EWM25461.1, cds5241 (CDS) Nannochloropsis gaditana

Overview
NameEWM25461.1
Unique Namecds5241
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:541385..542086 +

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Properties
Property NameValue
Protein idEWM25461.1
ProductE2F-associated phosphoprotein
Orig transcript idgnl|cribi|Naga_100005g42.6755.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:541385..542086 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR019370E2F-assoc_phosphoprotein
Homology
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BLAST of EWM25461.1 vs. NCBI_GenBank
Match: gi|585107222|gb|EWM25461.1| (E2F-associated phosphoprotein [Nannochloropsis gaditana])

HSP 1 Score: 484.567 bits (1246), Expect = 2.448e-173
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 
Query:    1 MSEVCGEVSIAIHAIGKIQECFLSFSVTFIRRKLGARVFKLCVAADLLHVHFIVSGWVTFCFLLFSIDACIHCLRPSRALYHRYSKSTQTCLTAIRLGFIKFEERLKLVPPYNSFNDPARHRTRKIEYRAIFVSNCVFGRALNSGDWFQNRSQVSTEAPFRSSATLTMKSEGRGDCMTSADAVPKKQESERTEVNSQGEQPPAQTVACATCGTLLGVQDEEDIVHFLNVIASH 233
            MSEVCGEVSIAIHAIGKIQECFLSFSVTFIRRKLGARVFKLCVAADLLHVHFIVSGWVTFCFLLFSIDACIHCLRPSRALYHRYSKSTQTCLTAIRLGFIKFEERLKLVPPYNSFNDPARHRTRKIEYRAIFVSNCVFGRALNSGDWFQNRSQVSTEAPFRSSATLTMKSEGRGDCMTSADAVPKKQESERTEVNSQGEQPPAQTVACATCGTLLGVQDEEDIVHFLNVIASH
Sbjct:    1 MSEVCGEVSIAIHAIGKIQECFLSFSVTFIRRKLGARVFKLCVAADLLHVHFIVSGWVTFCFLLFSIDACIHCLRPSRALYHRYSKSTQTCLTAIRLGFIKFEERLKLVPPYNSFNDPARHRTRKIEYRAIFVSNCVFGRALNSGDWFQNRSQVSTEAPFRSSATLTMKSEGRGDCMTSADAVPKKQESERTEVNSQGEQPPAQTVACATCGTLLGVQDEEDIVHFLNVIASH 233
The following BLAST results are available for this feature:
BLAST of EWM25461.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107222|gb|EWM25461.1|2.448e-173100.00E2F-associated phosphoprotein [Nannochloropsis gad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5254rna5254Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications