EWM25243.1, cds5430 (CDS) Nannochloropsis gaditana

Overview
NameEWM25243.1
Unique Namecds5430
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:1007608..1007673 -
Alignment locationCM002465.1:1007393..1007486 -
Alignment locationCM002465.1:1007152..1007243 -
Alignment locationCM002465.1:1006783..1006971 -
Alignment locationCM002465.1:1006364..1006528 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25243.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101074g2.3867.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced; peptidyl-prolyl cis-trans
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:1007608..1007673 -
CM002465.1supercontigCM002465.1:1007393..1007486 -
CM002465.1supercontigCM002465.1:1007152..1007243 -
CM002465.1supercontigCM002465.1:1006783..1006971 -
CM002465.1supercontigCM002465.1:1006364..1006528 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
IPR023114Elongated_TPR_rpt_dom
Homology
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|585106936|gb|EWM25243.1| (hypothetical protein Naga_101074g2 [Nannochloropsis gaditana] >gi|585106937|gb|EWM25244.1| hypothetical protein Naga_101074g2 [Nannochloropsis gaditana])

HSP 1 Score: 408.297 bits (1048), Expect = 4.048e-144
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
Query:    1 MAATAADGEWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLHVGGREGGGREGGREWMKKGGERNVV 201
            MAATAADGEWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLHVGGREGGGREGGREWMKKGGERNVV
Sbjct:    1 MAATAADGEWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLHVGGREGGGREGGREWMKKGGERNVV 201          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|695377645|ref|XP_009516060.1| (hypothetical protein PHYSODRAFT_537442 [Phytophthora sojae] >gi|348688971|gb|EGZ28785.1| hypothetical protein PHYSODRAFT_537442 [Phytophthora sojae])

HSP 1 Score: 203.371 bits (516), Expect = 9.051e-60
Identity = 101/174 (58.05%), Postives = 125/174 (71.84%), Query Frame = 0
Query:    3 ATAADGEWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLH 176
            A A   E +D+SGDGG+LK+   EG GE PP G+E+ AHYTGTL  DGT+FDSSR RN  FKF +G G VIK WDL FA+MKVGE A+L C+ +Y YG SGSPP IP  ATL FDVELL F+PK KE WEM AEE++AEA KLK      FK +++  AA+ Y  AAS+++ ++
Sbjct:    2 ADATKKEPVDLSGDGGVLKETYVEGSGEFPPAGDEIRAHYTGTL-LDGTKFDSSRDRNSEFKFVLGKGNVIKAWDLAFASMKVGEKAVLTCKPEYAYGASGSPPKIPANATLKFDVELLGFSPKAKEMWEMDAEEKIAEATKLKAKGTEQFKAKQFETAAATYNQAASHMEDMY 174          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|325179803|emb|CCA14206.1| (peptidylprolyl cistrans isomerase putative [Albugo laibachii Nc14])

HSP 1 Score: 202.986 bits (515), Expect = 1.100e-59
Identity = 99/166 (59.64%), Postives = 122/166 (73.49%), Query Frame = 0
Query:   11 IDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLH 176
            ID++GDGG+LK+I ++G GE+PPDG E+ AHYTGTL  DGT FDSSR R+  F F +G G VIK WD  FATMKVGE A+L C+ +Y YGE+GSPP IP  ATL FDVELL FA KKKE WEMS  E+M E  KLK      FK Q++ +AA++Y + ASY+D L+
Sbjct:   12 IDLTGDGGVLKEIYQDGTGETPPDGYEIRAHYTGTL-LDGTVFDSSRDRDSEFTFVLGKGNVIKAWDSAFATMKVGERAMLTCKPEYAYGEAGSPPKIPANATLKFDVELLGFAEKKKESWEMSTAEKMEECTKLKAEGTELFKTQKYAEAAAKYEEGASYLDDLY 176          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|673021748|ref|XP_008864835.1| (hypothetical protein H310_02921 [Aphanomyces invadans] >gi|574479766|gb|ETW06760.1| hypothetical protein H310_02921 [Aphanomyces invadans])

HSP 1 Score: 198.749 bits (504), Expect = 4.132e-58
Identity = 98/166 (59.04%), Postives = 116/166 (69.88%), Query Frame = 0
Query:   11 IDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLH 176
            ID++ DGG+ K+IL EG GE PP G E+ AHYTGTL  DGT+FDSSR RNQ F F +G G VIK WDLGFATMKVGE AIL C  +Y YG SGSPP IPP ATL FDVELL F+PKKKE WEMS +E++ EA   K+     FK  ++  A   Y++ A Y +  H
Sbjct:    4 IDLTTDGGVKKEILSEGTGEFPPKGYEIRAHYTGTL-LDGTKFDSSRDRNQVFTFVLGKGNVIKAWDLGFATMKVGERAILTCAPEYAYGASGSPPKIPPNATLKFDVELLGFSPKKKEMWEMSVDEKLKEAETSKQQGTALFKAGKFAQANEAYLEGAKYTESDH 168          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|635371113|emb|CCI40769.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 197.978 bits (502), Expect = 9.310e-58
Identity = 98/168 (58.33%), Postives = 122/168 (72.62%), Query Frame = 0
Query:    9 EWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLH 176
            + ID++GDGG+LK+I +EG GE PP+G E+ AHYTG+L  DGT FDSSR R+  F F +G G VIK WD  FATMKVGE A+L C+ +Y YGE+GSPP IP  ATL FDVELL FA KKKE WEMS EE++ E  KLK      FK Q++ +AA++Y   ASY+D L+
Sbjct:   10 DVIDLTGDGGVLKEIQQEGTGEIPPNGYEIRAHYTGSL-LDGTVFDSSRDRDSEFTFVLGKGNVIKAWDTAFATMKVGERAMLTCKPEYAYGEAGSPPKIPANATLKFDVELLGFAEKKKESWEMSTEEKVEECTKLKAEGTELFKTQQYEEAAAKYEKGASYMDDLY 176          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|635371112|emb|CCI40768.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 197.593 bits (501), Expect = 1.150e-57
Identity = 98/168 (58.33%), Postives = 122/168 (72.62%), Query Frame = 0
Query:    9 EWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLH 176
            + ID++GDGG+LK+I +EG GE PP+G E+ AHYTG+L  DGT FDSSR R+  F F +G G VIK WD  FATMKVGE A+L C+ +Y YGE+GSPP IP  ATL FDVELL FA KKKE WEMS EE++ E  KLK      FK Q++ +AA++Y   ASY+D L+
Sbjct:    5 DVIDLTGDGGVLKEIQQEGTGEIPPNGYEIRAHYTGSL-LDGTVFDSSRDRDSEFTFVLGKGNVIKAWDTAFATMKVGERAMLTCKPEYAYGEAGSPPKIPANATLKFDVELLGFAEKKKESWEMSTEEKVEECTKLKAEGTELFKTQQYEEAAAKYEKGASYMDDLY 171          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|219127921|ref|XP_002184174.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404405|gb|EEC44352.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 196.052 bits (497), Expect = 5.580e-57
Identity = 104/167 (62.28%), Postives = 122/167 (73.05%), Query Frame = 0
Query:   10 WIDVS--GDGGLLKKILKE---GEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASY 171
            WIDVS   DGG+ KKIL+E   G    PPDG EV AHYTGTL SDG++FDSS  R +PF FTIG GQVIKGWD GFA+MKVGE A+L+ R DYGYG+SGSPP IP  ATL F+VELL    K+KEKWEMS +ER+  A KLK      F++Q++ DA + Y DAASY
Sbjct:    8 WIDVSKAQDGGVKKKILQEAPDGATGPPPDGYEVTAHYTGTLTSDGSKFDSSVDRGKPFNFTIGQGQVIKGWDEGFASMKVGEKAMLEIRSDYGYGDSGSPPKIPGGATLNFEVELLGLKEKRKEKWEMSTQERLEVANKLKTEGTELFQQQKFKDAVALYEDAASY 174          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|953498800|emb|CEG39850.1| (peptidyl-prolyl cis-trans isomerase [Plasmopara halstedii])

HSP 1 Score: 195.667 bits (496), Expect = 6.754e-57
Identity = 95/168 (56.55%), Postives = 122/168 (72.62%), Query Frame = 0
Query:    9 EWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLH 176
            E +D+SGDGG+LK+   EG GE PP G+E+ AHYTGTL  DGT+FDSSR R+  FKF +G G VIK WDL FA+M+VGE A+L C+ +Y YG +GSPP IP  ATL FDVELL F+PK KE WEM   E++ +A KLK      FK +++G AAS Y DAAS+++ ++
Sbjct:    8 EPVDLSGDGGVLKETYFEGSGECPPAGDEIRAHYTGTL-LDGTKFDSSRDRDSEFKFVLGKGNVIKAWDLAFASMRVGEKAMLTCKPEYAYGANGSPPKIPANATLKFDVELLGFSPKAKEMWEMDTAEKVDQATKLKAMGTEQFKAKQFGIAASTYNDAASFMEDMY 174          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|1072227975|gb|OEU12713.1| (Pro_isomerase-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 196.052 bits (497), Expect = 7.353e-57
Identity = 102/171 (59.65%), Postives = 127/171 (74.27%), Query Frame = 0
Query:    7 DGEWIDVS--GDGGLLKKILK---EGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYV 172
            D  ++DVS   DGG+ KKIL    EG    PP+GNEV AHYTGTL SDG++FDSSR R +PFKFT+G+GQVIKGWD GFA+MKVGE A+LK R DY YGE+GSPPTIP KA L FDVELL F  K K+++EM+ EER+  A KLK      FKE+R+ + A++Y ++A +V
Sbjct:    4 DESFVDVSVAQDGGIKKKILTAAPEGALGPPPNGNEVEAHYTGTLVSDGSKFDSSRDRGKPFKFTLGIGQVIKGWDEGFASMKVGEKAMLKVRYDYAYGETGSPPTIPAKADLFFDVELLGFKEKPKQRYEMNTEERIVYATKLKTEGTELFKEKRFEEGAAKYEESALFV 174          
BLAST of EWM25243.1 vs. NCBI_GenBank
Match: gi|567945273|gb|ETK71084.1| (peptidyl-prolyl cis-trans isomerase [Phytophthora parasitica] >gi|567973878|gb|ETL24530.1| peptidyl-prolyl cis-trans isomerase [Phytophthora parasitica] >gi|568033301|gb|ETM31016.1| peptidyl-prolyl cis-trans isomerase [Phytophthora parasitica] >gi|570311493|gb|ETO59441.1| peptidyl-prolyl cis-trans isomerase [Phytophthora parasitica P1976] >gi|570935224|gb|ETP00481.1| peptidyl-prolyl cis-trans isomerase [Phytophthora parasitica CJ01A1] >gi|570965519|gb|ETP28638.1| peptidyl-prolyl cis-trans isomerase [Phytophthora parasitica P10297])

HSP 1 Score: 194.897 bits (494), Expect = 1.253e-56
Identity = 103/174 (59.20%), Postives = 125/174 (71.84%), Query Frame = 0
Query:    3 ATAADGEWIDVSGDGGLLKKILKEGEGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSPPTIPPKATLCFDVELLSFAPKKKEKWEMSAEERMAEALKLKEGAAGHFKEQRWGDAASEYMDAASYVDGLH 176
            A A   E +D+SGDGG+LK+   EG GE PP G+E+ AHYTGTL  DGT+FDSSR RN  FKF +G G VIK WDL FA+MKVGE AIL C+ +Y YG SGSPP IP  ATL FDVELL F+PK KE WEM AEE++AEA KLK      FK +++  AA+ Y  AASY++ ++
Sbjct:    2 AEATKKEPVDLSGDGGVLKETYVEGSGEFPPAGDEIRAHYTGTL-LDGTKFDSSRDRNSEFKFVLGKGNVIKAWDLAFASMKVGEKAILTCKPEYAYGASGSPPKIPANATLKFDVELLGFSPKAKEMWEMDAEEKIAEATKLKAKGTEQFKAKQFDTAAATYTQAASYMEDMY 174          
The following BLAST results are available for this feature:
BLAST of EWM25243.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106936|gb|EWM25243.1|4.048e-144100.00hypothetical protein Naga_101074g2 [Nannochloropsi... [more]
gi|695377645|ref|XP_009516060.1|9.051e-6058.05hypothetical protein PHYSODRAFT_537442 [Phytophtho... [more]
gi|325179803|emb|CCA14206.1|1.100e-5959.64peptidylprolyl cistrans isomerase putative [Albugo... [more]
gi|673021748|ref|XP_008864835.1|4.132e-5859.04hypothetical protein H310_02921 [Aphanomyces invad... [more]
gi|635371113|emb|CCI40769.1|9.310e-5858.33unnamed protein product [Albugo candida][more]
gi|635371112|emb|CCI40768.1|1.150e-5758.33unnamed protein product [Albugo candida][more]
gi|219127921|ref|XP_002184174.1|5.580e-5762.28predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|953498800|emb|CEG39850.1|6.754e-5756.55peptidyl-prolyl cis-trans isomerase [Plasmopara ha... [more]
gi|1072227975|gb|OEU12713.1|7.353e-5759.65Pro_isomerase-domain-containing protein [Fragilari... [more]
gi|567945273|gb|ETK71084.1|1.253e-5659.20peptidyl-prolyl cis-trans isomerase [Phytophthora ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5443rna5443Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications