EWM25521.1, cds5171 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|585107287|gb|EWM25521.1| (hypothetical protein Naga_100032g38 [Nannochloropsis gaditana]) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
Query: 1 MATASFPLVTLEALGRHLSKLRAATTSLPPAPLTSLQWTASPALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEEAFWGENGGGAMREWEKENLSRCLVPLGHCGEMVKGFLEAVEEVAMEGGGRERRREGNTQEKVVGWGS 307
MATASFPLVTLEALGRHLSKLRAATTSLPPAPLTSLQWTASPALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEEAFWGENGGGAMREWEKENLSRCLVPLGHCGEMVKGFLEAVEEVAMEGGGRERRREGNTQEKVVGWGS
Sbjct: 1 MATASFPLVTLEALGRHLSKLRAATTSLPPAPLTSLQWTASPALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEEAFWGENGGGAMREWEKENLSRCLVPLGHCGEMVKGFLEAVEEVAMEGGGRERRREGNTQEKVVGWGS 307
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|672162177|ref|XP_008800922.1| (PREDICTED: uncharacterized protein LOC103715161 [Phoenix dactylifera]) HSP 1 Score: 80.1073 bits (196), Expect = 1.973e-13 Identity = 65/224 (29.02%), Postives = 102/224 (45.54%), Query Frame = 0
Query: 10 TLEALGRHLSKLRAATTSLPPAPLTSLQWTASPALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRH-IASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDD---AGTESEEEDDEEEEGEEGGL 229
LE+ R + ++ PP+ L + W+ +T GD + AT ++ + T P +K++ + M C+ L + L G +GAG L C + ++ LLR ++S DS+ S+ + L P+ +G+VW+ C+ LKK P +N A RA +VKD LRE E+ A DD GT E D ++ EEGGL
Sbjct: 13 VLESHVRSIQEIFQMLEEPPPSSLDKVAWSQ----------VTKLGDEISKQATVAGMLWSGET--PDVKALEENMGAYCNLLHGFILLCHGSTVGAGPTLHASICASAKQVIDCSISLLREAVSSCDSR--SSNKSLSIPK--------LSGLVWEACDALKKTPTTNCTAIGRAMAQVAVSVKDVLRELGELKPAASDDDSADGTSGEAADKPQDSDEEGGL 214
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|298706549|emb|CBJ29519.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.1073 bits (196), Expect = 2.770e-13 Identity = 62/225 (27.56%), Postives = 105/225 (46.67%), Query Frame = 0
Query: 11 LEALGRHLSKLRAATTSLPPAPLTSLQWTASPALQD-ALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMA 234
LE LG+ + L + + W+ + D AL+++ + + D T+ +LV S +S+ EM C ++A+L LL ++GA ++ + VR++L ++++L+ LL R R L TG VWQ C+EL++ P++N++A RR + AVKDT+ EF E A +S E G++GGL + A
Sbjct: 11 LEGLGKEIDTLIGHSKHGKGDTFSPTCWSKNSEDVDVALRVIGAASQSIHDGVTRLNLVYKANPSEVASESMSREMGGFCQQMVASLTLL--SSVGASKSMVAYFSAGVRAVLHSLKDLI-------GALLDPSRHAR--------LNGLTGTVWQSCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEFVEAAKAAAMANAGKS------ESAGDKGGLDEQFA 212
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|698784943|ref|XP_009825515.1| (hypothetical protein H257_03220 [Aphanomyces astaci] >gi|574120018|gb|ETV85497.1| hypothetical protein H257_03220 [Aphanomyces astaci]) HSP 1 Score: 74.7146 bits (182), Expect = 1.833e-11 Identity = 70/270 (25.93%), Postives = 109/270 (40.37%), Query Frame = 0
Query: 38 WTASPALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEEAFWGENGGGAMREWEKENLSRCLVPLGHCGEMVKGFLEAVEEVAMEGGGRERRREGNTQEKVVGWGS 307
W + +L +G + T TKFSLVL T S+C M Q C+ LLAAL + V GAG L + C V I + +L S L R PE TG +W C L+ L +SN ++ +R L + + DT++E + +A A+D ++ D E+ ++ELE+ + G + E L C+ L + K + ++ V+ E + Q+ V WGS
Sbjct: 64 WQQNSDFNLGRDVLIAAGGSISSTVTKFSLVLGKETVASDAYSVCHTMFQPCEQLLAALKVAVFA--GAGYALTKELCASVHRIFANVLDL--------STRLHVKDLGRVPE--------LTGRIWDACAALETLSKSNLISTKRVMLQTVAVLNDTVQELQGDVAAAKDALDNTIDDHDHLEQR-----------NVELEDDLDFDMGSQTLTANELRQLQACVDVLQMAQAIAKKGVLSLNAVS----------ETDGQDGCVQWGS 294
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|922407830|ref|XP_013470107.1| (Grap2/cyclin-D-interacting protein [Medicago truncatula] >gi|657405689|gb|KEH44145.1| Grap2/cyclin-D-interacting protein [Medicago truncatula]) HSP 1 Score: 73.1738 bits (178), Expect = 6.023e-11 Identity = 63/217 (29.03%), Postives = 94/217 (43.32%), Query Frame = 0
Query: 13 ALGRHLSKLRAATTSLPPAPLTSLQWTASPALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDD-AGTESEEEDDEEEEGEEGG 228
LG HL+ + L P +S + +D +K+ ++V AT ++ T P K+I + M ++L L + G +GAG L + V+ ++ + L++ S + R EG K + G VW+ C LKK P SN A R +VKD LRE +E+ + DD A TESE DD EGE G
Sbjct: 40 VLGSHLATIHETLQVLDQTPSSSSSFVNKVTWEDVIKM----AEQVSKQATTVGMIWTG--DKPESKAIEETMTSYFNNLQGFLLVSHGSKVGAGPTLSSSIHESVKQVVDSSFRLMKETVS----FYGSHR-----EGQKQLVPQLVGTVWEACSALKKTPTSNITAIGRGMTKVAVSVKDVLREMKELKPVSSDDPADTESEPCDDNSSEGELGN 241
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|743794413|ref|XP_010924164.1| (PREDICTED: uncharacterized protein LOC105047070 [Elaeis guineensis]) HSP 1 Score: 72.4034 bits (176), Expect = 9.618e-11 Identity = 59/203 (29.06%), Postives = 93/203 (45.81%), Query Frame = 0
Query: 29 PPAPLTSLQWTASPALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRH-IASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREM--LAEAEDDAGTESEEEDDEEEEGEEGG 228
P + L ++W+ +T GD + AT ++ + T P +K++ + M C+ L L L G +GAG L C + ++ LLR ++S DS S+ + L P+ +G+VW+ C+ LKK P +N A RA +VKD RE E+ A A+D AG S E D+ + +E G
Sbjct: 32 PASSLDKVEWSQ----------VTKLGDEISKQATIAGMLWSGET--PAVKALEENMGAYCNLLHGFLLLCHGSTVGAGPTLHASICASAKQVIDCSLSLLREAVSSCDS--CSSNKKLSIPK--------LSGLVWEACDALKKTPTTNCTAIGRAMTQVAVSVKDVFRELGELKPAASADDSAGGTSGEAADKTHDSDEEG 212
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|673044439|ref|XP_008876180.1| (hypothetical protein H310_11332 [Aphanomyces invadans] >gi|574467987|gb|ETV95007.1| hypothetical protein H310_11332 [Aphanomyces invadans]) HSP 1 Score: 70.0922 bits (170), Expect = 5.285e-10 Identity = 66/235 (28.09%), Postives = 96/235 (40.85%), Query Frame = 0
Query: 50 LLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEEAFWGENGGGAMREWEKENLSRCLVPLGHCGEMVKGFLEAVEEVA 284
+L +G + TKFSLVL P S+C + Q C+ LL+AL + V GAG L + C V I + +L SK L A R PE TG +W C L+ L +SN +A +R L S + DT++E L A + E ++D D+ELE+ + G + E E C+ L + K + A+ VA
Sbjct: 44 VLIAAGGSISHAVTKFSLVLGKEKVTPDSYSVCPTLFQPCEQLLSALKVAVFA--GAGYALTKELCSGVHGIFANVLDL--------SKRLEAKDLTRVPE--------LTGRIWDGCAALETLSKSNLIATKRVMLQSVSVLNDTVQELSGDLQAATEALINEQTTDNDHGAR-----------DVELEDDL-DFDMDGVLSEHEVHQFKLCVEMLQMAAAIAKKGVLALNSVA 248
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|1173952690|gb|OQS00307.1| (hypothetical protein THRCLA_06037 [Thraustotheca clavata]) HSP 1 Score: 67.3958 bits (163), Expect = 3.885e-9 Identity = 57/205 (27.80%), Postives = 91/205 (44.39%), Query Frame = 0
Query: 38 WTASPALQDALKLLTDSGDRVRDTATKFSLVLTT--TTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEE 240
W + A +L + + TKFSLV+ T S SIC + + C LLAAL + + GAG L + Q I+ + EL+R + + K R PE TG +W C ++ L +SN +A +R L + + DT+ E +LAE + + + E + EEE+ + M+ LEL++
Sbjct: 33 WQQNCDFTLARDVLLAAAGSINHQITKFSLVMAKEKTPSEAETLSICQAIYEPCQQLLAALKVAIFA--GAGFALTKEMIQGGLRIVTNMHELIRLVGVKEFK--------RVPEF--------TGRIWDSCNLMQNLSKSNLIATKRIMLQTVAVLNDTIIELDGVLAEQSNKSEEDVHERNVEEEDDLSFDMDETMSPLELQQ 219
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|397621718|gb|EJK66433.1| (hypothetical protein THAOC_12649 [Thalassiosira oceanica]) HSP 1 Score: 63.929 bits (154), Expect = 9.461e-8 Identity = 75/279 (26.88%), Postives = 119/279 (42.65%), Query Frame = 0
Query: 30 PAPLTSLQWTASP-ALQDALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKK-LPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAEDDAGTESEEEDDEEEEGEEGGLAGEMADLELEEAFWGENGGGAMREWEKENLSRCLVPLGHCGEMVKGFLEA------VEEVAMEGGGRER--RREGNT 298
P P S W P +Q A +LL+D D + T+TK++LV G ++ E+R+ + + A LL P G+ L Q R+++ + L++ D AP +G + A +TG VW C+ L+K LPR NR A RR + +++ EF +L D EEE +E + + E++ A N + + K L+ L G++V+ F+E E VA EG E +R+G T
Sbjct: 106 PGPALS-HWRTLPLQVQSAYQLLSDGADYIHATSTKYTLVAKVDAKEGG--NLALELRKGAELVGAGTLLLFSPDCGSSRSLKRYTKQFARAVISSTVALVKSFV--DGLAFGAPH-----DG-NNIGAQRTGAVWAACDNLRKVLPRGNRAAMRRELMVWVRDCSESIEEFGGILELGPRDDTCGGEEEGCMTDE-------DQFTESEMDVARAAVN----LMKCSKNVLALVLKACESAGDVVESFVEKSKDGVEAEAVAPEGSSSESGFQRKGET 362
BLAST of EWM25521.1 vs. NCBI_GenBank
Match: gi|1021569049|ref|XP_016175748.1| (uncharacterized protein LOC107618251 [Arachis ipaensis]) HSP 1 Score: 62.3882 bits (150), Expect = 2.060e-7 Identity = 66/232 (28.45%), Postives = 96/232 (41.38%), Query Frame = 0
Query: 13 ALGRHLSKLRAATTSLPPAPLTSLQWTASPALQ-----DALKLLTDSGDRVRDTATKFSLVLTTTTSGPGIKSICDEMRQSCDSLLAALALLVGPAIGAGGPLMELYCQQVRSILRAIEELLRHIASPDSKLLSAPRPLRSPEGVKDELAPKTGVVWQQCEELKKLPRSNRVAYRRAFLTHQSAVKDTLREFREMLAEAE---DDA--------GTESEEEDDEEEEGEEGG 228
LG HL+ + L L TAS AL D +K+ GD V+ AT ++ T PG K+I + M ++L L L +GAG L V+ ++ + L++ S S + L P+ V G VW+ C+ LKK P +N A RA +VKD LRE +E+ ++ D+ TE E DD EG+ G
Sbjct: 13 VLGSHLANIHET--------LQVLDQTASSALDKVSWDDVIKM----GDEVQKQATTVGMLWTG--EKPGAKAIEENMTTYFNTLQGFLLLSHASTVGAGPTLSSSVHASVKHVVDSSFRLMKDTVSSYGSH-SKDQKLSVPQLV--------GAVWEACDALKKTPATNITAIGRAMTQVAVSVKDVLREMKELKPDSSAVPDNTAVGESCAEATEDEPHDDNLSEGDLGN 221 The following BLAST results are available for this feature:
BLAST of EWM25521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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