Naga_100232g4, gene4969 (gene) Nannochloropsis gaditana

Overview
NameNaga_100232g4
Unique Namegene4969
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:251524..254700 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100232g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:251524..254700 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03170NO10G03170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5148rna5148-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5148rna5148Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5148

>rna5148-protein ID=rna5148-protein|Name=rna5148|organism=Nannochloropsis gaditana|type=polypeptide|length=615bp
MDGGLSPSSILHGLGSIRTGQWTSALTATWHITQIVAAVLVLIAERGRSC
DQKLNLWLIVSTCRVVLRLALSSVALKMSNAAWAHMRPLLLFMPPMTQAQ
ATDRSPAGPRPPTPARPPTPPRDALVVRIHPEGPPTVRDAGLSAERGSAR
GERRQRRGGEERGEEGAAPEEGRGRRRRASQDRRAGRATANVDAEAGPRT
RGGTSAGRPHPDEGGQGPSVLVEKAREILDIFALIWFTLGNAWVFGSRYC
RFTSPGIFYVSLGIIVMTYVTMLFPVLLALLFVPFACFCMPCFLRLAIQL
QAQDRASRGASSAEINALPVVKFGVGMFDGAEAGTCAICLAEYEEGEALR
LLQCPGKHHFHVGCVDQWLRINAVCPCCREEVVPSSGAPGREGEGGGNGE
DGGRDLEAGGREVAAEDGGTGGWQEEEEEEEEGEEEEGEGEGEGGEEEEG
AEEAKEEEVEGEEEEREREEEGEERRSAVASPEGLPRALWAGQGRGMTLL
LESAQAVAREGALIPRPRFTLTPLAAAMQGWQGRGGAHAPRGEEGPREGP
LLGRCVHRGGEAEGLAPLPKAVCIMNVFHVFGGHLKVKAWWAVVKGKVKR
VQVVARPHGAHRSYL
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Synonyms
Publications