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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100196g12.3063.mrna |
| Orig protein id | gnl|cribi|Naga_100196g12.3063 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:784695..785948 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5354 ID=rna5354|Name=rna5354|organism=Nannochloropsis gaditana|type=mRNA|length=891bp
ATGGGGGAGTCTTGCCTTTGCTGTGCTTGTGTCAGCACGGGCGAAGTAGG
TGTGGTTGAGCGGAACTGCAAGTACAATCGGTTGGGGCTACCGGGTATCA
CCCTCATGTGTTGGCCGTTCGAGGCCATGCAATCTCGAGTATCCTTGCGC
ATCATGCAGCTAGACATCCGGGCGGAGACTAAAACCAAAGACAATGTCTT
TGTGATGGTGTATATCTCCATCCAGTATCAGGTCATTCGCGAGAAGGTCT
TCGACGCTGTCTACCGCCTCACGAACCCGCAGGAACAAATTCGCGCCTAC
GTCTACGACGTGGTCCGGGCAACCCTGCCCCGCATGTTCCTCGACGAAGC
CTTCGAGGCCAAAGACGACATTGCGCACGCCGTCAAGGCCTCCCTGCAAA
CGTGCATGGGCACCTATGGGTACTCGATACTGAACGCCCTTGTGACGGAT
CTAGAACCCGATTTGCGCGTCAAGGCTGCCATGAACGAGATCAACGCCTC
GAAACGCCTGAAGGAAGCTGCCAGGGAGCGGGCGGAAGGGGAGAAGATCG
TCCAAGTCAAGATCGCGGAGGCCAACGCCGAGAGCAAATACCTGTCAGGA
GTGGGGGTGGCGAAGCAGCGTAAGGCGATTGTGGATGGGTTGCGCGAGAG
CATCCTGGGATTCAGCGGCAACGTGCCGGGGACGACGGCGAAGGACGTCA
TGGACCTGATGCTTCTCACGCAGTACTTCGACATGCTGAACCTGGTGGGT
AACAATCCCTCCACCAACACTGTCTTCATCCCGCACAAACCTGCCCTAGC
GCAGAATGGAGAAGAGGAAGTAGGGGACCAGGTCAGAAATGGGATGTTAC
AGGCGCAAAGCAGGTTTGCGCACGCGAGGATGGGGCGGTGA back to topprotein sequence of rna5354 >rna5354-protein ID=rna5354-protein|Name=rna5354|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MSTFLVALTRGSVACTAAGRHGLANLRKKRPLIPKVDGVMNTLPVSQNYG
FHSSASVLGGGTPTKWNHVWNWKMKQRLAAMKEADEKPQQSEEKSHEKDN
MFRPLPGERVIELDENLPDGVLEEYWAELRREREGSHEGTDGKQTSGRGQ
SKRKTIKKHFLYGWTYAPKRNKQITEEDTGANTSEIDGNAREFNNSQKPA
STPAGRAALRNEG back to topmRNA from alignment at CM002465.1:784695..785948- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5354 ID=rna5354|Name=rna5354|organism=Nannochloropsis gaditana|type=mRNA|length=1254bp|location=Sequence derived from alignment at CM002465.1:784695..785948- (Nannochloropsis gaditana)
ATGAGCACTTTCCTTGTCGCTTTGACTCGCGGCTCGGTGGCGTGCACCGC
TGCCGGAAGACATGGCCTCGCAAATCTTCGCAAAAAGCGTCCTTTAATAC
CAAAAGTAGATGGAGTCATGAACACTCTGCCTGTATCTCAAAATTATGGC
TTTCATAGCTCGGCGTCGGTTTTAGGGGGTGGAACGCCAACGAAATGGAA
CCATGGTGAGTCATCCAATACGAGTTTAGAAAATGAGGCATATTTTGGGG
GTCCATCCAGTAAAGTATTGTACAACGAGCTGGCAGATAGAACATCTGCA
ACAGTAGATGCGTGTTCAACGGAAGAAGAGTACTTTGCATGTTTATCCAC
ACTTAGGCGTCGACAATATGCGATTTACAACCCTCTTCATACAGTGTGGA
ATTGGAAAATGAAGCAACGTCTGGCAGCCATGAAAGAAGCGGACGAAAAG
CCTCAGCAAAGTGAGGAAAAAAGTCACGAGAAGGACAACATGTTTCGACC
CCTGCCGGGAGAACGGGTGATTGAGTTGGACGAGAATCTTCCGGATGGTG
TTTTGGAGGAGTACTGGGCTGAGCTTCGGAGAGAGCGAGAGGGGTCCCAT
GAAGGAACTGATGGCAAACAGACCTCTGGCCGGGGGCAGTCCAAGCGGAA
AACGATCAAGGTGAGCAAACGAAGGAAAGTTGAAGATGTAGTCGAGTCGC
TCAGTGTGGAAAGGGGTGGTTTCCGCGTGATAGGCTCGTCTGTCGTCTAG
TATAGTCTCAAGTCCACAGTTCGTAGCTGGTCCCTTGGGCAGGACAGCAA
GCATCTAGCTTTGCCTCTCCACGGACATAGGGTGAAAAAAAAATGGACTA
CGGAGGTCGTGATTGTGTGAAGAAGTGTCGCTATTTTTGAAAGCGTGTTT
TCTAATGAAAGACAGGGCCTTATGATCATTTCGGTTTCGTGTAGGTATAC
TCAACAGACTAGAGTGGAACAGGTAGCTTTGATAACCAACGTGATCAGAA
GTGATTCGGCACACTTTATCACTACTTACATCCTTTCACACTTCGACATA
TATATATATATATATCTATATATACATGTACAGAAGCACTTCCTTTATGG
TTGGACTTATGCCCCCAAAAGAAATAAACAAATTACGGAAGAAGATACAG
GGGCAAACACATCAGAGATAGACGGGAATGCTCGCGAATTCAACAACTCG
CAAAAGCCGGCATCAACACCTGCTGGAAGAGCTGCTCTTAGGAATGAGGG
CTGA back to topCoding sequence (CDS) from alignment at CM002465.1:784695..785948- >rna5354 ID=rna5354|Name=rna5354|organism=Nannochloropsis gaditana|type=CDS|length=1926bp|location=Sequence derived from alignment at CM002465.1:784695..785948- (Nannochloropsis gaditana)
AAGCACTTCCTTTATGGTTGGACTTATGCCCCCAAAAGAAATAAACAAAT
TACGGAAGAAGATACAGGGGCAAACACATCAGAGATAGACGGGAATGCTC
GCGAATTCAACAACTCGCAAAAGCCGGCATCAACACCTGCTGGAAGAGCT
GCTCTTAGGAATGAGGGCTGATGTGGAATTGGAAAATGAAGCAACGTCTG
GCAGCCATGAAAGAAGCGGACGAAAAGCCTCAGCAAAGTGAGGAAAAAAG
TCACGAGAAGGACAACATGTTTCGACCCCTGCCGGGAGAACGGGTGATTG
AGTTGGACGAGAATCTTCCGGATGGTGTTTTGGAGGAGTACTGGGCTGAG
CTTCGGAGAGAGCGAGAGGGGTCCCATGAAGGAACTGATGGCAAACAGAC
CTCTGGCCGGGGGCAGTCCAAGCGGAAAACGATCAAGATGAGCACTTTCC
TTGTCGCTTTGACTCGCGGCTCGGTGGCGTGCACCGCTGCCGGAAGACAT
GGCCTCGCAAATCTTCGCAAAAAGCGTCCTTTAATACCAAAAGTAGATGG
AGTCATGAACACTCTGCCTGTATCTCAAAATTATGGCTTTCATAGCTCGG
CGTCGGTTTTAGGGGGTGGAACGCCAACGAAATGGAACCATGAAGCACTT
CCTTTATGGTTGGACTTATGCCCCCAAAAGAAATAAACAAATTACGGAAG
AAGATACAGGGGCAAACACATCAGAGATAGACGGGAATGCTCGCGAATTC
AACAACTCGCAAAAGCCGGCATCAACACCTGCTGGAAGAGCTGCTCTTAG
GAATGAGGGCTGATGTGGAATTGGAAAATGAAGCAACGTCTGGCAGCCAT
GAAAGAAGCGGACGAAAAGCCTCAGCAAAGTGAGGAAAAAAGTCACGAGA
AGGACAACATGTTTCGACCCCTGCCGGGAGAACGGGTGATTGAGTTGGAC
GAGAATCTTCCGGATGGTGTTTTGGAGGAGTACTGGGCTGAGCTTCGGAG
AGAGCGAGAGGGGTCCCATGAAGGAACTGATGGCAAACAGACCTCTGGCC
GGGGGCAGTCCAAGCGGAAAACGATCAAGATGAGCACTTTCCTTGTCGCT
TTGACTCGCGGCTCGGTGGCGTGCACCGCTGCCGGAAGACATGGCCTCGC
AAATCTTCGCAAAAAGCGTCCTTTAATACCAAAAGTAGATGGAGTCATGA
ACACTCTGCCTGTATCTCAAAATTATGGCTTTCATAGCTCGGCGTCGGTT
TTAGGGGGTGGAACGCCAACGAAATGGAACCATGAAGCACTTCCTTTATG
GTTGGACTTATGCCCCCAAAAGAAATAAACAAATTACGGAAGAAGATACA
GGGGCAAACACATCAGAGATAGACGGGAATGCTCGCGAATTCAACAACTC
GCAAAAGCCGGCATCAACACCTGCTGGAAGAGCTGCTCTTAGGAATGAGG
GCTGATGTGGAATTGGAAAATGAAGCAACGTCTGGCAGCCATGAAAGAAG
CGGACGAAAAGCCTCAGCAAAGTGAGGAAAAAAGTCACGAGAAGGACAAC
ATGTTTCGACCCCTGCCGGGAGAACGGGTGATTGAGTTGGACGAGAATCT
TCCGGATGGTGTTTTGGAGGAGTACTGGGCTGAGCTTCGGAGAGAGCGAG
AGGGGTCCCATGAAGGAACTGATGGCAAACAGACCTCTGGCCGGGGGCAG
TCCAAGCGGAAAACGATCAAGATGAGCACTTTCCTTGTCGCTTTGACTCG
CGGCTCGGTGGCGTGCACCGCTGCCGGAAGACATGGCCTCGCAAATCTTC
GCAAAAAGCGTCCTTTAATACCAAAAGTAGATGGAGTCATGAACACTCTG
CCTGTATCTCAAAATTATGGCTTTCATAGCTCGGCGTCGGTTTTAGGGGG
TGGAACGCCAACGAAATGGAACCATG back to top
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