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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100032g38.264.mrna |
| Orig protein id | gnl|cribi|Naga_100032g38.264 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:358429..359791 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5183 ID=rna5183|Name=rna5183|organism=Nannochloropsis gaditana|type=mRNA|length=2090bp
TCTTCCCCTCGAAGGGGATCAAGCGCTGTCTCTTCTCGCCGGGAGAGAGG
ACTCTGCTTGCGAGAGAGGCACTAGTAGCAGACCACCACACCGAAACTTG
TGTTCTTTGTGCGGCCCGCTCGACCCAGCTGTGTACCCACATGCAGCCAT
CGTTTTGAAATAGGCGTGTGGATGCTGCCGCATATGTGAGCCTGGAGGCG
TGTTTTGTCTTGATTGAAACCGCCGGATGAAATTGACTCCTTGCACTGCC
TTTTGGGCTCATCCCCGGAACAGAACATGATGGAGGAGAATCCGTCCATG
GCAAATGGTGGGATTAACCCCACCACACCCACGCGTCGACCGTATCGAAG
GGCGCGAGCAGCGCCTTTCCTACCGGCGTCGGATGGCGAGATGCTTTACG
GCAGTGACAGAGGCATTGGGAGGGCGGAACAGCGAGGACGCCGGCGTCAA
GTGCAGGGGGTGGGAAACGAAAGGGAGGAAGAGGACGAGGAAATGGTGGG
CGACGTGGAATGGTTACTTGACACCAGGAGATGGACTCCAATAGGCGCGG
AGATTGATTATACTGCCTTTCATCGACTGAGTTTCCGAGACAAGCTCCGC
ACTCTGGTCTGGGTTCACAAGACACGCCTCCTGGGCCGCTACAAAATCTT
CCACAATTACATCGAGCGCTGCCCCTGCCGACCCTGCTCTCCTCTCAGTC
GTTCCTACGCCCGTTCCTACTCGCGCGCTCTCACCAGCATCGGGCCTCGA
CCATGCCTCCGGGCGCCACTCTCCCTCTTGGGTCTTCAGGGACTCTTTAT
CCGGACCCCTCCTTCCGCCGACGCCTGGAGGTCAGCGGCGGACATTTTGG
ACGGAGGCGGGGGGGAAGGGCGGAGGGGGGGGAGGGGCGGAGACGACAGA
TCGAACGCTTACCTTGTCGAGATTTTCCGGCTCCAACCTTACGCGGCGGC
GGCCTACCTGCGGGCGCTACTGTACTGTTGGATTGGTGGCGTCATGCTTC
AACTTGAAGCAGCCGCCTCTTTTGGCTCGGGCGGGGACACATTTTACGAG
CGCACCGCCTGGCATTGGCTGTGTCTGCAGCTAGTCTTGCAGTTGTTGCA
AGCCCCGGCTCGATGCAAGCTCTGGCGGCGGCTGGTACGCGTCTCCCACG
CCCCCGAGGCGGACCAGGCGGCCGAACAGATCCGGCGATTGGTTCGAAGC
CATTTATGGATGTGCAGCCAGGCCTTGGGCACGCTTTTCCACGTGGTGGC
CGCCTTTGGGCCCTTGTTTTTGTACATGCTGGCGCCCGCCAGCCCCGTGC
GCCGGAGCGTCCTGGCCGCCTGTTGTGGGAATCTTCTTGTGTTCATTGTC
CGCTCCGCCTTGACGTTCCTCGTCGTGCACTCCATCATGGAGGCCCGAAA
CAGCAACGAAGGGGGAGACGGGGGGAGAGAAGGGCCAAGGAAGGGTCTGA
GACGGGGGTTGTCCCGGAACAGTCTGGCCAAGCTGCGTCGGCGAGACTCG
AACGCAGAGGACGTGATGGGTGCGAACCACTGCGCCATCTGCCTCGCCTT
TTTCCAGGAAGGGGAAACCCTCTTGTGTTTGCCCTGCCATGAGCGCCACG
TGTACCACACAGGCTGCATCGAGAGATGGCTTAAGAAGAACAGATCATGC
CCCTTGTGCATGGCCGACATCACCTCTCCTGCATTGGTAGCGGCGCTGGC
AGCGGTAGCAGCGGAGGTGAATGTCGTGAAAGGGGGCGGGCAGGAGCAAG
GAGAAAGTGGTGAGGAATTGGCAGGACGGCAAGGGGAAGGCGGCGAGGCA
TGGGCAGGACGGCAAGGAGGTGGAATAGGCGGGCATGTACAGGAAGAGCT
GCAAGCTTGATGTGGAAAGATTCCAGATTTTGCGGTGATTGTTAAAGACG
ACGGCCGAGAGCGAATTTATGCGCGTTCGCACATTTTGTCCATTTTTGAC
ATGTTGTACAAGATCCGGTGGACTTCGAAAACGAGATAGGACGTGCAGTT
TGATTGTAGGCCAAGGGATCACGGATAGGGAGGACTATCCTTTAGGGTTT
TTTTCCAGAATAGAACGGAATGCTTTTTCATCCATTCCAA back to topprotein sequence of rna5183 >rna5183-protein ID=rna5183-protein|Name=rna5183|organism=Nannochloropsis gaditana|type=polypeptide|length=307bp
MATASFPLVTLEALGRHLSKLRAATTSLPPAPLTSLQWTASPALQDALKL
LTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLV
GPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPE
GVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFR
EMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEEAFWGENGGGA
MREWEKENLSRCLVPLGHCGEMVKGFLEAVEEVAMEGGGRERRREGNTQE
KVVGWGS back to topmRNA from alignment at CM002465.1:358429..359791+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5183 ID=rna5183|Name=rna5183|organism=Nannochloropsis gaditana|type=mRNA|length=1363bp|location=Sequence derived from alignment at CM002465.1:358429..359791+ (Nannochloropsis gaditana)
ATGGCGACCGCAAGTTTCCCGCTTGTTACCTTAGAGGCCCTTGGGCGGCA
CCTCTCCAAATTGCGGGTAAGTGCTTCTTTTAGATGCCATGTCCTGTTAT
GACACTTTTCGTGATTACGATTTTTTTTACTCTCCAATGTATGGGATTTT
CCCttaatttttttaaattcATTTATGCCATAATGAATCGTGGCTCAGCG
GACCAATGTAGCGGCTTGCAGACAGGGTTTGTTCCGTATGTTCCTTCGAT
CGCCCtacccctttcctttctctgtgCCCAAAggctccttgctccctcct
cgggcaTCACGCATGCAAGGACAATATAGTTCTATACATAACCCCACTGT
TGGGGCACGTGAGTGGGCGATACGACCACCACTCCCTCAGACGCTGGGGG
GCGCAtacctccccacctcgctctcccccgcctctccgcACGACAAGCAC
GTTCTCGGACGCGAGGACTCACTCCTCGACCATCTTCTACCCTCTGTGTG
AACAGGCAGCTACgacaagcctccctcccgcccccctcacATCGCTGCAA
TGGACAGCCTCCCCCGCTTTGCAGGATGCCCTGAAGCTTCTCACGGATTC
GGGAGACCGTGTGCGTGACACGGCCACGAAATTCAGCCTCGtgctcacca
ccaccaccagcggGCCGGGGATCAAGTCCATCTGCGACGAGATGCGCCAG
AGCTGTGACTCTCTTCTCGCCGCTTTGGCCCTTCTGGTCGGCCCAGCGAT
AGGCGCCGGGGGCCCTCTCATGGAGTTGTACTGCCAGCAAGTGCGCAGCA
TTTTGCGAGCTATTGAGGAGCTCCTGCGGCACATCGCCTCCCCCGACTCC
AAACTTCTCTCTGCACCTCGGCCCTTGCGTTCTCCTGAGGGCGTCAAGGA
TGAACTGGCCCCAAAGACGGGCGTGGTCTGGCAGCAGTGCGAGGAGCTGA
AAAAACTGCCGCGGAGCAACCGGGTTGCATACAGACGAGCCTTCTTGACG
CACCAATCGGCGGTAAAGGACACGCTTAGGGAGTTTCGGGAaatgctggc
ggaggcggaggacgatgctgggacggagagcgaggaagaggacgatgagg
aggaggagggggaggagggaggattggcAGGGGAGATGGCGGATTTGGAA
CTGGAAGAGGCCTTTTGGGGGGAAAACGGGGGAGGCGCGATgagggaatg
ggagaaggagaatctGAGTCGGTGTCTGGTCCCTCTCGGGCATTGCGGAG
AGATGGTGAAGGGATtcttggaggcggtggaggaggtggcgatggaaggg
ggggggagggagaggcggagggagggcaataCGCAAGAGAAAGTGGTTGG
ATGGGGATCATAA back to topCoding sequence (CDS) from alignment at CM002465.1:358429..359791+ >rna5183 ID=rna5183|Name=rna5183|organism=Nannochloropsis gaditana|type=CDS|length=1848bp|location=Sequence derived from alignment at CM002465.1:358429..359791+ (Nannochloropsis gaditana)
ATGGCGACCGCAAGTTTCCCGCTTGTTACCTTAGAGGCCCTTGGGCGGCA
CCTCTCCAAATTGCGGGCAGCTACgacaagcctccctcccgcccccctca
cATCGCTGCAATGGACAGCCTCCCCCGCTTTGCAGGATGCCCTGAAGCTT
CTCACGGATTCGGGAGACCGTGTGCGTGACACGGCCACGAAATTCAGCCT
CGtgctcaccaccaccaccagcggGCCGGGGATCAAGTCCATCTGCGACG
AGATGCGCCAGAGCTGTGACTCTCTTCTCGCCGCTTTGGCCCTTCTGGTC
GGCCCAGCGATAGGCGCCGGGGGCCCTCTCATGGAGTTGTACTGCCAGCA
AGTGCGCAGCATTTTGCGAGCTATTGAGGAGCTCCTGCGGCACATCGCCT
CCCCCGACTCCAAACTTCTCTCTGCACCTCGGCCCTTGCGTTCTCCTGAG
GGCGTCAAGGATGAACTGGCCCCAAAGACGGGCGTGGTCTGGCAGCAGTG
CGAGGAGCTGAAAAAACTGCCGCGGAGCAACCGGGTTGCATACAGACGAG
CCTTCTTGACGCACCAATCGGCGGTAAAGGACACGCTTAGGGAGTTTCGG
GAaatgctggcggaggcggaggacgatgctgggacggagagcgaggaaga
ggacgatgaggaggaggagggggaggagggaggattggcAGGGGAGATGG
CGGATTTGGAACTGGAAGAGGCCTTTTGGGGGGAAAACGGGGGAGGCGCG
ATgagggaatgggagaaggagaatctGAGTCGGTGTCTGGTCCCTCTCGG
GCATTGCGGAGAGATGGTGAAGGGATtcttggaggcggtggaggaggtgg
cgatggaagggggggggagggagaggcggagggagggcaataCGCAAGAG
AAAGTGGTTGGATGGGGATCATAAATGGCGACCGCAAGTTTCCCGCTTGT
TACCTTAGAGGCCCTTGGGCGGCACCTCTCCAAATTGCGGGCAGCTACga
caagcctccctcccgcccccctcacATCGCTGCAATGGACAGCCTCCCCC
GCTTTGCAGGATGCCCTGAAGCTTCTCACGGATTCGGGAGACCGTGTGCG
TGACACGGCCACGAAATTCAGCCTCGtgctcaccaccaccaccagcggGC
CGGGGATCAAGTCCATCTGCGACGAGATGCGCCAGAGCTGTGACTCTCTT
CTCGCCGCTTTGGCCCTTCTGGTCGGCCCAGCGATAGGCGCCGGGGGCCC
TCTCATGGAGTTGTACTGCCAGCAAGTGCGCAGCATTTTGCGAGCTATTG
AGGAGCTCCTGCGGCACATCGCCTCCCCCGACTCCAAACTTCTCTCTGCA
CCTCGGCCCTTGCGTTCTCCTGAGGGCGTCAAGGATGAACTGGCCCCAAA
GACGGGCGTGGTCTGGCAGCAGTGCGAGGAGCTGAAAAAACTGCCGCGGA
GCAACCGGGTTGCATACAGACGAGCCTTCTTGACGCACCAATCGGCGGTA
AAGGACACGCTTAGGGAGTTTCGGGAaatgctggcggaggcggaggacga
tgctgggacggagagcgaggaagaggacgatgaggaggaggagggggagg
agggaggattggcAGGGGAGATGGCGGATTTGGAACTGGAAGAGGCCTTT
TGGGGGGAAAACGGGGGAGGCGCGATgagggaatgggagaaggagaatct
GAGTCGGTGTCTGGTCCCTCTCGGGCATTGCGGAGAGATGGTGAAGGGAT
tcttggaggcggtggaggaggtggcgatggaagggggggggagggagagg
cggagggagggcaataCGCAAGAGAAAGTGGTTGGATGGGGATCATAA back to top
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