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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100005g60.6698.mrna |
Orig protein id | gnl|cribi|Naga_100005g60.6698 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002465.1 | supercontig | CM002465.1:579525..582363 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5271 ID=rna5271|Name=rna5271|organism=Nannochloropsis gaditana|type=mRNA|length=750bp ATGCCCGTGCTAACCGTATTCACCCTCGATTACCACCACTTCTCTTCTTC TCTCATACTACCTTCCGGTACTCGCGTCCTCTCTGCACTGCCCTGGCAGC CCCTGGTGCTCTCAAGTCAACGCATCAACGGTGCTCAACACTCTACAAGC TTTAGATTTATTCGACCAATTTTGAGCGTCGCGCAGCAGCACTGGAAGAT TTGCAGCGCGGTATTACAAAAGCAAAAGCAAGGTCACGAGTTTGGCTCCC GACTTGCTCCTCTATATCATTACTTGACGATATCACGTCACAACAGCCAT TACGTGACCATGCCTTTATACCAACAACTCATCATCGCCCGCGACATTGC TAAGGCACCGGAGCTTACAAGCCTTTTAAAGCAGTGCGCCAAGACAGTTT TAAGCAATGGGGGCGCCATGCGCGGGTTCGAGAATCACGGCCTGCGAGCT CTCAGCCATCGACTTCGGAATCGCCGAGCAATGGAGGAAGAGCAGAAATA TCATTGGCGGGCACGCTATATATCCTCCTACTTCGACGTCAGCCCCGATA CGGTAAAGGAAGTAGAGCGAGTATTACGTCTGGACGAGAATGTCCTACGA TTCTTCACCTTGAGGCCAAAGACCCAGGCAGACCTCATCCGGACTCGCAC CGGCTTTCGCGCTGCGTTGTGGACAGAAGAGCGTTCAGTGGAAAAAACTG CAGAAAATGCACGCGAAGAGAAACGGAAACTGTTTCACGAGGAACCGTGA back to topprotein sequence of rna5271 >rna5271-protein ID=rna5271-protein|Name=rna5271|organism=Nannochloropsis gaditana|type=polypeptide|length=460bp MPARMTYAFLLGLALLFHSPTSINGFFFRPSSGRYISRPQRSAPLTSVCA VKPEDLVISPGGSNDDFSNEQELDYLEWLVRKFKRKGRMEEARELQADVR VRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVV VGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAA GSNLEQRLFATNVFVRRQGMWFIAHHHATLLKAPASDKPPQNQQQQNAAL MQQLQQSLGLNGNKIINLGGLKGQNGAGNGAGGSMGSLDDLAAQLGALER QLGAGEPRKPRVRMLKDGKYQILSDEEEEEEEDEDEESVHRDKALTRRTV RAIQQLFNEGRISIEQKRRLLNEIIQHSNHEVPSMVEIAYELLLRDDDAE NSPGGESKTLPAGQKSEAAEGERTKGSKSATSGASRADDILNEFLEQCRI IASAGEDDEE back to topmRNA from alignment at CM002465.1:579525..582363+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5271 ID=rna5271|Name=rna5271|organism=Nannochloropsis gaditana|type=mRNA|length=2839bp|location=Sequence derived from alignment at CM002465.1:579525..582363+ (Nannochloropsis gaditana) GAGGGGAAAATGTCCCGTTGCCTTCTTTCATCAGCTAGGTCTGCATTGCT
TCCACTGACGCGCCCAAAGCATGCATGGCTCATCATTGGTGTATACCTCG
CGATGGTAGCAAGCATGTGGGCGGAGAAAAGGCGCAGTCTCGCAGCCTGC
ACGGCCAACATGGGGTACAGGGACCGGAATTGCTTGTGGGAGTGTTCGAA
GGGCGGCGTGGCGCGAAGATACTCGGCGAGGGAGACTCTCCCCTGGAGAG
ACCTGTGTGCTGGGAGTGCGGAGGACGTGCACCTCGCGGCGTCGTCAGAC
CCTTTTGTGTTGTCATGTGCCCAGTTGCTATGTAGACTACCGCCTTTTCA
CCCCCTTTTGGCATATTCCTCTTACTTGACTTCACAGGTGGGGTCAAGTA
GGATTCATAACAGTAGCATCCTTTGAAGGTTCTTCGGAAACCATGCCGGC
AAGAATGACATACGCTTTCTTACTGGGTCTTGCTCTGCTGTTTCATTCGC
CTACAAGCATTAATGGCTTCTTCTTTCGGCCATCGTCTGGACGGTACATT
TCAAGTGAGTATTTTTTCATCTCGGCGGGCAGCAGCCCCCCCTCGGACGA
AAGAAGTGATGACTCATTTTCCTCACGTCTCTCGCAGGGCCGCAACGCTC
AGCTCCTCTCACAAGTGTGTGCGCCGTTAAACCGGAAGATCTGGTCATCT
CCCCCGGAGGAAGCAACGACGATGTAAGTTCTCGTCAGGCTTTCCTTAAA
ATGCACGTCTCTGGTTGTGGAAGGTgagcttttcttccctcatGACCCGC
TCTCACTTTACGTTATTCTCCAAACCTCCTCAGTTCTCCAATGAGCAAGA
ACTGGATTACCTAGAGTGGTTGGTCAGAAAATTCAAACGGAAAgggcgga
tggaggaggcccgAGAGCTGCAGGCGGACGTGCGAGTGCGTCAAGAGTAC
GACGTGCGGGCGGTGACCAGGCTCAATGAAGTCTTCTATCAGGCCTTCAC
GAAGCAGGACCCCAAGGTGATGGCCGAGCTCTGGCTTCGAGAGCCCGAGG
TCTCGTGCATTCATCCGGGCGTGGCAGAGGTGGTCGTTGGCTACGACCGC
GTTATGCGGGTGTGGAAGGACATTCTTGCCCCGAAGCGCGCCTGGATCCG
CATCACGCCCGAGAACTcccaggtggtggtgcgcGGGAATACCGCTTTCG
CCTACTGCTTTGAGCGCGTTGTTCCCGACGCCGCAGGCTCCAATCTCGAG
CAACGCCTGTTTGCGACCAACGTCTTCGTGCGCCGGCAGGGTATGTGGTT
CATCGCACACCATCACGCAACATTGCTCAAAGCACCCGCCAGCGACAAGC
CCCCTCAAAACCAACAACAGCAGAACGCAGCCCTCATGCAACAGCTCCAG
CAAAGCTTGGGTTTAAATGGAAATAAAATCATCAATCTTGGTGGTCTCAA
AGGCCAGAATGGAGCAGGAAACGGCGCGGGCGGGTCCATGGGGTCGCTCG
ACGACTTGGCGGCACAGCTGGGAGCCCTGGAGCGGCAGCTGGGCGCGGGT
GAGCCTCGGAAACCCAGGGTGCGCATGTTGAAGGACGGGAAGTACCAGAT
TTtgtcggacgaggaggaggaggaggaagaggatgaggacgaggagagcg
tTCATCGAGACAAAGCACTTACGCGGAGGACCGTCCGGGCTATTCAGCAG
CTCTTCAATGAAGGACGCATCTCCATCGAACAGAAACGCCGCCTGCTCAA
TGAGATAATTCAACATTCCAACCACGAGGTTCCCTCTATGGTGGAGATCG
CGTACGAATTGTTGCTCCGGGACGACGACGCGGAGAACAGTCCAGGCGGG
GAGAGCAAGACACTGCCAGCCGGGCAGAAGAGCGAGGCTGCAGAAGGCGA
AAGGACAAAAGGCAGTAAGTCGGCTACGTCGGGGGCTAGTCGAGCAGATG
ATATCCTGAATGAGTTTCTCGAGCAGTGCCGCATCATTGCGTCcgcggga
gaggatgacgaggaatAAGGTAGCTCGTGAGCTTGCACAGAAGGTTTGTG
AAATATGGTCGAGTAACGGGTGCCTTGTACATTGGTGACAAGCCTTCATG
TTGCAGAGGGTCGATTCGTAGTTGAGGCTAAATCTTCTCGCTTGCGGCGG
GAGATGTGTTTGTCATCTATTAAGAAAGAAGAATGCTATCCACCTTTTGG
GCGTCTCTAAAACAAAAAAGATACATACCTTTGGtggatttcctccttcc
cctttttgaAAAATGACATGTCCTCTGTACACATGATGAGATCTAGAGGC
AATTTAAATGCTATCCGTCATAAGAAAAGCAGCCTACATCTAAGGTAGCA
AAAGAGGAGAGTTATCTTACATGCATTTCCTATGATCAACCGCTTTTTGC
TTTGCTTTCAAGATATTATACCGGCAGAAAGGAATAATCGCATGCACTGC
TTGTATTACTGTTAATCGCATGCACTGCTTGTATTACTGTTTCCGTCAAG
GCAAGCTTGGTCCATCGCGTACTTTGTTCTCAGCAATCTCACGCCCGCGC
TGAAATTCAGAGGAGCGAGTTCCCGCAAGACGGCTTTATACAATGAAACA
TTAGTAAAGCTGATAAAGGGTATTGCTGACAATGCGCAGTAGTACATTAA
AGCCAATGGAGTAACACCCTGCCGTGGCGATGCGCAGCAGTGCGTCATAG
CGTTCTCTGCTGGCGTAGTATGGACATCTGATATGCGAGCAGCGAGgacg
gacaaggaagaaTGAAAAAGACAATGAGATCCAGCCAAATAGCCCCCCAG
GCACCAAACGAATGCAAAATAATATTAAGTCTTAAAAGA back to topCoding sequence (CDS) from alignment at CM002465.1:579525..582363+ >rna5271 ID=rna5271|Name=rna5271|organism=Nannochloropsis gaditana|type=CDS|length=4149bp|location=Sequence derived from alignment at CM002465.1:579525..582363+ (Nannochloropsis gaditana) ATGCCGGCAAGAATGACATACGCTTTCTTACTGGGTCTTGCTCTGCTGTT TCATTCGCCTACAAGCATTAATGGCTTCTTCTTTCGGCCATCGTCTGGAC GGTACATTTCAAGGCCGCAACGCTCAGCTCCTCTCACAAGTGTGTGCGCC GTTAAACCGGAAGATCTGGTCATCTCCCCCGGAGGAAGCAACGACGATTT CTCCAATGAGCAAGAACTGGATTACCTAGAGTGGTTGGTCAGAAAATTCA AACGGAAAgggcggatggaggaggcccgAGAGCTGCAGGCGGACGTGCGA GTGCGTCAAGAGTACGACGTGCGGGCGGTGACCAGGCTCAATGAAGTCTT CTATCAGGCCTTCACGAAGCAGGACCCCAAGGTGATGGCCGAGCTCTGGC TTCGAGAGCCCGAGGTCTCGTGCATTCATCCGGGCGTGGCAGAGGTGGTC GTTGGCTACGACCGCGTTATGCGGGTGTGGAAGGACATTCTTGCCCCGAA GCGCGCCTGGATCCGCATCACGCCCGAGAACTcccaggtggtggtgcgcG GGAATACCGCTTTCGCCTACTGCTTTGAGCGCGTTGTTCCCGACGCCGCA GGCTCCAATCTCGAGCAACGCCTGTTTGCGACCAACGTCTTCGTGCGCCG GCAGGGTATGTGGTTCATCGCACACCATCACGCAACATTGCTCAAAGCAC CCGCCAGCGACAAGCCCCCTCAAAACCAACAACAGCAGAACGCAGCCCTC ATGCAACAGCTCCAGCAAAGCTTGGGTTTAAATGGAAATAAAATCATCAA TCTTGGTGGTCTCAAAGGCCAGAATGGAGCAGGAAACGGCGCGGGCGGGT CCATGGGGTCGCTCGACGACTTGGCGGCACAGCTGGGAGCCCTGGAGCGG CAGCTGGGCGCGGGTGAGCCTCGGAAACCCAGGGTGCGCATGTTGAAGGA CGGGAAGTACCAGATTTtgtcggacgaggaggaggaggaggaagaggatg aggacgaggagagcgtTCATCGAGACAAAGCACTTACGCGGAGGACCGTC CGGGCTATTCAGCAGCTCTTCAATGAAGGACGCATCTCCATCGAACAGAA ACGCCGCCTGCTCAATGAGATAATTCAACATTCCAACCACGAGGTTCCCT CTATGGTGGAGATCGCGTACGAATTGTTGCTCCGGGACGACGACGCGGAG AACAGTCCAGGCGGGGAGAGCAAGACACTGCCAGCCGGGCAGAAGAGCGA GGCTGCAGAAGGCGAAAGGACAAAAGGCAGTAAGTCGGCTACGTCGGGGG CTAGTCGAGCAGATGATATCCTGAATGAGTTTCTCGAGCAGTGCCGCATC ATTGCGTCcgcgggagaggatgacgaggaatAAATGCCGGCAAGAATGAC ATACGCTTTCTTACTGGGTCTTGCTCTGCTGTTTCATTCGCCTACAAGCA TTAATGGCTTCTTCTTTCGGCCATCGTCTGGACGGTACATTTCAAGGCCG CAACGCTCAGCTCCTCTCACAAGTGTGTGCGCCGTTAAACCGGAAGATCT GGTCATCTCCCCCGGAGGAAGCAACGACGATTTCTCCAATGAGCAAGAAC TGGATTACCTAGAGTGGTTGGTCAGAAAATTCAAACGGAAAgggcggatg gaggaggcccgAGAGCTGCAGGCGGACGTGCGAGTGCGTCAAGAGTACGA CGTGCGGGCGGTGACCAGGCTCAATGAAGTCTTCTATCAGGCCTTCACGA AGCAGGACCCCAAGGTGATGGCCGAGCTCTGGCTTCGAGAGCCCGAGGTC TCGTGCATTCATCCGGGCGTGGCAGAGGTGGTCGTTGGCTACGACCGCGT TATGCGGGTGTGGAAGGACATTCTTGCCCCGAAGCGCGCCTGGATCCGCA TCACGCCCGAGAACTcccaggtggtggtgcgcGGGAATACCGCTTTCGCC TACTGCTTTGAGCGCGTTGTTCCCGACGCCGCAGGCTCCAATCTCGAGCA ACGCCTGTTTGCGACCAACGTCTTCGTGCGCCGGCAGGGTATGTGGTTCA TCGCACACCATCACGCAACATTGCTCAAAGCACCCGCCAGCGACAAGCCC CCTCAAAACCAACAACAGCAGAACGCAGCCCTCATGCAACAGCTCCAGCA AAGCTTGGGTTTAAATGGAAATAAAATCATCAATCTTGGTGGTCTCAAAG GCCAGAATGGAGCAGGAAACGGCGCGGGCGGGTCCATGGGGTCGCTCGAC GACTTGGCGGCACAGCTGGGAGCCCTGGAGCGGCAGCTGGGCGCGGGTGA GCCTCGGAAACCCAGGGTGCGCATGTTGAAGGACGGGAAGTACCAGATTT tgtcggacgaggaggaggaggaggaagaggatgaggacgaggagagcgtT CATCGAGACAAAGCACTTACGCGGAGGACCGTCCGGGCTATTCAGCAGCT CTTCAATGAAGGACGCATCTCCATCGAACAGAAACGCCGCCTGCTCAATG AGATAATTCAACATTCCAACCACGAGGTTCCCTCTATGGTGGAGATCGCG TACGAATTGTTGCTCCGGGACGACGACGCGGAGAACAGTCCAGGCGGGGA GAGCAAGACACTGCCAGCCGGGCAGAAGAGCGAGGCTGCAGAAGGCGAAA GGACAAAAGGCAGTAAGTCGGCTACGTCGGGGGCTAGTCGAGCAGATGAT ATCCTGAATGAGTTTCTCGAGCAGTGCCGCATCATTGCGTCcgcgggaga ggatgacgaggaatAAATGCCGGCAAGAATGACATACGCTTTCTTACTGG GTCTTGCTCTGCTGTTTCATTCGCCTACAAGCATTAATGGCTTCTTCTTT CGGCCATCGTCTGGACGGTACATTTCAAGGCCGCAACGCTCAGCTCCTCT CACAAGTGTGTGCGCCGTTAAACCGGAAGATCTGGTCATCTCCCCCGGAG GAAGCAACGACGATTTCTCCAATGAGCAAGAACTGGATTACCTAGAGTGG TTGGTCAGAAAATTCAAACGGAAAgggcggatggaggaggcccgAGAGCT GCAGGCGGACGTGCGAGTGCGTCAAGAGTACGACGTGCGGGCGGTGACCA GGCTCAATGAAGTCTTCTATCAGGCCTTCACGAAGCAGGACCCCAAGGTG ATGGCCGAGCTCTGGCTTCGAGAGCCCGAGGTCTCGTGCATTCATCCGGG CGTGGCAGAGGTGGTCGTTGGCTACGACCGCGTTATGCGGGTGTGGAAGG ACATTCTTGCCCCGAAGCGCGCCTGGATCCGCATCACGCCCGAGAACTcc caggtggtggtgcgcGGGAATACCGCTTTCGCCTACTGCTTTGAGCGCGT TGTTCCCGACGCCGCAGGCTCCAATCTCGAGCAACGCCTGTTTGCGACCA ACGTCTTCGTGCGCCGGCAGGGTATGTGGTTCATCGCACACCATCACGCA ACATTGCTCAAAGCACCCGCCAGCGACAAGCCCCCTCAAAACCAACAACA GCAGAACGCAGCCCTCATGCAACAGCTCCAGCAAAGCTTGGGTTTAAATG GAAATAAAATCATCAATCTTGGTGGTCTCAAAGGCCAGAATGGAGCAGGA AACGGCGCGGGCGGGTCCATGGGGTCGCTCGACGACTTGGCGGCACAGCT GGGAGCCCTGGAGCGGCAGCTGGGCGCGGGTGAGCCTCGGAAACCCAGGG TGCGCATGTTGAAGGACGGGAAGTACCAGATTTtgtcggacgaggaggag gaggaggaagaggatgaggacgaggagagcgtTCATCGAGACAAAGCACT TACGCGGAGGACCGTCCGGGCTATTCAGCAGCTCTTCAATGAAGGACGCA TCTCCATCGAACAGAAACGCCGCCTGCTCAATGAGATAATTCAACATTCC AACCACGAGGTTCCCTCTATGGTGGAGATCGCGTACGAATTGTTGCTCCG GGACGACGACGCGGAGAACAGTCCAGGCGGGGAGAGCAAGACACTGCCAG CCGGGCAGAAGAGCGAGGCTGCAGAAGGCGAAAGGACAAAAGGCAGTAAG TCGGCTACGTCGGGGGCTAGTCGAGCAGATGATATCCTGAATGAGTTTCT CGAGCAGTGCCGCATCATTGCGTCcgcgggagaggatgacgaggaatAA back to top
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