EWM25480.1, cds5199 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|585107243|gb|EWM25480.1| (trna-splicing ligase [Nannochloropsis gaditana]) HSP 1 Score: 1058.51 bits (2736), Expect = 0.000e+0 Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0
Query: 1 MANGSVVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
MANGSVVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG
Sbjct: 1 MANGSVVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|255079850|ref|XP_002503505.1| (predicted protein [Micromonas commoda] >gi|327488439|sp|C1E9Y5.1|RTCB_MICSR RecName: Full=tRNA-splicing ligase RtcB homolog >gi|226518772|gb|ACO64763.1| predicted protein [Micromonas commoda]) HSP 1 Score: 846.269 bits (2185), Expect = 0.000e+0 Identity = 399/503 (79.32%), Postives = 445/503 (88.47%), Query Frame = 0
Query: 8 RTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
RT+ +EM FL R TPT++R+ +G VPNM+V G FYVN LE LMF EL+QH G VGGFLPAVKQ+ANVA LPGIV +SI LPDVHSGYGFAIGNVAAF ++D A+VSPGGVGFDINCGVR++RTNL E DV +EKL QSLFDHIPVGVGS+G+IPTS A LEAALEMGMDWSLREGYAWAED EHCEE GRM ADP KV RAKKRGLPQ+GTLGAGNHYAEIQVV+EI D AA +MGI+++GQV VMIHSGSRGLGHQVATDAL EMERAMARDGIL NDRQLACA+I SPEGQNYL+AM+ AAN+AWVNRSSMTFL RQAFAKMF+ TPDDLDMHV+YDVSHNIAK+EEH+ G KTLLVHRKGSTRAFPP+HPLIPVDYQ+TGQPVLIGGTMGTCSY+LTGT+KG+EETFGSTCHGAGRA+SRN SR L+YTEVL L+ KGI+IRVASPKLVMEEAPESYKDVT+VV+TCH+AGIS+KA+KLRPIAVVKG
Sbjct: 11 RTYAQEMEFLERVTPTQWRVREGFVPNMRVPGVFYVNKHLETLMFDELRQHVDRGDVGGFLPAVKQLANVACLPGIVSKSIALPDVHSGYGFAIGNVAAFDMSDPNAVVSPGGVGFDINCGVRVVRTNLHERDVTDIKEKLAQSLFDHIPVGVGSQGIIPTSPAGLEAALEMGMDWSLREGYAWAEDKEHCEEYGRMLNADPNKVSARAKKRGLPQMGTLGAGNHYAEIQVVDEIFDKHAADKMGIERLGQVMVMIHSGSRGLGHQVATDALTEMERAMARDGILVNDRQLACAKISSPEGQNYLSAMSCAANYAWVNRSSMTFLCRQAFAKMFDQTPDDLDMHVVYDVSHNIAKIEEHVVDGELKTLLVHRKGSTRAFPPHHPLIPVDYQYTGQPVLIGGTMGTCSYILTGTEKGMEETFGSTCHGAGRARSRNNSRNKLDYTEVLEKLKTKGIAIRVASPKLVMEEAPESYKDVTEVVNTCHDAGISKKAVKLRPIAVVKG 513
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|1022759492|gb|KZS05822.1| (tRNA-splicing ligase RtcB [Daphnia magna]) HSP 1 Score: 843.958 bits (2179), Expect = 0.000e+0 Identity = 399/503 (79.32%), Postives = 443/503 (88.07%), Query Frame = 0
Query: 8 RTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
R++EEE+ F+ R +P +RI KG VPNMKVEG FYVN LE LMF ELK + G VGGFLP +KQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAF + D +IVSPGGVGFDINCGVRL+RTNLTE+DV+ +E+LTQS+FDHIPVGVGSKGVIP +A DLE ALEMG+DWSLREGYAWAED EHCEE GRM ADP+KV +RAKKRGLPQLGTLGAGNHYAEIQVV+EI+D AA +MGI+ GQVC+MIHSGSRG GHQVATDALV MERAM RD I+TNDRQLACARI S EGQ+YL AM+AAANFAWVNRSSMTFL RQAFAK F +TPDDLDMH+IYDVSHNIAKVE+H G+ KTLLVHRKGSTRAFPP+HPLIPVDYQ TGQPVLIGGTMGTCSY+LTGT+KG+EETFGSTCHGAGRA SR KSR+ L+YTEVL L+E+GISIRVASPKLVMEEAPESYK+VT VVDTCH AGIS+K +KLRPIAV+KG
Sbjct: 3 RSYEEELKFIERLSPYSWRIKKGFVPNMKVEGIFYVNNNLENLMFEELKASSAQGLVGGFLPGMKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFDMDDPNSIVSPGGVGFDINCGVRLLRTNLTEKDVQPVKEQLTQSMFDHIPVGVGSKGVIPINAQDLEEALEMGVDWSLREGYAWAEDKEHCEEFGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIYDKWAATKMGIEHKGQVCIMIHSGSRGFGHQVATDALVTMERAMKRDNIVTNDRQLACARISSTEGQDYLKAMSAAANFAWVNRSSMTFLCRQAFAKQFNSTPDDLDMHLIYDVSHNIAKVEQHTVNGKLKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYILTGTEKGMEETFGSTCHGAGRALSRAKSRRNLDYTEVLDRLKEQGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 505
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|340371191|ref|XP_003384129.1| (PREDICTED: tRNA-splicing ligase RtcB homolog [Amphimedon queenslandica]) HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0 Identity = 396/506 (78.26%), Postives = 446/506 (88.14%), Query Frame = 0
Query: 5 SVVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
S VRT++EE +L + + +RI KG VPNMKVEG FYVN L++LMF EL+ H ++GGVGGFLPAVKQI NVAALPGIVG+SIGLPDVHSGYGFAIGN+AAF ++D EA+VSPGGVGFDINCGVRL+RTNL ++D+ +E+L QSLFDHIPVGVGSKGVIP +A DLE+ALEMGMDW+LREGY WAED EHCEE GRM QADP+KV RAKKRGLPQLGTLGAGNHYAEIQVVEEI D AAA+MGI++ QVCVMIHSGSRGLGHQVATDALVEME+AM RD I NDRQLACA+I+S EG+NYL MAAAAN+AWVNRSSMTFLTRQAFAKMF++TPDDLDMH+IYDVSHNIAKVE+H+ GR KTLLVHRKGSTRAFPP+HPLIPVDYQ TGQPVLIGGTMGTCSYVLTGTDKG ETFGSTCHGAGRA SR KSR+TL Y EVL +L ++GI+IRVASPKLVMEEAP+SYK+VT VV+TCH AGIS KA KL+PIAV+KG
Sbjct: 3 SAVRTYDEECSYLEKISNCSYRIKKGFVPNMKVEGLFYVNDHLKDLMFDELRHHCSSGGVGGFLPAVKQIGNVAALPGIVGKSIGLPDVHSGYGFAIGNMAAFDMSDPEAVVSPGGVGFDINCGVRLLRTNLFKKDIEPVKEQLAQSLFDHIPVGVGSKGVIPMTARDLESALEMGMDWTLREGYGWAEDKEHCEEYGRMLQADPSKVSQRAKKRGLPQLGTLGAGNHYAEIQVVEEIFDKHAAAKMGIEEKEQVCVMIHSGSRGLGHQVATDALVEMEKAMKRDNIEVNDRQLACAKIKSKEGENYLKGMAAAANYAWVNRSSMTFLTRQAFAKMFKSTPDDLDMHIIYDVSHNIAKVEQHIVSGREKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTDKGFTETFGSTCHGAGRALSRAKSRRTLGYEEVLESLAKQGIAIRVASPKLVMEEAPQSYKNVTDVVETCHSAGISNKAFKLKPIAVIKG 508
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|303272537|ref|XP_003055630.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|327488438|sp|C1MI97.1|RTCB_MICPC RecName: Full=tRNA-splicing ligase RtcB homolog >gi|226463604|gb|EEH60882.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0 Identity = 392/503 (77.93%), Postives = 444/503 (88.27%), Query Frame = 0
Query: 8 RTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
RT+++EM FL R + ++ +++G VPNM+V G FYVN LE LMF EL+QH +GG GGFLPAVKQ+ANVA LPGIVG+SI +PDVHSGYGF IGNVAAF ++D A+VSPGGVGFDINCGVR++RTNL E DV +EKL Q+LFDHIPVGVGS+G+IPTSAA LE+ALEMGMDWSLREGYAWAED EHCEE GRM ADP KV RAKKRGLPQ+GTLGAGNHYAEIQVV+EI D AA +MG+D +GQV VMIHSGSRGLGHQVATDAL EMERAMARDGI TNDRQLACARI S EGQNYL+AM+ AAN+AWVNRSSMTFL RQAFAKMF++TPDDLDMHV+YDVSHNIAK+EEHM G+ KTLLVHRKGSTRAFPP+HPLIPVDYQ+TGQPV+IGGTMGTCSY+LTGT KG++ETFGSTCHGAGRA+SRN SR L+Y EVL L+ KGISIRVASPKLVMEEAPESYKDVT+VV+TCH+AGIS+KA+KLRPIAVVKG
Sbjct: 5 RTYQQEMAFLSRVSANQWIVNEGFVPNMRVPGTFYVNKHLETLMFEELQQHVDSGGHGGFLPAVKQLANVACLPGIVGKSIAMPDVHSGYGFCIGNVAAFDMSDPAAVVSPGGVGFDINCGVRVVRTNLMESDVADVKEKLAQALFDHIPVGVGSQGIIPTSAAGLESALEMGMDWSLREGYAWAEDKEHCEEYGRMLTADPNKVSARAKKRGLPQMGTLGAGNHYAEIQVVDEIFDAHAAEKMGVDAVGQVMVMIHSGSRGLGHQVATDALTEMERAMARDGIETNDRQLACARINSTEGQNYLSAMSCAANYAWVNRSSMTFLCRQAFAKMFDSTPDDLDMHVVYDVSHNIAKIEEHMVDGKLKTLLVHRKGSTRAFPPHHPLIPVDYQYTGQPVMIGGTMGTCSYILTGTQKGMDETFGSTCHGAGRARSRNNSRNKLDYAEVLENLKTKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGISKKAVKLRPIAVVKG 507
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|1101400003|ref|XP_018911068.1| (PREDICTED: tRNA-splicing ligase RtcB homolog isoform X1 [Bemisia tabaci]) HSP 1 Score: 832.402 bits (2149), Expect = 0.000e+0 Identity = 392/505 (77.62%), Postives = 440/505 (87.13%), Query Frame = 0
Query: 6 VVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
VVR + EE+ +L + TP +RI KG PNM VEG FYVN LE+LMF EL+ G VGGFLP +KQIANVAALPGIVG+S+GLPDVHSGYGFAIGN+AAF D +++VSPGGVGFDINCGVRL+RTNL E+DV +E+L QS+FDHIPVGVGSKG+IP +A DLE ALEMGMDWSLREGY WAED EHCEE GRM ADP+KV MRAKKRGLPQLGTLGAGNHYAEIQVVEEI+D AA +MGI++ GQ+CVMIHSGSRG GHQVATDALV+ME+AM RD I TNDRQLACARI S EGQ+YL +M+AAANFAWVNRSSMTFL+RQAFAK F TPDDLDMHVIYDVSHNIAK EEHM G+P+TLLVHRKGSTRAFPP+HPLIPVDYQ TGQPVLIGGTMGTCSYVLTGT++G++ETFGSTCHGAGRA SR KSR+ L+YTEVL L+E+GISIRVASPKLVMEEAPESYK+VT VVDTCH AGIS+K+IKLRPIAV+KG
Sbjct: 2 VVRQYNEELKYLEKLTPYSWRIKKGFQPNMNVEGIFYVNNHLEKLMFDELRNACRPGMVGGFLPGMKQIANVAALPGIVGKSVGLPDVHSGYGFAIGNMAAFDANDPKSVVSPGGVGFDINCGVRLLRTNLFEKDVLPVKEQLAQSMFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYIWAEDKEHCEEYGRMLNADPSKVSMRAKKRGLPQLGTLGAGNHYAEIQVVEEIYDKWAADKMGIEEKGQICVMIHSGSRGFGHQVATDALVQMEKAMKRDNIETNDRQLACARIHSKEGQDYLKSMSAAANFAWVNRSSMTFLSRQAFAKQFNTTPDDLDMHVIYDVSHNIAKTEEHMVDGKPRTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMQETFGSTCHGAGRALSRAKSRRNLDYTEVLRKLDEQGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKSIKLRPIAVIKG 506
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|470308521|ref|XP_004363837.1| (hypothetical protein CAOG_02998 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0 Identity = 397/509 (78.00%), Postives = 446/509 (87.62%), Query Frame = 0
Query: 2 ANGSVVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
A ++R++E+E ++ R +PT+FRI KG V NMKV+G FYVN L+ELMF EL+Q + + GVGGFLPAVKQIANVAALPGIVGRSIGLPD+HSGYGFAIGN+AAF + D EAIVSPGGVGFDINCGVRLIRTNLTE++V +E+L Q+LFDHIPVGVGSKGVIP + +LE ALEMGMDWSLREGYAWAED EHCEE GRM QA+P V RAKKRGLPQLGTLGAGNHY EIQVV+EI+D AA +MGIDQ GQVC+M+HSGSRGLGHQVATD+LV ME+AM RDGI NDRQLACARIQS EGQ+YL MAAAAN+AWVNRSSMTFLTRQAFAK+F +TPDDLDMHVIYDVSHNIAKVEEHM TLLVHRKGSTRAFPP+HPLIPVDYQ GQPVLIGGTMGTCS+VLTGT+KG+ ETFGSTCHGAGRAQSRNKSR+TL+Y +VL +L +KGISIRVASPKLV EEAPESYKDV VV+TCH+AGIS+KAIKLRPIAV+KG
Sbjct: 11 AASGILRSYEDECKYIERVSPTQFRIKKGFVHNMKVDGCFYVNQHLQELMFDELQQFSDSRGVGGFLPAVKQIANVAALPGIVGRSIGLPDIHSGYGFAIGNMAAFDMNDPEAIVSPGGVGFDINCGVRLIRTNLTEKEVGPVKEELAQALFDHIPVGVGSKGVIPMTMHNLEEALEMGMDWSLREGYAWAEDKEHCEEYGRMLQANPAMVSQRAKKRGLPQLGTLGAGNHYCEIQVVDEIYDAHAARKMGIDQKGQVCIMVHSGSRGLGHQVATDSLVSMEKAMRRDGIEVNDRQLACARIQSKEGQHYLQGMAAAANYAWVNRSSMTFLTRQAFAKIFNSTPDDLDMHVIYDVSHNIAKVEEHMVD---VTLLVHRKGSTRAFPPHHPLIPVDYQLIGQPVLIGGTMGTCSFVLTGTEKGMLETFGSTCHGAGRAQSRNKSRRTLDYQDVLDSLAQKGISIRVASPKLVTEEAPESYKDVIDVVETCHQAGISKKAIKLRPIAVIKG 516
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|321455578|gb|EFX66707.1| (hypothetical protein DAPPUDRAFT_302483 [Daphnia pulex]) HSP 1 Score: 831.247 bits (2146), Expect = 0.000e+0 Identity = 394/505 (78.02%), Postives = 441/505 (87.33%), Query Frame = 0
Query: 6 VVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
+VRT+++EM FL R +P +RI KG VPNM VEG FYVN LE+LMF EL+ G VGGFLP +KQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAF + D +IVSPGGVGFDINCGVRL+RTNLTE+DV+ +E+LTQS+FDHIPVGVGSKGVIP +A DLE ALEMG+DWSLREGYAWAED EHCEE GRM ADP+KV +RAKKRGLPQLGTLGAGNHYAEIQVV+EI+D AA +MGI+ GQVC+MIHSGSRG GHQVATDAL M++AM RD I+TNDRQLACARI S EGQ+YL MAAAANFAWVNR+SMTFL RQAFAK F +TPDDLDMHVIYDVSHNIAKVE+H G+ KTLLVHRKGSTRAFPP+HPLIPVDYQ TGQPVLIGGTMGTCSY+LTGT++G+ ETFGSTCHGAGRA SR KSR+ L+YTEVL L+E+GISIRVASPKLVMEEAPESYK+VT VVDTCH AGIS+K +KLRPIAV+KG
Sbjct: 1 MVRTYDDEMKFLERLSPCSWRIKKGFVPNMNVEGIFYVNNNLEDLMFDELRNACAQGLVGGFLPGMKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFDMDDPNSIVSPGGVGFDINCGVRLLRTNLTEKDVQPFKEQLTQSMFDHIPVGVGSKGVIPITAQDLEEALEMGVDWSLREGYAWAEDKEHCEEFGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIYDKWAANKMGIEHKGQVCIMIHSGSRGFGHQVATDALNSMDKAMKRDKIVTNDRQLACARISSTEGQDYLKGMAAAANFAWVNRASMTFLCRQAFAKQFNSTPDDLDMHVIYDVSHNIAKVEQHTVDGKLKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYILTGTEQGMVETFGSTCHGAGRALSRAKSRRNLDYTEVLERLKEQGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 505
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|568250734|gb|ETN60385.1| (tRNA-splicing ligase RtcB like protein 1 [Anopheles darlingi]) HSP 1 Score: 830.091 bits (2143), Expect = 0.000e+0 Identity = 390/505 (77.23%), Postives = 436/505 (86.34%), Query Frame = 0
Query: 6 VVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
VVR + EEM ++ R +P F I KG PNM V+G FY N++LE+LMF EL+ G GGFLP VKQIANVAALPGIVGRS+GLPD+HSGYGFAIGN+AAF + D +IVSPGGVGFDINCGVRL+RTNL E+DV +E+L QSLFDHIPVGVGSKG+IP +A DLE ALEMGMDWSLREGY WAED EHCEE GRM ADP+KV +RAKKRGLPQLGTLGAGNHYAEIQVVEEI+D AA++MGI+++GQ+CVMIHSGSRG GHQVATDALVEME+AM RD I TNDRQLACARI SPEGQNYL AM+AAANFAWVNRSSMTFLTRQAFAK F TPDDLDMHVIYDVSHN+AK+EEHM GRPK LLVHRKGSTRAFPP+HPLIPVDYQ TGQPVL+GG+MGTCS+VLTGT+KG+ ETFGSTCHGAGR+ SR KSR+ L+Y +VL LEEKGISIRVASPKLV EEAP+SYKDV VV TCH+ GIS KAIKLRPIAV+KG
Sbjct: 2 VVREYNEEMKYIERLSPNSFLIKKGFQPNMNVDGVFYANSRLEKLMFEELRNACRPGMSGGFLPGVKQIANVAALPGIVGRSVGLPDIHSGYGFAIGNMAAFDMNDPTSIVSPGGVGFDINCGVRLLRTNLFEKDVTPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWSLREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVEEIYDKYAASKMGIEELGQICVMIHSGSRGFGHQVATDALVEMEKAMKRDKIETNDRQLACARINSPEGQNYLKAMSAAANFAWVNRSSMTFLTRQAFAKQFNTTPDDLDMHVIYDVSHNVAKMEEHMVDGRPKQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGSMGTCSFVLTGTEKGMVETFGSTCHGAGRSLSRAKSRRQLDYKDVLRDLEEKGISIRVASPKLVQEEAPDSYKDVRDVVQTCHDVGISNKAIKLRPIAVIKG 506
BLAST of EWM25480.1 vs. NCBI_GenBank
Match: gi|1080061659|ref|XP_018572837.1| (PREDICTED: tRNA-splicing ligase RtcB homolog [Anoplophora glabripennis]) HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0 Identity = 395/505 (78.22%), Postives = 439/505 (86.93%), Query Frame = 0
Query: 6 VVRTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510
VVR ++EE+ +L + +P +RI KG PNMKVEG FYVN +LE+LM EL+ G VGGFLP VKQIANVAALPGIVGRS+GLPDVHSGYGFAIGN+AAF + + ++IVSPGGVGFDINCGVRL+RTNL E+DV +E+L QSLFDHIPVGVGSKG+IP +A DLE ALEMGMDWSLREGY WAED EHCEE GRM ADP KV MRAKKRGLPQLGTLGAGNHYAEIQVVEEI+D AA +MGI++IGQVCVMIHSGSRG GHQVATDALV+ME+AM RD I TNDRQLACARI S EGQ+YL +MAAAANFAWVNRSSMTFL+RQAFAK F +PDDLDMHVIYDVSHNIAKVEEH+ G+P TLLVHRKGSTRAFPP+HPLIPVDYQ TGQPVLIGGTMGTCSYVLTGT++G+ ETFGSTCHGAGRA SR KSR+ L+YT+VL LE GISIRVASPKLVMEEAPESYK+VT VVDTCH AGIS+K IKLRPIAV+KG
Sbjct: 2 VVRQYQEELQYLEKLSPYCWRIKKGFQPNMKVEGVFYVNQRLEKLMLDELRNACRPGMVGGFLPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDINNPDSIVSPGGVGFDINCGVRLLRTNLFEQDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNAKDLEEALEMGMDWSLREGYIWAEDKEHCEEYGRMLNADPAKVSMRAKKRGLPQLGTLGAGNHYAEIQVVEEIYDKWAACKMGIEEIGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDNIETNDRQLACARINSVEGQDYLKSMAAAANFAWVNRSSMTFLSRQAFAKQFHMSPDDLDMHVIYDVSHNIAKVEEHIVDGKPTTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMLETFGSTCHGAGRALSRAKSRRNLDYTDVLRKLEYMGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKCIKLRPIAVIKG 506 The following BLAST results are available for this feature:
BLAST of EWM25480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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