EWM25404.1, cds5258 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|585107165|gb|EWM25404.1| (hypothetical protein Naga_100005g60 [Nannochloropsis gaditana]) HSP 1 Score: 949.118 bits (2452), Expect = 0.000e+0 Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0 Query: 1 MPARMTYAFLLGLALLFHSPTSINGFFFRPSSGRYISRPQRSAPLTSVCAVKPEDLVISPGGSNDDFSNEQELDYLEWLVRKFKRKGRMEEARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHATLLKAPASDKPPQNQQQQNAALMQQLQQSLGLNGNKIINLGGLKGQNGAGNGAGGSMGSLDDLAAQLGALERQLGAGEPRKPRVRMLKDGKYQILSDEEEEEEEDEDEESVHRDKALTRRTVRAIQQLFNEGRISIEQKRRLLNEIIQHSNHEVPSMVEIAYELLLRDDDAENSPGGESKTLPAGQKSEAAEGERTKGSKSATSGASRADDILNEFLEQCRIIASAGEDDEE 460 MPARMTYAFLLGLALLFHSPTSINGFFFRPSSGRYISRPQRSAPLTSVCAVKPEDLVISPGGSNDDFSNEQELDYLEWLVRKFKRKGRMEEARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHATLLKAPASDKPPQNQQQQNAALMQQLQQSLGLNGNKIINLGGLKGQNGAGNGAGGSMGSLDDLAAQLGALERQLGAGEPRKPRVRMLKDGKYQILSDEEEEEEEDEDEESVHRDKALTRRTVRAIQQLFNEGRISIEQKRRLLNEIIQHSNHEVPSMVEIAYELLLRDDDAENSPGGESKTLPAGQKSEAAEGERTKGSKSATSGASRADDILNEFLEQCRIIASAGEDDEE Sbjct: 1 MPARMTYAFLLGLALLFHSPTSINGFFFRPSSGRYISRPQRSAPLTSVCAVKPEDLVISPGGSNDDFSNEQELDYLEWLVRKFKRKGRMEEARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHATLLKAPASDKPPQNQQQQNAALMQQLQQSLGLNGNKIINLGGLKGQNGAGNGAGGSMGSLDDLAAQLGALERQLGAGEPRKPRVRMLKDGKYQILSDEEEEEEEDEDEESVHRDKALTRRTVRAIQQLFNEGRISIEQKRRLLNEIIQHSNHEVPSMVEIAYELLLRDDDAENSPGGESKTLPAGQKSEAAEGERTKGSKSATSGASRADDILNEFLEQCRIIASAGEDDEE 460
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|551678830|ref|XP_005842167.1| (hypothetical protein GUITHDRAFT_149726 [Guillardia theta CCMP2712] >gi|428186337|gb|EKX55187.1| hypothetical protein GUITHDRAFT_149726 [Guillardia theta CCMP2712]) HSP 1 Score: 131.724 bits (330), Expect = 4.098e-30 Identity = 126/451 (27.94%), Postives = 197/451 (43.68%), Query Frame = 0 Query: 10 LLGLALLFHSPTSI----------NGFFFRPSSGRYISRPQRSAPLTS---------------VCAVK--------PEDLVI------SPGGSNDDFSNEQELDY----LEWLVRKFKRKGRMEEARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIR---ITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHATLLKA-PASDKPPQNQQQQNAALMQQLQQSL-----GLNGNKIIN--LGGLKG-----------QNGAGNGAGGSMGSLDDLAAQLGALERQLGAGEPRKPRVRMLKDGKYQILSDEEEEEEEDEDEESVHRDKALTRRTVRAIQQLFNEGRISIEQKRRLLNEIIQHSNH-EVPSMVEIAYELLL 394 LLGL L SP S + RPSSG I SA +C K P+D ++ + G +D +EQ ++ LE + + R EA L+ ++ D AV + N FY AF+ ++ ++M +W P V CIHPG A+ ++GYD ++ +W+++ + + ITP N +V VRG +AF C E V + E+R+ ATNVF + G W++ HHHA+ PAS + A +++ SL N ++I++ + L+G NG G+G GSM + L + R+ +D +L++ E E +T RTV A+++L EG I+ +QKR LL ++++H E S VEIAYELL+ Sbjct: 10 LLGLCL---SPVSYSFSVSNLPHYHNLVLRPSSGSTICTKMPSAANVCPNHCRAKAVSAFRDWMCCKKRDGGEELDPDDRIVDRHSDKTKSGMDDLQPDEQVIEKWVEKLETSLESAVKNERYSEASTLRDELSRMHMDDTSAVLKTNSDFYNAFSTKNIELMGTVWHNSPHVQCIHPG-AKPLLGYDNIVNMWRNMFQARDKAFKSTAITPSNVKVHVRGTSAFVTCTEEV----SSPGTERRMLATNVFRKLGGRWYLVHHHASQASVRPASIEDLLQGNSGGARVIRFDASSLREGDGHANADEIVDEIVRALQGALENAEEANQSSNGEGSGMVGSM---------MFELSDDDKDDDMRRGLRDDGRDLGDDVLNERELME-------------GVTERTVAALRKLAKEGHITRDQKRVLLTDVVEHHQAGECASEVEIAYELLV 430
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|1056032088|ref|WP_067560347.1| (DUF4440 domain-containing protein [Oceanibaculum pacificum] >gi|1016452156|gb|KZC97642.1| DUF4440 domain-containing protein [Oceanibaculum pacificum]) HSP 1 Score: 90.8929 bits (224), Expect = 2.616e-18 Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0 Query: 106 DVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHATLLKAPASDKPPQNQQQQNAAL 250 D A+ NE FY AF +D M ++W + V+CIHPG ++ G + VM+VW+ ILA A I ITP ++ + G+ F CFE S E L ATN+FV+ W + HH A P D+PP+ ++ A+ Sbjct: 3 DRTALLFANEAFYAAFATRDMGAMEDIWAKRAPVACIHPGWG-LLEGREAVMQVWRSILAGNNAPI-ITPRGAKAFLYGDAGFVTCFE--------SLPEGFLIATNLFVKEDAAWRLVHHQA----GPTQDQPPEEEETAGRAM 133
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|1137193823|gb|OMO66494.1| (hypothetical protein CCACVL1_21113 [Corchorus capsularis]) HSP 1 Score: 90.8929 bits (224), Expect = 9.195e-18 Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = 0 Query: 91 EARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHAT 229 EA +++ D+RV E +V +N FY AF + D M LW + V C+HPG A + GYD VM W+ + + I +N QV V+G+ + C E V GS+ + F TNVF R G WFI+ HHA+ Sbjct: 41 EAAKIRDDLRVLHEDSKASVLAINSRFYDAFRRGDLATMQNLWAKGDNVCCVHPG-ANGISGYDYVMESWEVVWMNYEFPLEIELKNVQVHVKGDMGYVTCMEFV--KTKGSSWGGQ-FVTNVFERINGQWFISIHHAS 175
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|1137235285|gb|OMO97356.1| (hypothetical protein COLO4_14664 [Corchorus olitorius]) HSP 1 Score: 90.5077 bits (223), Expect = 7.580e-17 Identity = 52/139 (37.41%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 91 EARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHAT 229 EA +++ D+RV E +V +N FY AF + D M +LW + V C+HPG A + GYD VM W+ + + I +N QV V+G+ + C E V GS+ + F TNVF R G WFI+ HHA+ Sbjct: 121 EAAKIRDDLRVLHEDSKASVLAINSRFYDAFRRGDLATMQKLWSKGDNVCCVHPG-ANGISGYDYVMESWEVVWMNYEFPLEIELKNVQVHVKGDMGYVTCMEFV--KTKGSSWGGQ-FVTNVFERINGQWFISIHHAS 255
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|720021333|ref|XP_010262696.1| (PREDICTED: F-box protein SKIP8 isoform X3 [Nelumbo nucifera] >gi|720021337|ref|XP_010262697.1| PREDICTED: F-box protein SKIP8 isoform X3 [Nelumbo nucifera]) HSP 1 Score: 88.1965 bits (217), Expect = 2.047e-16 Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = 0 Query: 91 EARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHAT 229 +A +++ +R+ E +V N FY +F D M LW + V C+HPGV+ + GYD VM W+ + A + I +N QV VRG+ + C E V GSN ++ FATNVF R G WFI HHA+ Sbjct: 88 QAAKIRDSLRLLHEDSRASVLAANARFYNSFRTGDLATMQSLWAKGEHVCCVHPGVSG-ISGYDLVMGSWEFVWADYEFPLEIELKNVQVHVRGDVGYVTCTE--VVKTKGSNWGKQ-FATNVFERIDGRWFICIHHAS 222
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|720021330|ref|XP_010262695.1| (PREDICTED: uncharacterized protein LOC104601157 isoform X2 [Nelumbo nucifera]) HSP 1 Score: 89.3521 bits (220), Expect = 2.881e-16 Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = 0 Query: 91 EARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHAT 229 +A +++ +R+ E +V N FY +F D M LW + V C+HPGV+ + GYD VM W+ + A + I +N QV VRG+ + C E V GSN ++ FATNVF R G WFI HHA+ Sbjct: 144 QAAKIRDSLRLLHEDSRASVLAANARFYNSFRTGDLATMQSLWAKGEHVCCVHPGVSG-ISGYDLVMGSWEFVWADYEFPLEIELKNVQVHVRGDVGYVTCTE--VVKTKGSNWGKQ-FATNVFERIDGRWFICIHHAS 278
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|502739877|ref|WP_012974861.1| (hypothetical protein [Azospirillum lipoferum] >gi|288911446|dbj|BAI72935.1| hypothetical protein AZL_022970 [Azospirillum sp. B510]) HSP 1 Score: 84.7297 bits (208), Expect = 4.410e-16 Identity = 50/126 (39.68%), Postives = 68/126 (53.97%), Query Frame = 0 Query: 113 LNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDIL-APKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHATLLKAPASD 237 LN+ FY+AFT +D M LW VSCIHPG + G D V+ W+D+L AP I + N +V + G+TA C E ++ DA L ATN+F R +G W +AHH A + P +D Sbjct: 13 LNQAFYRAFTNRDAAAMEALWAETLPVSCIHPGW-TALFGRDAVLTSWRDVLRAPSG--IAVQARNERVTLHGDTALVVC-EEMLGDAV-------LAATNLFAREKGSWRLAHHQAGPIAPPRAD 127
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|720021324|ref|XP_010262693.1| (PREDICTED: uncharacterized protein LOC104601157 isoform X1 [Nelumbo nucifera] >gi|720021327|ref|XP_010262694.1| PREDICTED: uncharacterized protein LOC104601157 isoform X1 [Nelumbo nucifera]) HSP 1 Score: 88.9669 bits (219), Expect = 5.405e-16 Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = 0 Query: 91 EARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHAT 229 +A +++ +R+ E +V N FY +F D M LW + V C+HPGV+ + GYD VM W+ + A + I +N QV VRG+ + C E V GSN ++ FATNVF R G WFI HHA+ Sbjct: 164 QAAKIRDSLRLLHEDSRASVLAANARFYNSFRTGDLATMQSLWAKGEHVCCVHPGVSG-ISGYDLVMGSWEFVWADYEFPLEIELKNVQVHVRGDVGYVTCTEVV--KTKGSNWGKQ-FATNVFERIDGRWFICIHHAS 298
BLAST of EWM25404.1 vs. NCBI_GenBank
Match: gi|575412894|gb|ETW98556.1| (hypothetical protein ETSY2_42625 [Candidatus Entotheonella sp. TSY2]) HSP 1 Score: 84.7297 bits (208), Expect = 6.331e-16 Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = 0 Query: 101 VRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIAHHHAT-LLKAPASDKPPQNQQ 244 V Q+ + V R NE FY+AF D +MA +W++ C+HPG +++ G++ V + W I A ++R + V G+ A+ C E + D GS R+ ATNV+ + W+I HHHA+ +L+ P S + P ++Q Sbjct: 2 VSQDERLAQVRRANERFYRAFESLDMDLMAAVWVQNDRAKCVHPG-WDMLEGWNVVAQSWAAIFA-NTDYMRFVITDVAVHFYGHVAWVTCVENLT-DRDGSTQVSRVLATNVYEQHDDDWYIVHHHASPVLRPPPSFRDPDDEQ 143 The following BLAST results are available for this feature:
BLAST of EWM25404.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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