EWM25219.1, cds5453 (CDS) Nannochloropsis gaditana

Overview
NameEWM25219.1
Unique Namecds5453
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:14094..14237 -
Alignment locationCM002466.1:13514..13906 -
Alignment locationCM002466.1:13389..13406 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25219.1
Productcytochrome p450
Orig transcript idgnl|cribi|Naga_100790g1.7583.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:14094..14237 -
CM002466.1supercontigCM002466.1:13514..13906 -
CM002466.1supercontigCM002466.1:13389..13406 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0020037heme binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506iron ion binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001128Cyt_P450
Homology
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|585106907|gb|EWM25219.1| (cytochrome p450 [Nannochloropsis gaditana])

HSP 1 Score: 370.933 bits (951), Expect = 5.731e-130
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query:    1 MAHLIPSFPSSLTTVISLLFPLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVHQFLDFFSPLGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVFDTAKRSLARMPGYYQ 184
            MAHLIPSFPSSLTTVISLLFPLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVHQFLDFFSPLGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVFDTAKRSLARMPGYYQ
Sbjct:    1 MAHLIPSFPSSLTTVISLLFPLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVHQFLDFFSPLGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVFDTAKRSLARMPGYYQ 184          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|1046776202|gb|OCK84471.1| (cytochrome P450 [Lepidopterella palustris CBS 459.81])

HSP 1 Score: 89.3521 bits (220), Expect = 2.133e-17
Identity = 61/167 (36.53%), Postives = 88/167 (52.69%), Query Frame = 0
Query:   11 SLTTVISLLFPLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVH--------QFLDFFSPLGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVF 169
            +L+T  +   P V+L    F L WL+   T  +W       LP +          +L F  P    +  LL Y+         +FE L T +F  VSS  L + I DA +I +V+ TRR  FPK +++Y RL I+G N+V+TEG+ WR+HR+V   +F+E NN LVF
Sbjct:   27 NLSTAKASGIPYVVLPWNVFHLFWLA---THTVW-------LPILELLPTSWTSSWLRFMHPE---WAYLLGYK---------VFEDLGTDIFLTVSSGRLQLFIADAEVINQVT-TRRNDFPKPLQMYKRLDIYGKNVVSTEGSTWRQHRKVTAPSFSEKNNELVF 170          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|1046804971|gb|OCL10703.1| (cytochrome P450 monooxygenase-like protein [Glonium stellatum])

HSP 1 Score: 87.4261 bits (215), Expect = 9.903e-17
Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 0
Query:   20 FPLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVHQF-LDFFSP-LGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVF 169
             P V++ +  F++ WL   V+  LW       LP +H+    + SP L  + P         Y +    FE + + +F  VS   L + + DA +I +++ TRR  FPK ++LY RL ++G N+V+TEG+ WR+HR+V   +F+E NN LVF
Sbjct:   36 IPYVIIPVNVFSIFWL---VSFSLW-------LPILHRLPTSWTSPWLQFMHPEWA------YLLGHRPFEEIGSDIFLTVSPGRLQLWVADADVINQIT-TRRNDFPKPLKLYKRLDLYGKNVVSTEGSTWRQHRKVTAPSFSEKNNELVF 170          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|1029180426|gb|OAL45007.1| (cytochrome P450 monooxygenase-like protein [Pyrenochaeta sp. DS3sAY3a])

HSP 1 Score: 87.0409 bits (214), Expect = 1.118e-16
Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 0
Query:   20 FPLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVHQ--FLDFFSPLGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVF 169
             P ++L   TF++ WLS   T  +W  +  ++LP   Q  +LD   P               Y      FE +   +F  VS +   V + DA  I +++ TRR  FPK + +Y  L I+G N+V+TEGA WR HR++   +F E NN LVF
Sbjct:   37 LPYIILPFNTFSVFWLS---THGIWRPFLKKYLPASVQGVWLDLLHP------------EWGYHNGHKPFEAMGKDVFLVVSPKRTHVFVADAEAITQIT-TRRNDFPKPLEMYGALDIYGKNLVSTEGADWRMHRRLAAPSFGEKNNELVF 172          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|336263110|ref|XP_003346336.1| (hypothetical protein SMAC_07813 [Sordaria macrospora k-hell] >gi|380091664|emb|CCC10796.1| unnamed protein product [Sordaria macrospora k-hell])

HSP 1 Score: 84.7297 bits (208), Expect = 8.548e-16
Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 0
Query:   43 LWNSYQSRHLPCVHQFLDFFSPLGI----LFPRLLRYRSNF-YEIAPSLF---ERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVFDTAKRSLARMPG 181
            LW + ++  LP + +FL F  P  +    + P L     ++ Y  +PS     +++ +  F   S  GL  + +DA +I +V ++RR AFPK  R Y  L IFG N+VTTEG VWR HR+V  ++F E N    F  A R    M G
Sbjct:   51 LWLTTRTFLLPLLTRFLSFLLPASVYSSHIHPWLFVMTPDWEYHPSPSRHFAQQQVGSDTFIAASWNGLCCYTRDAGVIHQV-MSRREAFPKDTRQYGILEIFGSNVVTTEGQVWRMHRKVTSASFNERNAGFTFREAVRQTKGMVG 196          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|1183428125|gb|ORY52416.1| (cytochrome P450 [Rhizoclosmatium globosum])

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 0
Query:   52 LPCVHQFLDFFSPLGIL--FPRLLRYRSN-----FYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVFDTAKRSLARMPGYYQ 184
            LP V  F +  SP+  L   PR + +R        + +  S  + L + + A V S+ + V + +  L+ +V + R++   K V  Y  L IFG N++ TEG VWRRHR+VV  +F+E NN LV +++ R    M G ++
Sbjct:   40 LPIVTLFFNLESPIRTLDLIPRWIPFRIGSINVFMHHLRTSKLKELGSDMIALVDSKTVDVFVANPVLVHDVIVNRQKELGKNVNHYEMLNIFGKNVLGTEGEVWRRHRRVVAPSFSEKNNALVHESSVRIAKEMIGAWE 179          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|1046788774|gb|OCK96506.1| (cytochrome P450 monooxygenase-like protein [Cenococcum geophilum 1.58])

HSP 1 Score: 83.1889 bits (204), Expect = 2.552e-15
Identity = 49/149 (32.89%), Postives = 82/149 (55.03%), Query Frame = 0
Query:   21 PLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVHQFLDFFSPLGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVF 169
            P V+L + TF + WL   ++  LW       LP + +    ++   I F     +    Y +    FE + + +F  VS   + + + DA +I +++ TRR  FPK ++LY RL ++G N+V+TEG+ WR+HR++   +F+E NN LVF
Sbjct:   37 PYVILPVNTFNICWL---ISYPLW-------LPILQRLPTSWTSSWIQF----MHPEWAYLLCHKPFEDIGSDIFLTVSPGRIQLWVADADVINQIT-TRRNDFPKPLKLYKRLDLYGKNVVSTEGSTWRQHRKITAPSFSERNNELVF 170          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|1020705179|gb|KZM25328.1| (heme binding [Ascochyta rabiei])

HSP 1 Score: 82.4185 bits (202), Expect = 4.031e-15
Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = 0
Query:    7 SFPSSLTTVISLLFPLVLLALATFALLWLSKLVTIYLWNSYQSRHLPCVHQFLDFFSPLGILFPRLLRYRSNFYEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVFDTA 172
            S+ S++    S   P+V +    F + WL+   T Y+W       LP   + L F     +L P     + +    AP  FE+L   +F   S+  LS  + DA  + +++ TRR  FPK +++Y  L I+G N+V++EG+ WR HR++   +F E NN LVF+ +
Sbjct:   24 SWQSNIAIAKSSGLPVVAIPWNVFGVFWLA---TFYIWIPILEVILPASWRGLWF----DLLDPEWGHRKGH----AP--FEKLGKDVFIIASATRLSAFVADAEAVTQIT-TRRNDFPKPLKMYGALDIYGRNLVSSEGSDWRMHRKLTAPSFGEKNNELVFNES 175          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|684170272|ref|XP_009159007.1| (hypothetical protein HMPREF1120_06555 [Exophiala dermatitidis NIH/UT8656] >gi|378732087|gb|EHY58546.1| hypothetical protein HMPREF1120_06555 [Exophiala dermatitidis NIH/UT8656])

HSP 1 Score: 81.2629 bits (199), Expect = 1.310e-14
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 0
Query:   80 YEIAPSLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVF----DTAKRSLARMPG 181
            + +   +FER+ +  F  VS  G+ +H  D  +I +++ TRR  FPK   +Y  L I+G N+V+TEGA+WR+HR+     FTE NN LV+    D A   LA   G
Sbjct:   82 HHLGMEIFERVGSDTFLVVSPGGIMMHTADPEVISQIT-TRRNDFPKPTPIYRSLDIYGKNVVSTEGAMWRQHRKATSPPFTEKNNHLVWAESIDQASAMLASWVG 186          
BLAST of EWM25219.1 vs. NCBI_GenBank
Match: gi|85101872|ref|XP_961225.1| (hypothetical protein NCU04234 [Neurospora crassa OR74A] >gi|28922767|gb|EAA31989.1| hypothetical protein NCU04234 [Neurospora crassa OR74A] >gi|725983044|gb|KHE86083.1| cytochrome P450 [Neurospora crassa])

HSP 1 Score: 81.2629 bits (199), Expect = 1.373e-14
Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   80 YEIAP-SLFERLQTPLFAFVSSRGLSVHIKDAHLIREVSITRRRAFPKAVRLYNRLRIFGDNIVTTEGAVWRRHRQVVRSAFTESNNRLVFDTAKRSLARMPG 181
            Y  +P S F RL +  F   S  GL+ +  DA +I +V ++RR AFPK  R Y  L IFG N+VTTEG VWR HR+V  ++F E N    F  A R    M G
Sbjct:   84 YHPSPRSHFTRLGSDTFVVASWNGLACYTSDAAVISQV-MSRREAFPKDTRQYGILEIFGSNVVTTEGQVWRMHRKVTSASFNERNAGHTFREAVRQTRGMVG 185          
The following BLAST results are available for this feature:
BLAST of EWM25219.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106907|gb|EWM25219.1|5.731e-130100.00cytochrome p450 [Nannochloropsis gaditana][more]
gi|1046776202|gb|OCK84471.1|2.133e-1736.53cytochrome P450 [Lepidopterella palustris CBS 459.... [more]
gi|1046804971|gb|OCL10703.1|9.903e-1734.87cytochrome P450 monooxygenase-like protein [Gloniu... [more]
gi|1029180426|gb|OAL45007.1|1.118e-1634.21cytochrome P450 monooxygenase-like protein [Pyreno... [more]
gi|336263110|ref|XP_003346336.1|8.548e-1636.05hypothetical protein SMAC_07813 [Sordaria macrospo... [more]
gi|1183428125|gb|ORY52416.1|1.095e-1533.57cytochrome P450 [Rhizoclosmatium globosum][more]
gi|1046788774|gb|OCK96506.1|2.552e-1532.89cytochrome P450 monooxygenase-like protein [Cenoco... [more]
gi|1020705179|gb|KZM25328.1|4.031e-1531.93heme binding [Ascochyta rabiei][more]
gi|684170272|ref|XP_009159007.1|1.310e-1439.62hypothetical protein HMPREF1120_06555 [Exophiala d... [more]
gi|85101872|ref|XP_961225.1|1.373e-1444.66hypothetical protein NCU04234 [Neurospora crassa O... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5466rna5466Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications