EWM25188.1, cds5483 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25188.1 vs. NCBI_GenBank
Match: gi|585106850|gb|EWM25188.1| (c6 finger domain protein [Nannochloropsis gaditana]) HSP 1 Score: 849.736 bits (2194), Expect = 0.000e+0 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0 Query: 1 MKILESSPGHPCKDDVPRSQSKREGGENPQKEKENSNDHKVDREKLIASLDRSVGGLHEVKGGKEGRDDLQGDTRPMTSEAVFPEGKHADEWDDESQHAALQGVATENKDDKKKPKYQGPRGRACLECKMSKVKCDRKQPHCTRCVSHGFLCIPQNRGPGRPAKWRLYLADEDALDSSSLWAGQARTMIRQGCKLEPPALPPSLPSSFHASTYRPDMSLPPPMLPQLRGPSSSSSSSSSSSSPCLPSSYPSTPLPLHPSVKKRERSLDEREEHLLAARCLKSLKKVQHFPPHPPALPPSGLGDLSYTTCPPRYNADGFVYNRKKYPGADLPGMGVYYNGDIQPHHNPSTRSGPSFSPCWYPSFQHAVAPSLPAYHPAALPDHPSYHMPWGGMAPSYGPRPALSAPFLPTPSWDGRRGR 418 MKILESSPGHPCKDDVPRSQSKREGGENPQKEKENSNDHKVDREKLIASLDRSVGGLHEVKGGKEGRDDLQGDTRPMTSEAVFPEGKHADEWDDESQHAALQGVATENKDDKKKPKYQGPRGRACLECKMSKVKCDRKQPHCTRCVSHGFLCIPQNRGPGRPAKWRLYLADEDALDSSSLWAGQARTMIRQGCKLEPPALPPSLPSSFHASTYRPDMSLPPPMLPQLRGPSSSSSSSSSSSSPCLPSSYPSTPLPLHPSVKKRERSLDEREEHLLAARCLKSLKKVQHFPPHPPALPPSGLGDLSYTTCPPRYNADGFVYNRKKYPGADLPGMGVYYNGDIQPHHNPSTRSGPSFSPCWYPSFQHAVAPSLPAYHPAALPDHPSYHMPWGGMAPSYGPRPALSAPFLPTPSWDGRRGR Sbjct: 1 MKILESSPGHPCKDDVPRSQSKREGGENPQKEKENSNDHKVDREKLIASLDRSVGGLHEVKGGKEGRDDLQGDTRPMTSEAVFPEGKHADEWDDESQHAALQGVATENKDDKKKPKYQGPRGRACLECKMSKVKCDRKQPHCTRCVSHGFLCIPQNRGPGRPAKWRLYLADEDALDSSSLWAGQARTMIRQGCKLEPPALPPSLPSSFHASTYRPDMSLPPPMLPQLRGPSSSSSSSSSSSSPCLPSSYPSTPLPLHPSVKKRERSLDEREEHLLAARCLKSLKKVQHFPPHPPALPPSGLGDLSYTTCPPRYNADGFVYNRKKYPGADLPGMGVYYNGDIQPHHNPSTRSGPSFSPCWYPSFQHAVAPSLPAYHPAALPDHPSYHMPWGGMAPSYGPRPALSAPFLPTPSWDGRRGR 418
BLAST of EWM25188.1 vs. NCBI_GenBank
Match: gi|585106848|gb|EWM25186.1| (hypothetical protein Naga_100146g7 [Nannochloropsis gaditana]) HSP 1 Score: 128.257 bits (321), Expect = 4.949e-29 Identity = 120/370 (32.43%), Postives = 164/370 (44.32%), Query Frame = 0 Query: 15 DVPRSQSKREGGENPQKEKENSNDHKVDREKLIASLDRSVGGLHEVKGGKEGRDDLQGDTRPMTSEAVFPEGKHADEWDDESQHAALQGVATENKDDKK-----KPKYQ--------GPRGRACLECKMSKVKCDRKQPHCTRCVSHGFLCIPQNRGPGRPAKWRLYLADEDALDSSS-LWAGQARTMIRQGCK--------------LEPPALPPSLPSSFHASTYRPDMSLPPPMLPQLRGPSSSSSSSSSSSSPCLPSSYPSTPLPLHPSVKKRERSLDEREEHLLAARCLKSLKKVQHF---PPHPPALPPSGLGDLSYTTCPPRYNADGFVYNRKKYPGADLPGMGVYYN----GDIQPHHNPST 349 D+ + +E G + E++ +V + + R + E KGG GR+ +G T V GK A ES+ A + +N++DK K Y+ PRG CLECK SKVKCD+ QP CTRC HGFLCIPQ RG GRPAKWR+YLA++ A+ LW ++ ++ + + P LPPS ++T + PP+ L P S + SSS P P S S+ S K++ E E+ L+AAR LK LK PPHP S S+ + G V +R Y G GMG YY+ G QP+ ST Sbjct: 34 DIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGAT-------VLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKVKCDKVQPRCTRCARHGFLCIPQTRGQGRPAKWRMYLAEDAAIQKEGDLWNAHSKALLLSAAQARSKEESISASSDPVRPAYLPPSGLPGLTSTTRGTSLPASPPLPASLSPPLSDITGVSSSFRP--PHSQFSSSFLTRASGKRQMPPCSEAEDRLVAARSLKCLKNGDASPFPPPHPIVGSTSRPVHPSFPSFATVAGTRGAV-DRNNYLGN---GMGGYYSHGYPGSTQPNRPYST 390
BLAST of EWM25188.1 vs. NCBI_GenBank
Match: gi|585106853|gb|EWM25191.1| (c6 finger domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 70.0922 bits (170), Expect = 2.431e-9 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 99 AALQGVATENKDDKKKPKYQGPRGRACLECKMSKVKCDRKQPHCTRCVSHGFLCIPQNRGPGRPAKWRLYLA 170 A +G A + ++ P+ + GR CLECK SKVKCDRKQP CTRC C+PQ R PGRP +W Y++ Sbjct: 52 AQRKGDAPGGGEVQRAPRRRLRDGRTCLECKRSKVKCDRKQPSCTRCARSNLKCLPQKRKPGRP-RWGPYIS 122 The following BLAST results are available for this feature:
BLAST of EWM25188.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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