EWM25380.1, cds5308 (CDS) Nannochloropsis gaditana

Overview
NameEWM25380.1
Unique Namecds5308
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:708794..710059 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25380.1
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type
Orig transcript idgnl|cribi|Naga_100005g118.6674.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:708794..710059 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR024936Cyclophilin-type_PPIase
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom
Homology
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|585107141|gb|EWM25380.1| (peptidyl-prolyl cis-trans isomerase cyclophilin type [Nannochloropsis gaditana])

HSP 1 Score: 848.966 bits (2192), Expect = 0.000e+0
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0
Query:    1 MRRTSWNGVTTIWVFLVAGTGAQAFFTVSSTRPHSLLSRAACDLNQNKDSLKQASFPSLQSLPGLGLLALNVLAPSLIPPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKAAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITADAVKSPKRTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQGK 421
            MRRTSWNGVTTIWVFLVAGTGAQAFFTVSSTRPHSLLSRAACDLNQNKDSLKQASFPSLQSLPGLGLLALNVLAPSLIPPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKAAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITADAVKSPKRTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQGK
Sbjct:    1 MRRTSWNGVTTIWVFLVAGTGAQAFFTVSSTRPHSLLSRAACDLNQNKDSLKQASFPSLQSLPGLGLLALNVLAPSLIPPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKAAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITADAVKSPKRTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQGK 421          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|564738964|gb|AHB89362.1| (peptidyl-prolyl cis-trans isomerase M23 [Thermosynechococcus sp. NK55a])

HSP 1 Score: 224.172 bits (570), Expect = 5.754e-66
Identity = 139/353 (39.38%), Postives = 193/353 (54.67%), Query Frame = 0
Query:   79 PPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEK--AAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD------AVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQ 419
            PP   ALPQ    T+ + LL  ALP  NP + ++   L +++    G             K W ++      A   I  R  EL++    EK  AA+ +L +L   +D L  AA A++R   + A+  AL ++ +L  + V    + PP   Y  +P+LLGRA +E+ T  GK      +  ++DG+SAPL+AG FVDL QR  +D       +ES V    D          PK    R +PLEILVEGDK P YG TLE+ GR+ +  VLPF+AYGT+A+  P DDPNGG++ FFFL  +P  TPAGLN LDG ++V GYVV+GE+ L  L  GD + + +V+ G E L Q
Sbjct:   35 PPLIAALPQGNAITDPKALLRWALPIDNPTVRELQKDLEQISFWVRG-------------KQWSKIASNISKAKTIIRDRADELLQRIPAEKQEAAKTLLAELETSLDTLQEAAKAKDRSQLLPAKAAALDKVGELEAMMVQNFSYTPPK-GYEHLPRLLGRATVEMETSKGK------LTIVVDGYSAPLTAGNFVDLVQRHFYDGLPFTRAEESYVLQAGDPPGPEVGFIDPKTNQYRAIPLEILVEGDKYPLYGITLEDAGRYLDHPVLPFSAYGTVALARPNDDPNGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLEHLVQ 367          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|752789418|ref|WP_041429273.1| (peptidylprolyl isomerase [Thermosynechococcus sp. NK55a])

HSP 1 Score: 224.172 bits (570), Expect = 1.088e-65
Identity = 139/353 (39.38%), Postives = 193/353 (54.67%), Query Frame = 0
Query:   79 PPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEK--AAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD------AVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQ 419
            PP   ALPQ    T+ + LL  ALP  NP + ++   L +++    G             K W ++      A   I  R  EL++    EK  AA+ +L +L   +D L  AA A++R   + A+  AL ++ +L  + V    + PP   Y  +P+LLGRA +E+ T  GK      +  ++DG+SAPL+AG FVDL QR  +D       +ES V    D          PK    R +PLEILVEGDK P YG TLE+ GR+ +  VLPF+AYGT+A+  P DDPNGG++ FFFL  +P  TPAGLN LDG ++V GYVV+GE+ L  L  GD + + +V+ G E L Q
Sbjct:   58 PPLIAALPQGNAITDPKALLRWALPIDNPTVRELQKDLEQISFWVRG-------------KQWSKIASNISKAKTIIRDRADELLQRIPAEKQEAAKTLLAELETSLDTLQEAAKAKDRSQLLPAKAAALDKVGELEAMMVQNFSYTPPK-GYEHLPRLLGRATVEMETSKGK------LTIVVDGYSAPLTAGNFVDLVQRHFYDGLPFTRAEESYVLQAGDPPGPEVGFIDPKTNQYRAIPLEILVEGDKYPLYGITLEDAGRYLDHPVLPFSAYGTVALARPNDDPNGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLEHLVQ 390          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|499369086|ref|WP_011056664.1| (peptidyl-prolyl cis-trans isomerase [Thermosynechococcus elongatus] >gi|22298363|ref|NP_681610.1| peptidyl-prolyl cis-trans isomerase [Thermosynechococcus elongatus BP-1] >gi|22294542|dbj|BAC08372.1| peptidyl-prolyl cis-trans isomerase [Thermosynechococcus elongatus BP-1])

HSP 1 Score: 224.172 bits (570), Expect = 1.148e-65
Identity = 143/368 (38.86%), Postives = 199/368 (54.08%), Query Frame = 0
Query:   64 GLGLLALNVLAPSLIPPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEK--AAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD------AVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQ 419
            G  LL    +A  + PP   ALPQ    T+ + LL  ALP  NP + ++   L +++    G             K W ++      A   I  R  +L++    EK  AA+ +L +L   +D L  AA A++R   + A+  AL ++ +L  + V    + PP   Y  +P+LLGRA +E+ T  GK      +  ++DG+SAPL+AG FVDL QR  +D       +ES V    D          PK    R +PLEILVEGDK P YG TLE+ GR+ E  VLPF+AYGT+A+  P DDPNGG++ FFFL  +P  TPAGLN LDG ++V GYVV+GE+ L  L  GD + + +V+ G E L Q
Sbjct:   43 GTFLLPPLAIALPVAPPLIAALPQGNAITDPKALLRWALPIDNPTVRELQKDLEQISFWVRG-------------KQWSKIVSNISKAKTIIRDRTADLLQSIPAEKQEAAKTLLAELETSLDTLQEAAKAKDRSQLLPAKAAALDKVGELEAMMVQNFSYTPPK-GYEHLPRLLGRATVEMETTKGK------LTIVVDGYSAPLTAGNFVDLVQRHFYDGLPFTRAEESYVLQAGDPPGPEVGFIDPKTNQYRAIPLEILVEGDKYPLYGITLEDAGRYLEHPVLPFSAYGTVALARPNDDPNGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLENLVQ 390          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|504937489|ref|WP_015124591.1| (peptidyl-prolyl cis-trans isomerase [Synechococcus sp. PCC 6312] >gi|427377096|gb|AFY61048.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Synechococcus sp. PCC 6312])

HSP 1 Score: 214.157 bits (544), Expect = 4.318e-62
Identity = 133/346 (38.44%), Postives = 193/346 (55.78%), Query Frame = 0
Query:   84 ALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKAAQA--VLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD------AVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELL 417
            ALPQ    T+A+ +L +ALP  NP + ++  +L  ++ +    +R+         K W  V    + A   +  +  +L+     +   QA   L  LN  +D L  AA+A++R+  +  + QAL ++ +L  L V   PFQ P  EY ++PQLLGRA +++TT  G       +  +LDG+SAP++AG FVDL +R  ++Q      +ES V    D          PK    R +PLEIL +GD  P YG TLE+ GR+ E  VLPF+AYGTLA+  P +D NGG++ FFFL  +P  TPAGLN LDG ++V GY V G+D L  L  GD++E   V++G E L
Sbjct:   48 ALPQGNAVTDAKAILRNALPIDNPTVRELQGNLEDISNQ----LRA---------KRWSGVGGDIKKAKRLLETKTDKLLASIPTDSQPQAKDHLEQLNQTLDALQTAAEAKDRQQLLPLKAQALDQVGRLEDLMVKGFPFQIPA-EYRNLPQLLGRATVKLTTSKG------DITVVLDGYSAPVTAGNFVDLVKRGFYNQLPFTRAEESYVLQAGDPPGPEDGFIDPKTKEYRAIPLEILTDGDNTPLYGITLEDAGRYLEHPVLPFSAYGTLALARPNEDANGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYTVDGQDVLGKLRPGDMIEKAEVIAGGENL 373          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|515382239|ref|WP_016876189.1| (peptidyl-prolyl cis-trans isomerase [Chlorogloeopsis fritschii])

HSP 1 Score: 212.231 bits (539), Expect = 2.028e-61
Identity = 131/351 (37.32%), Postives = 195/351 (55.56%), Query Frame = 0
Query:   79 PPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKA--AQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD------AVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELL 417
            P S+  LP     T+ + LL  ALP  N  + ++ +SL  ++ +   N R            W  V K    AS  I     +++    DE+   A+A++++L   +++L   A A+++E     +   L  + +L  L V   PF+ P  +Y ++PQL GRA +E+ T  G       +  ++DG+SAP++AG FVDL QR  ++  +   ++ES V  T D          PK    R +PLE LVEGDKEPTYG TLEE GR+ +  VLPF+AYGT+AM  P  DPNGG++ FFF   +P  TPAG N LDG +S+ GYV++G++ L +L AGD +E+ +V+ G E L
Sbjct:   32 PSSSAGLPAGNAITDGKALLRYALPIDNQPVRELQASLEDISNQLRANRR------------WGAVSKDVGKAS-RILNNPSQVLASVPDERKPKAEALISELKSGVNELQELAQAKDKEKVKEKRADLLNLVGELEELMVEGFPFEVPE-QYSNLPQLKGRATVEVKTNKG------TVTLVVDGYSAPVTAGNFVDLVQRGFYNGLEFTRSEESYVLQTGDPPGKEVGFIDPKTGKYRAIPLEYLVEGDKEPTYGITLEEAGRYTDLPVLPFSAYGTVAMARPESDPNGGSSQFFFFLYEPELTPAGRNLLDGRYSIFGYVIEGQEVLRELKAGDKIESAKVVKGLENL 362          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|1160831699|ref|WP_079677497.1| (peptidylprolyl isomerase [Planktothrix sp. PCC 11201] >gi|1152219154|emb|SKB11275.1| putative Peptidylprolyl isomerase [Planktothrix sp. PCC 11201])

HSP 1 Score: 210.305 bits (534), Expect = 1.534e-60
Identity = 130/353 (36.83%), Postives = 189/353 (53.54%), Query Frame = 0
Query:   79 PPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKA--AQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD------AVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQ 419
            P     LPQ    T+ Q LL  ALP  N     + SSL  + ++  G             K W  +     +AS  +A +  EL+    +E+   AQ ++  +   ID L AA + ++ +  +  Q + L  +  L  L V   PF+ P  EY ++PQL GRA IEI T  G       +  ++DG+SAP++AG FVDL QR  +D  K + ++ES      D          PK    R +PLEIL +GD+EP Y  T EE GR+++  VLPF+A+GTLA+  P   P+GG++  FF   +P  TPAGLN LDG ++V GYV QG++ L++L  GDV+E+ +V+ G+E L Q
Sbjct:   43 PKRESILPQGNAITDGQALLRYALPIDNEAARKIQSSLEGIKSQLRG-------------KRWSNINGNITTASRVLATKEAELLANIPEERQPQAQVLVEQIKQDIDSLRAAVELKDTQTLLLTQGKILDNIGTLEELMVKEFPFEVPA-EYSNLPQLKGRATIEIQTNKG------DLTVVVDGYSAPVTAGNFVDLVQRGFYDGLKFIRSEESYALQVGDPEGADDGFIDPKTGKYRGIPLEILAQGDQEPIYNTTFEEIGRYQDHPVLPFSAFGTLALARPEAIPDGGSSQVFFFLFEPELTPAGLNLLDGRYAVFGYVTQGKEVLEELRKGDVIESAKVIRGAENLVQ 375          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|1178040876|ref|WP_082906374.1| (peptidylprolyl isomerase [Phormidesmis priestleyi])

HSP 1 Score: 209.149 bits (531), Expect = 3.226e-60
Identity = 136/363 (37.47%), Postives = 199/363 (54.82%), Query Frame = 0
Query:   72 VLAPSLIPPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKA--AQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD-----------AVKSPKRTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQGK 421
            ++  SL    AQALP   P  N + LL  +LP  NP +  + SSL  +TT+   N R            W  V    + A   ++ R  +L+    D+K   A+A +  L   ++QL  +A+A+++E   + +   L  + +L  L V   P++ P  EY ++PQL GRA +   T  G       +  +LDGFSAP++AG F DL QR  +D  +    ++S V    D           A K   R+VPLEILV+GDKEP YG TLE+ GR+ ++ VLPF+AYG LAM  P +DPNGG++ FFF   +P  TPAGLN LDG +++ G+V  G D L+ L AGD +E+++V+ G + L + K
Sbjct:   27 IVCLSLWSLPAQALPPGNPIVNPEALLRYSLPIDNPDVRKLQSSLEDITTQLRANRR------------WGAVVSDVKQAYRILSDRPTQLLASIPDDKKPQAEAFIEKLKTGVEQLQISAEAKDKEQTRSQRADLLTLVSRLEELMVQKFPYEVPE-EYSNLPQLKGRATVTAKTNQG------DLTIVLDGFSAPVTAGNFADLVQRGFYDGLQFTRAEDSYVLQIGDPPGADVGFVDPATKK-YRSVPLEILVKGDKEPLYGITLEDAGRYLDQPVLPFSAYGALAMARPGEDPNGGSSQFFFFLFEPELTPAGLNLLDGRYAIFGFVTSGRDVLEKLKAGDTIESMKVIDGLDNLVEPK 369          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|493036139|ref|WP_006103902.1| (peptidyl-prolyl cis-trans isomerase [Coleofasciculus chthonoplastes] >gi|196177769|gb|EDX72772.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type domain protein [Coleofasciculus chthonoplastes PCC 7420])

HSP 1 Score: 209.534 bits (532), Expect = 4.065e-60
Identity = 126/351 (35.90%), Postives = 197/351 (56.13%), Query Frame = 0
Query:   79 PPSAQA-LPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKA--AQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTI-----TADAVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELL 417
            PP+ ++ L Q    T+ + LL  ALP +N  + ++ +SL  + T+  G             K W  + +    A   ++ R ++++    +E+   A+A++T +   I  L  A +A+++EA    + + L ++ +L  + V   PF+ P+ EY ++PQL GRA IEI T  G       M  ++DG+SAP++AG FVDL QR  +D+  I  T++  V         +    PK    R +P E+LV GD+EP YG TLE+ G + +  VLPF+AYG +AM  P DDPNGG++ FFF K D   TP G N +DG ++V GYVV+G+D LD L  GD++E+  V+ G++ L
Sbjct:   45 PPARESRLAQGNAITDGKALLRYALPIENQAVRNVQASLEDIATQLRG-------------KRWSPINRDITKADVILSNRPEKVLADIPEEQKPQAEAIITTMKDDIVSLREAVEAKDKEAVWIERGKILDKVGELERMMVKGFPFEVPS-EYSNLPQLKGRATIEIATNKG------DMTLVVDGYSAPVTAGNFVDLVQRGFYDELAITRTEDFYVQTGDPPGPEEGFIDPKTGEYRAIPFEVLVRGDEEPIYGMTLEQAGIYLDEPVLPFSAYGAVAMARPGDDPNGGSSQFFFFKFDSELTPPGFNVMDGRYAVFGYVVEGKDVLDKLELGDIIESATVVQGADNL 375          
BLAST of EWM25380.1 vs. NCBI_GenBank
Match: gi|501727307|ref|WP_012626750.1| (peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 7425] >gi|219863317|gb|ACL43656.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Cyanothece sp. PCC 7425])

HSP 1 Score: 209.149 bits (531), Expect = 6.664e-60
Identity = 127/350 (36.29%), Postives = 189/350 (54.00%), Query Frame = 0
Query:   78 IPPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGA--TDEKAAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITAD------AVKSPK----RTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSE 415
            +P    +LP     T+ + LL  +LP +N  +  + + +  +  +  G             K W  +       +  +  R  +L+      ++  AQ +L  L  ++++L A A+++NRE  +  +   L  +  L  L V   PF  P  EY S+PQLLGRA I + T  G      ++  ++DG+SAPL+AG FVDL QR  +D  K    +ES V    D          PK    R +PLEIL++GDK+P YG TLE+ GR+ ++ VLPF+AYGTLA+  P DDPNGG++ FFFL  +P  TPAG N LDG ++V GYVV+G + L +L  GD + + RV +G+E
Sbjct:   51 LPTGLASLPTGNAITDPKALLRLSLPIQNSAVRRLQADIEDIANQLRG-------------KRWATINSEIAKGATIVRDRSADLLASIPPQNQPQAQVILNQLQAQLNELQAVAESKNREQVLQKRSLVLDLVGDLEALMVQGFPFNVPP-EYSSLPQLLGRATIALQTNKG------ELTLVVDGYSAPLTAGNFVDLVQRGFYDGLKFTRAEESYVLQAGDPPGKEEGFVDPKTGQYRAIPLEILIQGDKKPLYGMTLEDAGRYLDQPVLPFSAYGTLALARPSDDPNGGSSQFFFLLFEPELTPAGSNLLDGRYAVFGYVVEGAEVLRELRQGDQIISARVTAGAE 380          
The following BLAST results are available for this feature:
BLAST of EWM25380.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107141|gb|EWM25380.1|0.000e+0100.00peptidyl-prolyl cis-trans isomerase cyclophilin ty... [more]
gi|564738964|gb|AHB89362.1|5.754e-6639.38peptidyl-prolyl cis-trans isomerase M23 [Thermosyn... [more]
gi|752789418|ref|WP_041429273.1|1.088e-6539.38peptidylprolyl isomerase [Thermosynechococcus sp. ... [more]
gi|499369086|ref|WP_011056664.1|1.148e-6538.86peptidyl-prolyl cis-trans isomerase [Thermosynecho... [more]
gi|504937489|ref|WP_015124591.1|4.318e-6238.44peptidyl-prolyl cis-trans isomerase [Synechococcus... [more]
gi|515382239|ref|WP_016876189.1|2.028e-6137.32peptidyl-prolyl cis-trans isomerase [Chlorogloeops... [more]
gi|1160831699|ref|WP_079677497.1|1.534e-6036.83peptidylprolyl isomerase [Planktothrix sp. PCC 112... [more]
gi|1178040876|ref|WP_082906374.1|3.226e-6037.47peptidylprolyl isomerase [Phormidesmis priestleyi][more]
gi|493036139|ref|WP_006103902.1|4.065e-6035.90peptidyl-prolyl cis-trans isomerase [Coleofascicul... [more]
gi|501727307|ref|WP_012626750.1|6.664e-6036.29peptidyl-prolyl cis-trans isomerase [Cyanothece sp... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5321rna5321Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications