EWM25424.1, cds5283 (CDS) Nannochloropsis gaditana

Overview
NameEWM25424.1
Unique Namecds5283
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:648437..649744 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25424.1
Productring zinc finger-containing protein
Orig transcript idgnl|cribi|Naga_100005g89.6718.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:648437..649744 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR006845Pex_N
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR001841Znf_RING
Homology
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|585107185|gb|EWM25424.1| (ring zinc finger-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 891.338 bits (2302), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query:    1 MRTGVVMVDTPTTTRTSSLPSSPPSSSQQTSPALLPPSPPPSAHRPENTIVIPADPLQTPVALYSEHHPGASVESARGKPGGGWGLDTASSGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDMECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRWVPGH 435
            MRTGVVMVDTPTTTRTSSLPSSPPSSSQQTSPALLPPSPPPSAHRPENTIVIPADPLQTPVALYSEHHPGASVESARGKPGGGWGLDTASSGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDMECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRWVPGH
Sbjct:    1 MRTGVVMVDTPTTTRTSSLPSSPPSSSQQTSPALLPPSPPPSAHRPENTIVIPADPLQTPVALYSEHHPGASVESARGKPGGGWGLDTASSGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDMECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRWVPGH 435          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|299116340|emb|CBN76144.1| (putative RING finger protein [Ectocarpus siliculosus])

HSP 1 Score: 194.512 bits (493), Expect = 7.923e-54
Identity = 111/261 (42.53%), Postives = 146/261 (55.94%), Query Frame = 0
Query:  187 APRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSG----LIRQRRA-GAWAAGAGAGGGSEFRGAGGADGD-----------MECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRW 431
            AP  +QRL+ G L +  QWGFARLRRH LV GW  E            DA               G  +R A+  L R E+LFRLAW++N L+FL+ G Y + + RLV MR+V+  +  G  R IN+QF+NR+LLW+H+ ++A  V PL++W  +RR VSG    L R+ RA G +   +G  G    RG G                  C  CG   A+TPYVT CGH++CYYC + AC  D  ++CPRCG +FATSRRW
Sbjct:  181 APTRAQRLVHGLLSVGVQWGFARLRRHGLVHGWGGE------------DA---------------GSVRRVAWHVLGRLETLFRLAWMVNLLLFLKSGKYATPVDRLVRMRMVHDRADPGP-RPINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGSSGGSGRVSARGLGADAAPATEAAAAELVLTACAECGANPAKTPYVTGCGHVFCYYCARVACTVDPRYTCPRCGEYFATSRRW 413          

HSP 2 Score: 78.9518 bits (193), Expect = 3.028e-12
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   80 PGGGWGL--DTASSGVMKVNQVDARVLDTELLDLLQIQL---CSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRF 166
            P G +G+  + A   VM+VNQ+DA VLDTEL  LL+ QL   CS         G ++++KPE+ AL + L+FRFT++ + PTPGM +Q LR+
Sbjct:   17 PAGVYGVLAEPAELSVMRVNQLDAGVLDTELHSLLKTQLGRACSGLPA-----GTLERFKPEVDALFNLLMFRFTVWVHRPTPGMHLQGLRY 103          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|1160572115|ref|XP_020433484.1| (RING zinc finger-containing protein [Polysphondylium pallidum PN500] >gi|281207183|gb|EFA81366.1| RING zinc finger-containing protein [Polysphondylium pallidum PN500])

HSP 1 Score: 188.348 bits (477), Expect = 2.409e-51
Identity = 106/345 (30.72%), Postives = 178/345 (51.59%), Query Frame = 0
Query:   90 SSGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDME-CVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRWVP 433
            ++ +++V+Q+D+  LD E+L+LL+ Q   +F   FF P  V  ++PE+  +L  ++++ +IF    T G ++QNL + +  A   S  S   +       + Q+ L G + I G+W +AR+ R A+   W D                           R    +++R ++ L + ESL+++  L+NFL FL  G Y +L+ RL+ MRLVY   S   +R I+F++MNRQL+W  FT        +       ++ S ++ Q+R G  AA  G            AD  ++ C +C  +    PY++DC H++CYYC+KT+ + D SFSCPRC +  +  +R+ P
Sbjct:  100 TTNIVRVSQLDSTKLDEEILELLKAQFMRIFM--FFKPTFVQNFQPEINLILKSVIYKLSIFNLGTTYGNQLQNLTYRNEAAFDPSKGSDYLT----KLTLKQKWLSGIILIGGEWAWARINRLAINESWGD---------------------------RPDDDYRKRLWKLLNQLESLYKILSLVNFLAFLFDGKYVTLVNRLLCMRLVYAHPS--LSRRISFEYMNRQLVWHGFTIKGFLYRAI-------QKPSNMLSQQRNGGGAAN-GVSQQQVLSPQLLADQVLQKCPICMNDPINIPYISDCSHLFCYYCIKTSMMIDSSFSCPRCNSLISNIKRFQP 401          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|330797837|ref|XP_003286964.1| (hypothetical protein DICPUDRAFT_150983 [Dictyostelium purpureum] >gi|325083056|gb|EGC36519.1| hypothetical protein DICPUDRAFT_150983 [Dictyostelium purpureum])

HSP 1 Score: 186.037 bits (471), Expect = 1.476e-50
Identity = 102/351 (29.06%), Postives = 185/351 (52.71%), Query Frame = 0
Query:   90 SSGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDM---------ECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRW 431
            S+ +++V+Q+D+  LD E+LDLL+ Q   +F+  FF P  + +++PE+ A+L  ++F+ +IF    T G ++QNL F +  A   +  S   +       + Q+ L G + I G+W + RL R+++  GW++                           R    +++R +  +   ES ++   ++NFL FL  G Y +L+ R++ MRLVY   +   +RNI+F++MNR L+W  FT+  L ++PL++ D ++  +  ++ +   G+  + + A   S           +         +C +C  +    PY +DCGH++CYYC+KT+C+ D SF+CPRC T  +  +R+
Sbjct:  111 STTIVRVSQLDSARLDEEILDLLRSQFMKIFS--FFKPNFIQRFQPEINAILKSIIFKLSIFNLGTTYGNQLQNLTFRNEKAFDPNRGSDQLT----KLTLRQKWLSGLINIGGEWLWTRLNRYSIKEGWSE---------------------------RPSTDFRKRLWNLMNFLESSYKALSILNFLAFLYDGKYVTLVNRVLHMRLVYAHPT--LSRNISFEYMNRLLVWHGFTEFILFIMPLINIDRIKSFLYRVLIKNSFGSNTSSSSASSSSSSLQQLQKQQLLIQQQQMVLSKCPICMNDPISIPYTSDCGHLFCYYCIKTSCMIDSSFTCPRCNTLISNIKRF 426          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|1183370219|gb|ORX96129.1| (hypothetical protein K493DRAFT_314644 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 178.718 bits (452), Expect = 6.532e-48
Identity = 125/360 (34.72%), Postives = 186/360 (51.67%), Query Frame = 0
Query:   85 GLDTASS---GVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQ-NEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVS-QRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRG------AGGADGDMECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDS-FSCPRCGTFFATSRRWV 432
             L TAS+    V++V+Q+DA +LD EL D+L+ QL S F+  F    + +K++PEL A+L F L+R +I   +  T G ++QNL+F D  A    + S A  VDA  P  S Q+ + G L I G++ ++R+ R  L++ W                    G GE  +       W+     A+   E +F+   L+N+L FL  G Y +L++R++ MRLVY        RN++F+F+NRQL+W  FT+  + +VPLV+ + L+  V   I          G    G SE          G  D + + + C   +   PY T+CGH YCYYC++T  + D S FSCPRCG    TS R V
Sbjct:   68 ALITASTVPLRVLRVSQLDAELLDNELEDMLKEQLWSAFSL-FKKFNIKEKFQPELSAILQFSLYRLSICAPSNATYGCQLQNLKFRDERAHQGGLQSIA--VDA--PLSSYQKTMYGILQIGGEYMWSRINR--LLSSW--------------------GWGELDTNNPRKTIWQ-----AIQVLEKIFKAMSLVNYLYFLCTGKYRTLIERVLSMRLVYARRE--VTRNVSFEFLNRQLVWHAFTEFLMFLVPLVNLERLKNSVVKRI---------FGGTQEGASELPSHICAICYGNQDENGDVLSC---TLNIPYETNCGHRYCYYCIQTKLMTDPSGFSCPRCGETVTTSHRVV 381          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|545356613|ref|XP_005643998.1| (hypothetical protein COCSUDRAFT_38277 [Coccomyxa subellipsoidea C-169] >gi|384245962|gb|EIE19454.1| hypothetical protein COCSUDRAFT_38277 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 171.014 bits (432), Expect = 3.374e-46
Identity = 108/342 (31.58%), Postives = 167/342 (48.83%), Query Frame = 0
Query:   94 MKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDMECVVCGEESAQTPY-VTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRWVPG 434
            M+ +Q+DA  LD+EL  +L+ Q   +F+     P ++   +PEL   LD L+FRFT++   PTPG  + NLR+ +     +      S ++       QR   G   +  ++ +AR  + A    W D+ +                           G W R  +R++  AES F+LA L+NFL+FLR G Y S+L+RL+G RLVY  S G  AR ++F+++NRQL+W   ++L L ++PL++   ++  V   +                     G+ G+D    C +CG      PY    CGH +CYYCL+     D S+ CP+CG   +  RRW PG
Sbjct:    1 MRASQLDAARLDSELTAMLREQFMRIFS--LCQPRLITALQPELTLFLDILIFRFTVWSGRPTPGSALMNLRYRNERQASSPAQPGRSGLEGAGLNRMQRTTYGLGVVVLRYIWARTDQLAATQHWGDQPR---------------------------GSWGRLMWRSMRWAESAFKLASLLNFLLFLRYGRYRSVLERLLGARLVY--SKGSMARALSFEYLNRQLVWHELSELLLFLLPLINVGRIKALVIYFLIA------------------DGSSGSDSRQLCAICGASEIHVPYSAVPCGHRFCYYCLRARTQSDPSYKCPQCGAGISAMRRWRPG 293          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|301115047|ref|XP_002999293.1| (peroxisome assembly protein, putative [Phytophthora infestans T30-4] >gi|262111387|gb|EEY69439.1| peroxisome assembly protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 169.474 bits (428), Expect = 1.905e-45
Identity = 112/346 (32.37%), Postives = 169/346 (48.84%), Query Frame = 0
Query:   91 SGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLG---FLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRL-VYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRG-AGGADGDM-ECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRR 430
            S  ++VN+ DA +LD+E+L LL+  + SMF+   F PGVV+  KPE+ A+L  +LF FT     PTPGM+++ LR+                    AP +  R  +G    L +   + + RL R+   + W                A+A  +G+RS G       + R    + + E+L      +N L+FLR G+Y SL +R +GM++    PS+  A R+INF++M RQLLWE   +     +P + W   R                        + F+G    AD  + +C +CG    QTPY+T C H+YCYYCL+TA   +D F+C  CG  F +S+R
Sbjct:   39 SSNLRVNKWDALILDSEILGLLKTPMKSMFS--MFDPGVVEHVKPEIDAVLGAVLFAFTTGVGRPTPGMKLEKLRY--------------------APHLLTRRRVGVFFLLSVGVPYAWKRLVRYLSSSRWT---------------ARAASRGDRSDGEVTS---RERILAVMKKLETLVITCQFVNLLIFLRKGTYRSLPERCLGMKMESITPST--APRSINFEYMTRQLLWEGLMEFGNFALPFLTWSSSR----------------------TSAAFQGRLSVADARLSQCCLCGISPPQTPYITSCKHVYCYYCLQTAVATEDDFACVACGVRFDSSQR 320          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|1173960014|gb|OQS06183.1| (peroxisome assembly protein [Thraustotheca clavata])

HSP 1 Score: 169.474 bits (428), Expect = 2.108e-45
Identity = 106/347 (30.55%), Postives = 167/347 (48.13%), Query Frame = 0
Query:   90 SSGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAA-RNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDMECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRWVPGH 435
            +S   +VN+ DA VLD+E++ L++  + SMFA   F PG+++KY+PE+  +   LLF  ++  ++PTPGM++QNL+F     +   +                   L FL +   + + R+ R  L   W ++          ++ A+A+ Q   +                + R  ++  L  L+N L F + G Y SL +RLVGM+L   P       R I F++MNRQL+W+ F +    V+PL++W    R    L++Q      A     G       A        C +C    A+TPY+T CGH YCY+CL+TA   D +++C  CG  F +S R   GH
Sbjct:   28 ASTNYRVNKWDALVLDSEIVALMKHPIKSMFA--LFQPGLMEKYQPEIDGVTYALLFALSVGMHQPTPGMKLQNLQFAKSSLVWKKIVP-----------------LFFLSVGIPYAWQRIHRALLSYRWRED---------RSTQAEAKYQHFLT---------------MIHRVSTVAALVKLVNHLAFWKQGQYRSLPERLVGMKLT--PLKHTVIPRTITFEYMNRQLVWDGFVEFCYFVLPLINWQRFGR----LLKQTTKQLVATDTNEGNNDSQLTA--------CALCSVTPAKTPYITSCGHQYCYFCLQTAVAMDPNYTCAMCGEVFESSERLTAGH 317          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|470249931|ref|XP_004367197.1| (RING zinc finger-containing protein [Dictyostelium fasciculatum] >gi|328871844|gb|EGG20214.1| RING zinc finger-containing protein [Dictyostelium fasciculatum])

HSP 1 Score: 172.94 bits (437), Expect = 7.951e-45
Identity = 99/328 (30.18%), Postives = 166/328 (50.61%), Query Frame = 0
Query:   90 SSGVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRR-------QVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDME-CVVCGEESAQTPYVTDCGHIYCYYCLKTA 409
            S+ +++V+Q+D+  LD E+LDLL+ Q   +F+  FF P  +  ++PE+  +L   +F+ +IF    T G ++QNL + +  A   S  S   +       + Q+   G + I G+W +AR+ R ++   W                           G R     K++ +  L R ESL+++  ++NFL FL  G Y +L  RL+GMRLVY   S   +R I+F++MNRQL+W  FT+  L ++PL++ D ++        Q    I QR       G      ++      A   ++ C +C ++    PY++DCGH++CYYC+KT+
Sbjct:   64 STSIVRVSQLDSVKLDEEILDLLKTQFMKIFS--FFKPTFIQTFQPEINLILKAAIFKLSIFNLGNTYGNQLQNLTYRNEFAFDRSKGSDTLT----KLTLRQKWASGLINIGGEWAWARINRISINEAW---------------------------GERPDSDIKKKIWNLLNRLESLYKILSVLNFLTFLYDGKYVTLANRLLGMRLVYAHPS--LSRRISFEYMNRQLVWHGFTEFFLFIMPLINIDKIKNFIYRTFIQKPSNILQRGNNGNNGGNVNAVSNQLTPEQMAPQVLQRCPICLQDPINIPYISDCGHLFCYYCIKTS 356          
BLAST of EWM25424.1 vs. NCBI_GenBank
Match: gi|1205978178|ref|XP_021302383.1| (peroxisome biogenesis protein 2-like [Sorghum bicolor] >gi|1205978180|ref|XP_021302384.1| peroxisome biogenesis protein 2-like [Sorghum bicolor] >gi|992161247|gb|KXG24013.1| hypothetical protein SORBI_3008G172300 [Sorghum bicolor] >gi|992161248|gb|KXG24014.1| hypothetical protein SORBI_3008G172300 [Sorghum bicolor])

HSP 1 Score: 164.466 bits (415), Expect = 2.492e-43
Identity = 102/340 (30.00%), Postives = 173/340 (50.88%), Query Frame = 0
Query:   92 GVMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASSVDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGAGGGSEFRGAGGADGDMECVVCGEESAQTPYVT-DCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRR 430
             + +VNQ DA  LD E+  +L+ QL  +F+     PG++ +Y+PEL A L+FL++RF+I+ ++PTPG  + NLR+ D  A   +     + ++     VSQ++      + GQ+ ++RL+  +    W D  Q P   ++H                        RA+  +  AE L+R A L N L+FL  G Y ++++R++  RLVYG  S    R ++F++MNRQL+W  F+++ L ++PL++   +++ +                     S+ + AG +  + +C +C   S   P++   C H YCYYCL+T C    S+ CPRC       +R
Sbjct:   45 SISRVNQFDAARLDVEMSAMLKEQLLKVFS--LVKPGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDEWAAPITGKEVRTGLEGPGLSVSQKIFYCISFVGGQYIWSRLQSFSAFRRWGDSEQRP---LAH------------------------RAWGLVQNAEVLYRAASLFNLLLFLHGGRYKTIVERILKARLVYG--SPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKKFLLPF------------------SKDKSAGSSGDEADCPIC-RSSPSIPFIALPCQHRYCYYCLRTRCSATSSYRCPRCNEVVVAIQR 334          
The following BLAST results are available for this feature:
BLAST of EWM25424.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107185|gb|EWM25424.1|0.000e+0100.00ring zinc finger-containing protein [Nannochlorops... [more]
gi|299116340|emb|CBN76144.1|7.923e-5442.53putative RING finger protein [Ectocarpus siliculos... [more]
gi|1160572115|ref|XP_020433484.1|2.409e-5130.72RING zinc finger-containing protein [Polysphondyli... [more]
gi|330797837|ref|XP_003286964.1|1.476e-5029.06hypothetical protein DICPUDRAFT_150983 [Dictyostel... [more]
gi|1183370219|gb|ORX96129.1|6.532e-4834.72hypothetical protein K493DRAFT_314644 [Basidiobolu... [more]
gi|545356613|ref|XP_005643998.1|3.374e-4631.58hypothetical protein COCSUDRAFT_38277 [Coccomyxa s... [more]
gi|301115047|ref|XP_002999293.1|1.905e-4532.37peroxisome assembly protein, putative [Phytophthor... [more]
gi|1173960014|gb|OQS06183.1|2.108e-4530.55peroxisome assembly protein [Thraustotheca clavata... [more]
gi|470249931|ref|XP_004367197.1|7.951e-4530.18RING zinc finger-containing protein [Dictyostelium... [more]
gi|1205978178|ref|XP_021302383.1|2.492e-4330.00peroxisome biogenesis protein 2-like [Sorghum bico... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5296rna5296Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications