EWM25339.1, cds5341 (CDS) Nannochloropsis gaditana

Overview
NameEWM25339.1
Unique Namecds5341
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:785744..785948 -
Alignment locationCM002465.1:785289..785554 -
Alignment locationCM002465.1:784695..784865 -

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Properties
Property NameValue
Protein idEWM25339.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100196g12.3063.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:785744..785948 -
CM002465.1supercontigCM002465.1:785289..785554 -
CM002465.1supercontigCM002465.1:784695..784865 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25339.1 vs. NCBI_GenBank
Match: gi|585107098|gb|EWM25339.1| (hypothetical protein Naga_100196g12 [Nannochloropsis gaditana])

HSP 1 Score: 444.121 bits (1141), Expect = 6.196e-158
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 
Query:    1 MSTFLVALTRGSVACTAAGRHGLANLRKKRPLIPKVDGVMNTLPVSQNYGFHSSASVLGGGTPTKWNHVWNWKMKQRLAAMKEADEKPQQSEEKSHEKDNMFRPLPGERVIELDENLPDGVLEEYWAELRREREGSHEGTDGKQTSGRGQSKRKTIKKHFLYGWTYAPKRNKQITEEDTGANTSEIDGNAREFNNSQKPASTPAGRAALRNEG 213
            MSTFLVALTRGSVACTAAGRHGLANLRKKRPLIPKVDGVMNTLPVSQNYGFHSSASVLGGGTPTKWNHVWNWKMKQRLAAMKEADEKPQQSEEKSHEKDNMFRPLPGERVIELDENLPDGVLEEYWAELRREREGSHEGTDGKQTSGRGQSKRKTIKKHFLYGWTYAPKRNKQITEEDTGANTSEIDGNAREFNNSQKPASTPAGRAALRNEG
Sbjct:    1 MSTFLVALTRGSVACTAAGRHGLANLRKKRPLIPKVDGVMNTLPVSQNYGFHSSASVLGGGTPTKWNHVWNWKMKQRLAAMKEADEKPQQSEEKSHEKDNMFRPLPGERVIELDENLPDGVLEEYWAELRREREGSHEGTDGKQTSGRGQSKRKTIKKHFLYGWTYAPKRNKQITEEDTGANTSEIDGNAREFNNSQKPASTPAGRAALRNEG 213
[Close]
BLAST of EWM25339.1 vs. NCBI_GenBank
Match: gi|553187355|ref|XP_005854594.1| (hypothetical protein NGA_0176300 [Nannochloropsis gaditana CCMP526] >gi|422294475|gb|EKU21775.1| hypothetical protein NGA_0176300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 438.343 bits (1126), Expect = 1.242e-155
Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0 
Query:    1 MSTFLVALTRGSVACTAAGRHGLANLRKKRPLIPKVDGVMNTLPVSQNYGFHSSASVLGGGTPTKWNHVWNWKMKQRLAAMKEADEKPQQSEEKSHEKDNMFRPLPGERVIELDENLPDGVLEEYWAELRREREGSHEGTDGKQTSGRGQSKRKTIKKHFLYGWTYAPKRNKQITEEDTGANTSEIDGNAREFNNSQKPASTPAGRAALRNEG 213
            MSTFLVALTRGSVACTAAGRHGLANLRKKRPLIPKVDGVMNTLPVSQNYGFHSSASVLGGGTPTKWNHVWNWKMKQRLAAMKEADEKPQQSEEKSHEKDNMFRPLPGERVIELDENLPDGVLEEYWAELRREREGSHEGTDGKQTSGRGQSKRKTIKKHFLYGWTYAPKRNKQITEE TGANTSEIDGNAREFNNSQKPASTPAGRAAL NEG
Sbjct:    1 MSTFLVALTRGSVACTAAGRHGLANLRKKRPLIPKVDGVMNTLPVSQNYGFHSSASVLGGGTPTKWNHVWNWKMKQRLAAMKEADEKPQQSEEKSHEKDNMFRPLPGERVIELDENLPDGVLEEYWAELRREREGSHEGTDGKQTSGRGQSKRKTIKKHFLYGWTYAPKRNKQITEEGTGANTSEIDGNAREFNNSQKPASTPAGRAALTNEG 213
The following BLAST results are available for this feature:
BLAST of EWM25339.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107098|gb|EWM25339.1|6.196e-158100.00hypothetical protein Naga_100196g12 [Nannochlorops... [more]
gi|553187355|ref|XP_005854594.1|1.242e-15599.06hypothetical protein NGA_0176300 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5354rna5354Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications