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Properties
| Property Name | Value |
|---|
| Product | translation initiation factor eif-2b subunit alpha |
| Orig transcript id | gnl|cribi|Naga_100135g14.5865.mrna |
| Orig protein id | gnl|cribi|Naga_100135g14.5865 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:828728..830036 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5372 ID=rna5372|Name=rna5372|organism=Nannochloropsis gaditana|type=mRNA|length=1101bp
ATGCGAGGAACCTATGCGATGGCGGCGGTGACCGTGGTCACTACCGCATG
CTTCTCTCTTCAACGTGTTGATGCCTTCATCGGAGCTGGCGTGAAAGCCC
GACTCCCTTCCTTGTCGCGCGTGCACGCACAAAAGCCTTACCACGTGTTT
GACACCAAAGAATCTTTTGCGCCGACTATTCCTGGTTTGCCTGTAAGTCC
GGAAGCACTGGATCTGAAAACCATTGCGCAGGGGGTGACATTTGTAGCCC
CACTAGTCCTGGGAGCTTCGGACGCTATGGCCAAGGGGGGGGAGTACGGT
ATCCTGGAAGGACGGAGCTTCGCCTTCGTGCACCCGATTGTCATGGGGGC
TTTGTTTTTGACCACCGCCTACACGGGGTACTTGGGCTGGCAGTTCCGAA
CCATCCGTACGTTGGCGGGGGAGATGAGCGCGTTAAAAGACTCGCTGCCC
AAACTTTCGGACGGGAGCAAGGTGACCTTGCCGGTCTCGAAACAGATCGC
CTCGGTGGAGAGTGCCTTGAAGAACATGGGAGAAGGCGATGAGGAAGCGA
AGCAATTGAAAGCAGACCTGAACCTGCTGCGTTCGCCCGGCGTGGCCGTT
CTGGACACGCAGATGGCCGCATTGAGCGAGAAGCGCAAGACTTTGCTTGC
AGGCGATTTCCGAGACCGGCACTACAACACGGCCTCCACGCTCCTAGGGC
TGGGAGTCTTCACCTCCATTCTGGGCGGCTTCAATACCTTTTTCCGCTCC
GGGAAGCTGTTTCCCGGACCCCACCTGTACGCAGGAGCAGGAATAACAGT
CTTGTGGGCGGTGGCGGCCTCCATGGTGCCGGCGATGCAGAAAGGCAACG
AGACTGCCCGCTCGCTGCACATCGGCTTGAACGCATTGAACCTGGCTTTG
TTCGCGTGGCAGGTGGGAACGGGGCTGGAGATTGCCATCAAGGGTATTTG
TGTGGTTGAGGGTGGAGCCCTGTGTCGCCACACGATGATCGGATTGAAGG
ACAACCTGAGAATGCCCCCGTCCGATTCAAAACTGAAACATTGTTTTTTT
CGGCGAGGATCTGAAGAAAAATATATATATATTGAGAGACAAGAGACTTG
A back to topprotein sequence of rna5372 >rna5372-protein ID=rna5372-protein|Name=rna5372|organism=Nannochloropsis gaditana|type=polypeptide|length=409bp
MPAHMPSVLFAYSYHSDALSYSLPCTIYFDTANAPVMEAALEPSIPPSNL
PSHSSAPSSDDPLLSVFRSHLEKNVPVPIAGVQTLLHVMSSSRAVTIMGI
QNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFET
LNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVL
IRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFME
RVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARL
YPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGS
SGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAV
SDELIKLYQ back to topmRNA from alignment at CM002465.1:828728..830036- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5372 ID=rna5372|Name=rna5372|organism=Nannochloropsis gaditana|type=mRNA|length=1309bp|location=Sequence derived from alignment at CM002465.1:828728..830036- (Nannochloropsis gaditana)
ACCCTGACGGCCCCTGATACTCCCTCATTCTGATGCCTGCTCATATGCCC
TCCGTCCTATTTGCCTACAGTTATCACTCTGATGCTTTATCGTATTCCTT
GCCATGCACCATTTACTTCGATACAGCCAACGCTCCTGTAATGGAAGCAG
CTCTTGAGCCTTCAATACCCCCTTCAAACTTGCCCTCCCATTCCTCAGCT
CCATCGTCGGATGACCCTCTTTTATCCGTCTTTCGAAGTCATTTGGAGAA
AAATGTTCCCGTCCCTATAGCAGGGGTGCAGACTCTCCTCCATGTGATGA
GTAGCAGTCGTGCGGTCACAATAATGGGAATTCAAAATGATCTCAAAGCA
GCGACGAGCGAGTTAATTGAATATGAACGGAGGATAAGTGGTGGTCGGGC
CTCCATTTCCTTCCGTGCCTGCGTCGAGCTTTTTTTCCGGTATGCAACAC
GCAAGAACGACGATGTCCCTGATTTTGAGACGCTGAACAAACTTTTCATC
GCACGTGGACATCATTTTGTGGCGAATGCTTTGAAGAGCCGGCTTGGGAT
TGCCGAGCTCGGGCATAGCTTCGTGCAAGATGGCATGATGATCCTCACCC
ACGGACGCTCCGAAGTCGTCACCGGCGTCCTCATCCGTGCTGCACAAAGC
AACAAAAATTTCACGGTGATGGTGACGGAAGGACGTCCGGAAGGGTCAGG
TTTCAAAGCCGCCGAGCGTTTGACAGAAGCCGGGATCCCCGTCACGGTGA
TATTGGACTCGGCCGCCGCATACTTCATGGAGCGCGTCGACATAGTCTTG
CTCGGAGCAGAGGGCGTGGTTGAAAGCGGAGGGATCGTGAACAAAATTGG
GACGTGTCAATTGGCCATGGTGGCGAAGTTGTACAACAAGCCTTTGTATG
TGGCGGCTGAATCATACAAGTTTGCTCGCTTGTACCCGCTGACACAGGCC
GACTTGGAGGACAATGTAGACAACGACGTAGAGAAACCACTGTTTCCACC
TTTACTTACCGGCATAGAGGGTGGGACGGCAACGGGGAAGGTGGAGGAGG
GGGAAGGGCGGCATAGACAGGAGAGGGGAAGCTCGGGGAACCTATTAGGT
AAGAACACCATTTTCGACAGCGGGCCCGGCGTTGCCGCCATGACGACGAA
GAACCCCAGCTGCGACTATACGCCTGCCCAGTACATCAGCCTTCTGTTTA
CAGATCTGGGAATTTTGACGCCGGCTGCCGTTTCGGACGAGCTGATCAAG
CTTTATCAATGACAAGGCTCCCACGGGGACAAAAGAAAGCAACTAGCAAT
CGATATCAA back to topCoding sequence (CDS) from alignment at CM002465.1:828728..830036- >rna5372 ID=rna5372|Name=rna5372|organism=Nannochloropsis gaditana|type=CDS|length=1230bp|location=Sequence derived from alignment at CM002465.1:828728..830036- (Nannochloropsis gaditana)
ATGCCTGCTCATATGCCCTCCGTCCTATTTGCCTACAGTTATCACTCTGA
TGCTTTATCGTATTCCTTGCCATGCACCATTTACTTCGATACAGCCAACG
CTCCTGTAATGGAAGCAGCTCTTGAGCCTTCAATACCCCCTTCAAACTTG
CCCTCCCATTCCTCAGCTCCATCGTCGGATGACCCTCTTTTATCCGTCTT
TCGAAGTCATTTGGAGAAAAATGTTCCCGTCCCTATAGCAGGGGTGCAGA
CTCTCCTCCATGTGATGAGTAGCAGTCGTGCGGTCACAATAATGGGAATT
CAAAATGATCTCAAAGCAGCGACGAGCGAGTTAATTGAATATGAACGGAG
GATAAGTGGTGGTCGGGCCTCCATTTCCTTCCGTGCCTGCGTCGAGCTTT
TTTTCCGGTATGCAACACGCAAGAACGACGATGTCCCTGATTTTGAGACG
CTGAACAAACTTTTCATCGCACGTGGACATCATTTTGTGGCGAATGCTTT
GAAGAGCCGGCTTGGGATTGCCGAGCTCGGGCATAGCTTCGTGCAAGATG
GCATGATGATCCTCACCCACGGACGCTCCGAAGTCGTCACCGGCGTCCTC
ATCCGTGCTGCACAAAGCAACAAAAATTTCACGGTGATGGTGACGGAAGG
ACGTCCGGAAGGGTCAGGTTTCAAAGCCGCCGAGCGTTTGACAGAAGCCG
GGATCCCCGTCACGGTGATATTGGACTCGGCCGCCGCATACTTCATGGAG
CGCGTCGACATAGTCTTGCTCGGAGCAGAGGGCGTGGTTGAAAGCGGAGG
GATCGTGAACAAAATTGGGACGTGTCAATTGGCCATGGTGGCGAAGTTGT
ACAACAAGCCTTTGTATGTGGCGGCTGAATCATACAAGTTTGCTCGCTTG
TACCCGCTGACACAGGCCGACTTGGAGGACAATGTAGACAACGACGTAGA
GAAACCACTGTTTCCACCTTTACTTACCGGCATAGAGGGTGGGACGGCAA
CGGGGAAGGTGGAGGAGGGGGAAGGGCGGCATAGACAGGAGAGGGGAAGC
TCGGGGAACCTATTAGGTAAGAACACCATTTTCGACAGCGGGCCCGGCGT
TGCCGCCATGACGACGAAGAACCCCAGCTGCGACTATACGCCTGCCCAGT
ACATCAGCCTTCTGTTTACAGATCTGGGAATTTTGACGCCGGCTGCCGTT
TCGGACGAGCTGATCAAGCTTTATCAATGA back to top
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