EWM25238.1, cds5442 (CDS) Nannochloropsis gaditana

Overview
NameEWM25238.1
Unique Namecds5442
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:1043521..1043524 -
Alignment locationCM002465.1:1043235..1043430 -
Alignment locationCM002465.1:1043022..1043160 -

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Properties
Property NameValue
Protein idEWM25238.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100089g8.9647.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:1043521..1043524 -
CM002465.1supercontigCM002465.1:1043235..1043430 -
CM002465.1supercontigCM002465.1:1043022..1043160 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25238.1 vs. NCBI_GenBank
Match: gi|585106930|gb|EWM25238.1| (hypothetical protein Naga_100089g8 [Nannochloropsis gaditana])

HSP 1 Score: 235.728 bits (600), Expect = 1.015e-78
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 
Query:    1 MPNAERSCLGCFVHDSRVFNAKWAAAASLLFSSISQFIETKLRLHQRSVCSICIYRFKMIARVDHFTKSLTRNKPHQEFWKPMHHMGNKRCYLRFLHSADTFSRLGEIKLMA 112
            MPNAERSCLGCFVHDSRVFNAKWAAAASLLFSSISQFIETKLRLHQRSVCSICIYRFKMIARVDHFTKSLTRNKPHQEFWKPMHHMGNKRCYLRFLHSADTFSRLGEIKLMA
Sbjct:    1 MPNAERSCLGCFVHDSRVFNAKWAAAASLLFSSISQFIETKLRLHQRSVCSICIYRFKMIARVDHFTKSLTRNKPHQEFWKPMHHMGNKRCYLRFLHSADTFSRLGEIKLMA 112
The following BLAST results are available for this feature:
BLAST of EWM25238.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106930|gb|EWM25238.1|1.015e-78100.00hypothetical protein Naga_100089g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5455rna5455Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications