAISNHFYVLNEESQLACCFLLFCSASYKFGGEMIASYFDERAAAILGEHNAVEDANLDLAKETLETHKAMLNIHEDIAAVAEAHKEAVALMCEVQAYKLRHKTRDTFVKNLESIREIESSYNLELQKSMVANATNQVRAVVQKGDKKLKDAAFKHALDIL 232 The following BLAST results are available for this feature:
BLAST of EWM25153.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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