EWM25507.1, cds5172 (CDS) Nannochloropsis gaditana

Overview
NameEWM25507.1
Unique Namecds5172
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:360513..361046 +
Alignment locationCM002465.1:361190..361717 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25507.1
ProductSerine hydrolase FSH
Orig transcript idgnl|cribi|Naga_100032g39.250.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:360513..361046 +
CM002465.1supercontigCM002465.1:361190..361717 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR005645Serine_hydrolase_FSH
IPR029058AB_hydrolase
Homology
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|585107273|gb|EWM25507.1| (Serine hydrolase FSH [Nannochloropsis gaditana])

HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query:    1 MHRDGARPGPSWTSPAHTLLSHPRIHASAPSPPPGRPCMPERKAVVPFCFLSASLAISSALPPLASAVRAFFVSPAPTASSSPSVIVSSVPPDSRICMSAAFPVASSPLTPASSTAPSPDQRSRRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLNAWTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAPDGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRFTSGEGIKGR 353
            MHRDGARPGPSWTSPAHTLLSHPRIHASAPSPPPGRPCMPERKAVVPFCFLSASLAISSALPPLASAVRAFFVSPAPTASSSPSVIVSSVPPDSRICMSAAFPVASSPLTPASSTAPSPDQRSRRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLNAWTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAPDGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRFTSGEGIKGR
Sbjct:    1 MHRDGARPGPSWTSPAHTLLSHPRIHASAPSPPPGRPCMPERKAVVPFCFLSASLAISSALPPLASAVRAFFVSPAPTASSSPSVIVSSVPPDSRICMSAAFPVASSPLTPASSTAPSPDQRSRRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLNAWTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAPDGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRFTSGEGIKGR 353          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|545355151|ref|XP_005643393.1| (alpha/beta-hydrolase [Coccomyxa subellipsoidea C-169] >gi|384245355|gb|EIE18849.1| alpha/beta-hydrolase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 182.185 bits (461), Expect = 2.411e-52
Identity = 108/236 (45.76%), Postives = 139/236 (58.90%), Query Frame = 0
Query:  116 APSPDQRSRRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLNAWTDQTPEG-------SLQPRPSKALHYTGVAETTIPFLKQALAEHAPDGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRF 344
            A  P+   R+L+ILCLHGYLQ+A +FRG++GSLRKGLKS+A+F F+DAP LAQ   +E      T   P         +   RPSKA  Y+G  + +   L+  L E   DG+L FSQGATAAA+ LA          G K+     KFAILV GF PRD +  + +KEG   LPT+FV G+AD+LV   R  EL   + E   G  T+ EH G HFVPT  G  K+ +V F+D+F
Sbjct:    2 AAEPNSSGRKLRILCLHGYLQNAEVFRGRIGSLRKGLKSRAEFFFVDAPHLAQGEEAEIRAAGGTGDHPRAWWTWEDLNETKRPSKAAKYSGW-KASADVLESVLKEQQYDGILGFSQGATAAALFLA----------GHKDSTPALKFAILVSGFLPRDPSYAEILKEGQVSLPTLFVHGSADELVLPERGLELQETFAE---GSYTVLEHPGAHFVPTCTGAVKQQIVHFLDKF 223          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|926769812|ref|XP_013893380.1| (hypothetical protein MNEG_13602 [Monoraphidium neglectum] >gi|761960768|gb|KIY94360.1| hypothetical protein MNEG_13602 [Monoraphidium neglectum])

HSP 1 Score: 158.688 bits (400), Expect = 9.016e-43
Identity = 96/236 (40.68%), Postives = 129/236 (54.66%), Query Frame = 0
Query:  121 QRSRRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLN------------AWTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAPDGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRF 344
            Q   +LK+LCLHG++Q+A  FR ++GS+RK LKS+ +F FLDAPFLA    S + +              W D  P      RPS++  Y    +T +  +   L  HAPDG+L FSQGATA A+LLA L+R  R+ +G    V  P+FA+LV GF PRD    + +       P++FV G AD LVP  RT  LM  +D       +L  H G H VPT  G+ K  +  F+D F
Sbjct:   13 QGGGKLKVLCLHGFMQTADAFRMRVGSMRKALKSRVEFEFLDAPFLAGDHLSAEQIAELGGSASGRTWIKWADMAP----GKRPSQSTAYIDFDQTYLHMV-DGLRAHAPDGVLGFSQGATAVALLLAQLKR--RQDRGLDLDVPAPRFAVLVAGFLPRDPTYSELLAAERVTTPSLFVVGEADALVPPERTLALMDTFDPQS---TSLLRHAGAHMVPTCSGDVKRQMAEFLDGF 238          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|760444215|ref|XP_011399176.1| (hypothetical protein F751_4773 [Auxenochlorella protothecoides] >gi|675353840|gb|KFM26280.1| hypothetical protein F751_4773 [Auxenochlorella protothecoides])

HSP 1 Score: 132.88 bits (333), Expect = 2.156e-33
Identity = 92/225 (40.89%), Postives = 121/225 (53.78%), Query Frame = 0
Query:  125 RLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLNAWTDQ------TPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAP-DGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVD 342
            +L++LCLHGY Q+A IFR + GS RK LKS+ +FV++DAP  A+         +W D          GS Q RPS A+ Y+G   +    L +ALA HAP  G+L FSQGATAAAI  A L           EG    +FA+LV GF PRD AV   +      LP++ + G AD+++PL R+  L   +     G    H H G H VPT  G  KE  + F+D
Sbjct:   14 KLRVLCLHGYAQTADIFRTRTGSGRKSLKSRLEFVYVDAPHDAKTTG-----KSWFDWEELPAGNQLGSDQARPSSAVRYSGWGASRRT-LDEALAAHAPVHGILGFSQGATAAAIYCAGL----------PEGAL--RFAVLVSGFLPRDPAVAASLAGPGLALPSLHLMGEADEIIPLDRSEALAQTF----SGPRMAHRHPGRHLVPTCSGAVKEAWLAFLD 216          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|159482649|ref|XP_001699380.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158272831|gb|EDO98626.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 123.25 bits (308), Expect = 1.906e-29
Identity = 87/218 (39.91%), Postives = 104/218 (47.71%), Query Frame = 0
Query:  125 RLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARP-SEDLLNA-----------WTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAPDGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAP--RLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPT 328
            +LK+LCLHGY+Q+A IFR +LGS RK LKS+ +FVF+DAP+ AQ  P SED               WTD  P G    RPSKA HYTG  E +   L  A+ EH+PDG                                           F PRD AV   V+ G P   +P +FV G +D LVP  RT EL AC+  A     T   HGG H VPT
Sbjct:   69 KLKLLCLHGYMQNAEIFRSRLGSARKALKSRVEFVFVDAPYEAQGLPGSEDPEEVQGGRDGRSWWQWTDTGPSG----RPSKAAHYTGW-EVSQAALVAAIKEHSPDG-------------------------------------------FLPRDPAVAALVQAGGPGVGVPVLFVSGTSDSLVPPERTAELRACFPPAVCSTFT---HGGAHLVPT 235          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|909132691|gb|KNE59161.1| (hypothetical protein AMAG_03487 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 117.087 bits (292), Expect = 1.396e-26
Identity = 87/247 (35.22%), Postives = 125/247 (50.61%), Query Frame = 0
Query:  113 SSTAPSPDQRSRRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAP-----FLAQARPSEDLLNAWTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAP-DGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLP-KFAILVGGFFPRDEAVGQGVKEGAP----RLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRFTSGE 348
            S+  P+P   ++RL+ILCLHGY Q+AS+F  +  +LRK  K +ADFV++ AP     F      +EDL +   D+ P    +          G  E +   LK  L    P DG++ FSQGA  AA+L  A++       G       P +FAIL  GF  RD  +       AP     +PT+ + GAAD+ VP  R+R+L A +  A      ++EH GGHF+PT K   +  +  F+D   +GE
Sbjct:   55 SNMTPTPGS-AQRLRILCLHGYTQNASVFSKRTAALRKSFKKRADFVYVTAPLYTADFDTTGADAEDLADV-GDEGPRAWFRREEQPVFREWGYDE-SFSLLKSVLETQGPFDGVVGFSQGANMAALL--AMRMHPNAPNGPLTTAHPPFRFAILSSGFVSRDPDLAPLFH--APVAPWSIPTLHIWGAADEWVPADRSRDLAAAFANA-----VVYEHAGGHFLPT-KAPDRAVIAEFLDLVVNGE 288          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|391348083|ref|XP_003748281.1| (PREDICTED: esterase OVCA2-like [Galendromus occidentalis])

HSP 1 Score: 110.923 bits (276), Expect = 2.763e-25
Identity = 77/227 (33.92%), Postives = 114/227 (50.22%), Query Frame = 0
Query:  124 RRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLNAW----TDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAP-DGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRFT 345
            R+LKILCLHGY Q A  FR KLGSLRK  KS A++VF+ AP L      E     W    +D++ +   Q   S  L      E+ +  +   + +  P DG+L FSQGA+  A++L    +      G  + +   +FAIL  GF  R+     G   G   LP + V G  D+++PL +       + +     + + EH GGHF+P+  G  K DV+ F+ +F+
Sbjct:    5 RKLKILCLHGYRQDAESFRSKLGSLRKSTKSLAEYVFVTAPLLVNDNERE---RGWWFSRSDRSFDAQEQSDVSIGL------ESALELVSNTVEKEGPFDGILGFSQGASFVALVLQLGNKI----WGDFDQIRF-RFAILFSGFESRNSKHAFG---GKIDLPALHVIGKTDKVIPLEQASAFNELFSD-----VQISEHEGGHFIPS-SGNSKRDVIEFMKKFS 208          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|768191071|gb|KJH47300.1| (serine hydrolase [Dictyocaulus viviparus])

HSP 1 Score: 107.071 bits (266), Expect = 8.620e-24
Identity = 73/223 (32.74%), Postives = 116/223 (52.02%), Query Frame = 0
Query:  125 RLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPS--EDLLNAWTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAP-DGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVRFVDRF 344
            RL+ILCLHGY Q++ +FR K GSLRK L+  A+F F+ AP +  +     ED    W  +  +     +    +  TG  E ++ F+ + + ++ P DG+L FSQGA+ A +LL   +R E        G+   +FAIL  GF     +V          +PT+ + G  DQ+V  T + +LM  + +      T+  H GGH++P+   E+K   + F++RF
Sbjct:    7 RLRILCLHGYRQNSVLFREKTGSLRKQLRKYAEFEFISAPLVTNSTSEVREDARGWWFSR-EDNDFSSKDVCCIA-TGF-EKSVSFICKYVCDYGPFDGILGFSQGASMAHLLLVMEKRGEIH-----LGI---RFAILFSGFLSL-SSVHSRYTSITCDIPTLHIYGTGDQIVLSTVSEKLMTMFSDN-----TVIVHKGGHYIPSLT-EYKNVFITFLNRF 211          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|350417091|ref|XP_003491252.1| (PREDICTED: ovarian cancer-associated gene 2 protein homolog [Bombus impatiens])

HSP 1 Score: 104.375 bits (259), Expect = 9.457e-23
Identity = 74/228 (32.46%), Postives = 117/228 (51.32%), Query Frame = 0
Query:  120 DQRSRRLKILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQARPSEDLLNAWTDQTPEG---SLQPRPSKALHYTGVA---ETTIPFLKQALAEHAP-DGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLPKFAILVGGFFPRDEAVGQGV-KEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPTWKGEFKEDVVR 339
            D  + +L+IL +HGY QS  IF+ KLGSLRKG K + DF FL AP      P     N  T++   G   + +    KA+  + +A   E +I  +K+A  +  P DG+L FSQGA  A +L    Q++  + K +        FAI++ GF  +   +  G+  +G   +P++ + G  DQ++P     E+   +    K  IT   H GGH++P+ K  +KE ++ 
Sbjct:    2 DNSTTKLRILAIHGYAQSDVIFKTKLGSLRKGFKKEVDFTFLRAP---HKVPMRSNFNIDTEEDAYGWWFNTKDHIFKAVVPSNLAVGFEESIVVIKEAFQKFGPFDGILGFSQGAAFATLLCFMQQKNLLQIKFE--------FAIIISGF--KSLCIPHGIYYDGKISIPSLHIYGKTDQVIPTEMAEEVSEMF--INKTNIT---HEGGHYIPSKKEYYKEFIME 211          
BLAST of EWM25507.1 vs. NCBI_GenBank
Match: gi|1018891685|dbj|GAT48770.1| (predicted protein [Mycena chlorophos])

HSP 1 Score: 104.375 bits (259), Expect = 2.031e-22
Identity = 80/217 (36.87%), Postives = 109/217 (50.23%), Query Frame = 0
Query:  128 ILCLHGYLQSASIFRGKLGSLRKGLKSKADFVFLDAPFLAQ-----ARPSEDLLNAWTDQTPEGSLQPRPSKALHYTGVAETTIPFLKQALAEHAPDGLLAFSQGATAAAILLAALQRDEREGKGQKEGVSLP---KFAILVGGFFPRDEAVGQGVKEGAPRLPTMFVGGAADQLVPLTRTRELMACWDEAEKGWITLHEHGGGHFVPT---WKGEF 333
            IL LHG+ Q+ASIF  +LG+LRK   +  +FVF+DAP + Q        S + L+A T    E     R ++  +       +I FL+  L     DG+L FSQGAT A  L A L+R E       +G +     KF + V GF  R  A+G+ V     R PT+ V G  D +V   R+R L+A  D A      + EH GGHFVP+   W+  F
Sbjct:    8 ILALHGFSQNASIFSKRLGALRKQCGNSVEFVFVDAPMILQPVDLAGFASTEALDA-TGAGSESRAWFRWNETKNEAVGLPDSIAFLRDVLKSRHFDGVLGFSQGATVAGFLAALLERPEAYPDFMVDGKAPHPPFKFCVAVSGFRMRG-AIGEAVFASNYRTPTLHVIGHNDVVVIEERSRTLIAVSDNAR-----VEEHDGGHFVPSKTNWRKFF 217          
The following BLAST results are available for this feature:
BLAST of EWM25507.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107273|gb|EWM25507.1|0.000e+0100.00Serine hydrolase FSH [Nannochloropsis gaditana][more]
gi|545355151|ref|XP_005643393.1|2.411e-5245.76alpha/beta-hydrolase [Coccomyxa subellipsoidea C-1... [more]
gi|926769812|ref|XP_013893380.1|9.016e-4340.68hypothetical protein MNEG_13602 [Monoraphidium neg... [more]
gi|760444215|ref|XP_011399176.1|2.156e-3340.89hypothetical protein F751_4773 [Auxenochlorella pr... [more]
gi|159482649|ref|XP_001699380.1|1.906e-2939.91predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
gi|909132691|gb|KNE59161.1|1.396e-2635.22hypothetical protein AMAG_03487 [Allomyces macrogy... [more]
gi|391348083|ref|XP_003748281.1|2.763e-2533.92PREDICTED: esterase OVCA2-like [Galendromus occide... [more]
gi|768191071|gb|KJH47300.1|8.620e-2432.74serine hydrolase [Dictyocaulus viviparus][more]
gi|350417091|ref|XP_003491252.1|9.457e-2332.46PREDICTED: ovarian cancer-associated gene 2 protei... [more]
gi|1018891685|dbj|GAT48770.1|2.031e-2236.87predicted protein [Mycena chlorophos][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5184rna5184Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications