EWM25308.1, cds5359 (CDS) Nannochloropsis gaditana

Overview
NameEWM25308.1
Unique Namecds5359
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:828775..830004 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25308.1
Producttranslation initiation factor eif-2b subunit alpha
Orig transcript idgnl|cribi|Naga_100135g14.5865.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:828775..830004 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
Homology
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|585107063|gb|EWM25308.1| (translation initiation factor eif-2b subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 839.721 bits (2168), Expect = 0.000e+0
Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
Query:    1 MPAHMPSVLFAYSYHSDALSYSLPCTIYFDTANAPVMEAALEPSIPPSNLPSHSSAPSSDDPLLSVFRSHLEKNVPVPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
            MPAHMPSVLFAYSYHSDALSYSLPCTIYFDTANAPVMEAALEPSIPPSNLPSHSSAPSSDDPLLSVFRSHLEKNVPVPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ
Sbjct:    1 MPAHMPSVLFAYSYHSDALSYSLPCTIYFDTANAPVMEAALEPSIPPSNLPSHSSAPSSDDPLLSVFRSHLEKNVPVPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|1173940398|gb|OQR89827.1| (translation initiation factor eIF-2B subunit alpha [Thraustotheca clavata])

HSP 1 Score: 277.33 bits (708), Expect = 1.226e-87
Identity = 157/338 (46.45%), Postives = 210/338 (62.13%), Query Frame = 0
Query:   77 VPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIE-----YERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
            + +A ++TL  V+    A T+M I+N L+ A ++L        ++ I+   +SIS  A  +LF RY TR   +  DF+      I RG  FVA +L SR  IA+LGH+FV+DGM +LTHG S VVTG+L++AA++ K+F+V+VTEGRP  +G+K AE L++AGIP TVI+D+A  Y+ME+VD+V++GAEGVVE+GGIVNKIGT   AM+A    KP YVAAES+KFARLYPL Q+D   N  ++                                          N   ++ P    MT  +P+CDYTP  YISLLFTDLG+LTP+AVSDELIKLYQ
Sbjct:   20 IAVAVIKTLTGVIQRCNASTMMEIENALQEAAAQLKAAADTPVDKSIT--LSSISVTAVCQLFLRYVTRCFLEFADFDQCKAQLIDRGKMFVATSLTSRKRIADLGHNFVRDGMQVLTHGASRVVTGLLLQAAKT-KHFSVVVTEGRPNNAGYKTAEVLSKAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESFKFARLYPLNQSDFPHNCTDE------------------------------------------NVPSETHPN---MTVGSPTCDYTPPHYISLLFTDLGVLTPSAVSDELIKLYQ 309          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|669137162|ref|XP_008604149.1| (hypothetical protein SDRG_00450 [Saprolegnia diclina VS20] >gi|530744484|gb|EQC42726.1| hypothetical protein SDRG_00450 [Saprolegnia diclina VS20])

HSP 1 Score: 275.404 bits (703), Expect = 1.055e-86
Identity = 160/350 (45.71%), Postives = 213/350 (60.86%), Query Frame = 0
Query:   67 FRSHLEK-NVPVPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRA------SISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
            F ++L+  +  + +A ++ L  V+  S A T+M I++    A +E     +  + G A      SIS  A  +LF RY TR   +  DF+      I RG  F   +L SR  IA+LGH+FV+DGM +LTHG S VVTG+L++AA++ K+F+V+VTEGRP G+G+K AE L++AGIP TVI+D+A  Y+ME+VD+V++GAEGVVE+GGIVNKIGT   AM+A    KP YVAAESYKFARLYPL Q+D   +  +D+     P                      R +  +  NL                T  +PSCDYTP  YISLLFTDLG+LTP+AVSDELIKLYQ
Sbjct:    9 FLAYLQDPDSAIAVAVIKALTGVVQRSSASTMMEIES----ALTEAAAQLKAAADGPAPTQALSSISVTAVCQLFLRYVTRCFLEFDDFDQCKSQLIDRGKLFAETSLLSRKRIADLGHNFVRDGMQVLTHGASRVVTGLLLQAAKT-KHFSVLVTEGRPNGAGYKTAEVLSKAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSAAMIAHAMKKPFYVAAESYKFARLYPLNQSDFPHSRKDDMSN--LPACAC------------------RPKTTAQANL----------------TVGSPSCDYTPPHYISLLFTDLGVLTPSAVSDELIKLYQ 317          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|1173943027|gb|OQR91934.1| (translation initiation factor eIF-2B subunit alpha [Achlya hypogyna])

HSP 1 Score: 270.781 bits (691), Expect = 5.381e-85
Identity = 156/336 (46.43%), Postives = 206/336 (61.31%), Query Frame = 0
Query:   77 VPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGR---ASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
            + +A ++ L  V+  S A T+M I++ L  A + L       +  +   +SIS  A  +LF RY TR   +  DF+      I RG  F   +L SR  IA+LGH+FV+DGM +LTHG S VVTG+L++AA++ K+F+V+VTEGRP G+G+K AE L+ AGIP TVI+D+A  Y+ME+VD+V++GAEGVVE+GGIVNKIGT   AM+A    KP YVAAES+KFARLYPL Q+D   N  +D          T ++   A         +H                         +T  +PSCDYTP  YISLLFTDLG+LTP+AVSDELIKLYQ
Sbjct:   20 IAVAVIKALTGVVQRSSASTMMEIESALTDAAAALKAAADGPAASKVQLSSISVTAVCQLFLRYVTRCFLEFDDFDQCKSQLIDRGKLFAETSLLSRKRIADLGHNFVRDGMKVLTHGASRVVTGLLLQAAKT-KHFSVVVTEGRPNGAGYKTAELLSNAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSAAMIAHAMKKPFYVAAESFKFARLYPLNQSDFPHNRHDD----------TTLDAAVA---------KHPN-----------------------LTVGSPSCDYTPPHYISLLFTDLGVLTPSAVSDELIKLYQ 312          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|698797218|ref|XP_009831638.1| (hypothetical protein H257_07709 [Aphanomyces astaci] >gi|574113429|gb|ETV78919.1| hypothetical protein H257_07709 [Aphanomyces astaci])

HSP 1 Score: 266.544 bits (680), Expect = 5.441e-83
Identity = 156/350 (44.57%), Postives = 205/350 (58.57%), Query Frame = 0
Query:   77 VPIAGVQTLLHVMSSSRAVTIMGIQNDLK--------------AATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSG---PGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
            + +A ++ L  V+  S A T+M +++ L+               A ++ I      +   +SIS  A  +LF RY TR   +  DF+      I RG  F   +  SR  I + GH+FV+DGM++LTHG S VVT VL++AA+S K+F+V+VTEGRP G+G+K AE L+ AGIP TVI+D+A  Y+MERV +V++GAEGVVE+GGIVNKIGT   AM+A    KP YVAAESYKFARLYPL Q D             FP                      R+   S  ++L  +   D     P    +T  +P+CDYTP QYISLLFTDLG+LTP+AVSDELIKLYQ
Sbjct:   23 IAVAVIKVLTGVIQHSEASTMMEMESALQDAASQLKAAAAANSPADNKNIATHSTSAQSLSSISVTAGCQLFLRYVTRCFLEFDDFDQCKSQLIDRGKLFAETSSTSRKRIVDFGHNFVRDGMVVLTHGASRVVTKVLLQAAKS-KHFSVVVTEGRPNGAGYKTAELLSNAGIPTTVIVDAAMGYYMERVSMVIVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESYKFARLYPLNQHD-------------FP--------------------HSRRTDESVVSMLAPSCTCDPELVLPSHPLLTAGSPACDYTPPQYISLLFTDLGVLTPSAVSDELIKLYQ 338          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|831766495|ref|XP_012751808.1| (hypothetical protein SAMD00019534_084630, partial [Acytostelium subglobosum LB1] >gi|735852440|dbj|GAM25288.1| hypothetical protein SAMD00019534_084630, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 264.233 bits (674), Expect = 3.017e-82
Identity = 147/341 (43.11%), Postives = 197/341 (57.77%), Query Frame = 0
Query:   72 EKNVPVPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADL----EDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLY 408
            E++  + IA ++ L  V+  S+A TIMG+Q +L  AT  L + E        SIS  +  ELF R+ TR + D P+FE      I RG      +L SR  I++L + F++DG+ IL HG S VV  VL+ A+Q  K F+V+VTE RP+ SG+K A +L +A IPVT+I+D  AA  +++VD VL GAE +VE+GGIVNKIGT Q+++VAK + KP YVAAES+KF R YPL Q+D+    +DN D            T         K E  E                            +T  +PS DYTP  YI+LLFT+LG+LTP+AVSDELIKLY
Sbjct:   27 EQDTAIAIAAIKVLTEVIRRSQAATIMGLQKELANATVHLKQCE-----FNTSISLSSVCELFIRFVTRTSLDFPNFEQCKVTLIERGEQLSNKSLMSRSKISQLSNKFIRDGVTILVHGFSRVVLSVLLSASQQGKRFSVIVTESRPDSSGYKLASKLQDAKIPVTLIMDGGAARIIDKVDYVLCGAEAIVENGGIVNKIGTYQISIVAKAFKKPFYVAAESFKFTRSYPLDQSDIVILKKDNDD------------TTFNLCQQCSKCEHPE---------------------------RLTIDSPSLDYTPPSYITLLFTELGVLTPSAVSDELIKLY 323          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|953496497|emb|CEG42097.1| (protein [Plasmopara halstedii])

HSP 1 Score: 261.922 bits (668), Expect = 1.860e-81
Identity = 148/333 (44.44%), Postives = 201/333 (60.36%), Query Frame = 0
Query:   82 VQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRA-----SISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
            ++ L  V+  S A T+M ++++L+AA  +L  ++      RA     SI+  A  +LF RY TR   +  DF+      I RG  F   +L SR  I+++GH+F++DGM +LTHG+S VV   L+R A   KNF+V VTEGR  GSG + AE L +AGIP TVILDSA AY+ME++DIV++GAEGVVE+GGIVN +GT  +A++A+   K  YVAAESYKFARLYPLTQ         DV +     + + + GG A   ++E  G                           ++  +P  DYTP  YI+L+FTDLG+LTP+AVSDELIKLYQ
Sbjct:   27 IKALTGVIIRSEASTMMQMESELQAAAQQLRAFQAADDDARATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIA-LLREAARTKNFSVFVTEGRSNGSGVRTAEELAKAGIPTTVILDSAVAYYMEQIDIVIVGAEGVVENGGIVNSVGTYSIAVIAQALKKQFYVAAESYKFARLYPLTQ--------RDVPQKQMGAITSNMAGGEA---IDEAVGH--------------------------ISFTSPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 321          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|545711074|ref|XP_005707844.1| (translation initiation factor eIF-2B alpha subunit [Galdieria sulphuraria] >gi|452824320|gb|EME31324.1| translation initiation factor eIF-2B alpha subunit [Galdieria sulphuraria])

HSP 1 Score: 261.151 bits (666), Expect = 5.188e-81
Identity = 147/357 (41.18%), Postives = 205/357 (57.42%), Query Frame = 0
Query:   53 HSSAPSSDDPLLSVFRSHLEKNVPVPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
            H    +  + ++ +F   L        A    L  V+ SS   T+MG++  LK AT  ++    +++   A +S +A  ELF R+  R + ++ DFE   +  I RG +F      SR  IA++G  F+QDG +ILTHG S VV  V  RAA + K F V VTE RP+GSG+  AERL  AGI VT+ILDS   + M++VD+VL+GAEGV E+GGI+N+IG+ Q+A+VA+ Y+KP++VA ESYKF+R+YPL Q DL   +  +  +P +P L                                  + FD   G+     +NP+ D+TP   ISLLFTDLG+LTPAAVSDELI+LYQ
Sbjct:   10 HEQEITFQNNVIELFERQLAAGSAYAPAAASVLTEVIKSSEEETVMGLEVQLKQATDAIL----KVAPITAFVSLKASTELFLRFVIRTSLELSDFEECKRRLIKRGEYFRGRTEASRDKIAQVGERFIQDGSVILTHGNSRVVAAVFERAA-TTKRFRVYVTESRPDGSGYSFAERLLSAGISVTIILDSCVGFIMDQVDLVLVGAEGVAENGGIINRIGSLQVALVARSYDKPVFVAVESYKFSRIYPLRQHDLP--LPGNYREPWYPLL----------------------------------SEFDLSKGIQF---ENPASDFTPPSLISLLFTDLGVLTPAAVSDELIRLYQ 322          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|971510350|dbj|GAQ87864.1| (eukaryotic translation initiation factor eIF-2B alpha subunit [Klebsormidium nitens])

HSP 1 Score: 259.996 bits (663), Expect = 3.472e-80
Identity = 150/336 (44.64%), Postives = 197/336 (58.63%), Query Frame = 0
Query:   74 NVPVPIAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKND-DVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLY 408
            ++ V +A ++ L  V+  S+A T+MG++ +LK A+ EL E E+      +SIS  A  ELF R+ TR +  +  D     +  I RG  F   ++K+R  I+++G  FV+DG  ILTHG S VV  +L  AA   K+F+V+  EGRP+G G + A  LT  GIPVT+ILD+  AY MERVD+VL GAEGVVESGGI+N +GT Q+A+VA+ +NKP+YVAAESYKFARLYPL Q DL          P  P  +T  E                                   P    M   NPS DYTP   ++LLFTDLG+LTP+AVSDELI+LY
Sbjct:   66 DLAVAVAAIKALTAVIKRSKATTMMGLEIELKRASEELKEREK------SSISLAAGCELFLRFVTRTSALEHEDINAGKERLIERGEQFSEISIKARQTISKVGADFVRDGCTILTHGVSRVVVSLLKLAASQGKHFSVICPEGRPDGKGIQTARELTAVGIPVTLILDTGVAYVMERVDMVLCGAEGVVESGGIINNLGTYQIAVVARAFNKPVYVAAESYKFARLYPLDQRDL----------PYDPKPVTFAE-----------------------------------PLPPNMKVDNPSRDYTPPSCLTLLFTDLGVLTPSAVSDELIQLY 350          
BLAST of EWM25308.1 vs. NCBI_GenBank
Match: gi|260820728|ref|XP_002605686.1| (hypothetical protein BRAFLDRAFT_114409 [Branchiostoma floridae] >gi|229291021|gb|EEN61696.1| hypothetical protein BRAFLDRAFT_114409 [Branchiostoma floridae])

HSP 1 Score: 258.07 bits (658), Expect = 4.072e-80
Identity = 148/330 (44.85%), Postives = 190/330 (57.58%), Query Frame = 0
Query:   79 IAGVQTLLHVMSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNLLGKNTIFDSGPGVAAMTTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLY 408
            +A +  L+  +  + A T+  ++++LK A   L + +  I+      S  +  ELF R+ T    D PDF+   ++ + RG  F+     SR  IA+LGH FV DG  IL H  S VV  VL +AA +NK FTV VTE +P+ SG K   +L EAGIP TVILD+A AY ME+VD+V++GAEGVVESGGI+NKIGT Q+A+ AK  NKPLYV AES+KF RLYPL Q DL D+                               ++R    SS   LGK               ++PS DYTP   I+LLFTDLGILTP+AVSDELIKLY
Sbjct:   24 VAAIHVLMLFLKQNTAGTLAELRDNLKEAIKTLTKSDTSIT------SVSSGCELFLRFITLTALDHPDFQVYKQVLLDRGELFLKKISNSRQKIAKLGHPFVTDGATILVHSDSRVVLEVLKKAASANKRFTVYVTESQPDRSGLKMHNKLVEAGIPSTVILDAAMAYIMEKVDLVMVGAEGVVESGGIINKIGTYQMALCAKNANKPLYVVAESFKFVRLYPLNQQDLPDDF------------------------------KYRYSTLSSNTDLGK---------------EHPSVDYTPPSLITLLFTDLGILTPSAVSDELIKLY 302          
The following BLAST results are available for this feature:
BLAST of EWM25308.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107063|gb|EWM25308.1|0.000e+0100.00translation initiation factor eif-2b subunit alpha... [more]
gi|1173940398|gb|OQR89827.1|1.226e-8746.45translation initiation factor eIF-2B subunit alpha... [more]
gi|669137162|ref|XP_008604149.1|1.055e-8645.71hypothetical protein SDRG_00450 [Saprolegnia dicli... [more]
gi|1173943027|gb|OQR91934.1|5.381e-8546.43translation initiation factor eIF-2B subunit alpha... [more]
gi|698797218|ref|XP_009831638.1|5.441e-8344.57hypothetical protein H257_07709 [Aphanomyces astac... [more]
gi|831766495|ref|XP_012751808.1|3.017e-8243.11hypothetical protein SAMD00019534_084630, partial ... [more]
gi|953496497|emb|CEG42097.1|1.860e-8144.44protein [Plasmopara halstedii][more]
gi|545711074|ref|XP_005707844.1|5.188e-8141.18translation initiation factor eIF-2B alpha subunit... [more]
gi|971510350|dbj|GAQ87864.1|3.472e-8044.64eukaryotic translation initiation factor eIF-2B al... [more]
gi|260820728|ref|XP_002605686.1|4.072e-8044.85hypothetical protein BRAFLDRAFT_114409 [Branchiost... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5372rna5372Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications