NO10G03170, NO10G03170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03170 vs. NCBI_GenBank
Match: EWM25539.1 (e3 ubiquitin-protein ligase [Nannochloropsis gaditana]) HSP 1 Score: 337.4 bits (864), Expect = 1.000e-88 Identity = 230/398 (57.79%), Postives = 261/398 (65.58%), Query Frame = 0 Query: 1 MDGGLSLSSFLHGLGDVRSGQLTSALTTIWYIIQIIASISVLIVEWEHACDQRLNLWLTVSTCRVILRLALSSIALTLATTAWGRVRQ---FLP------SSSSVVLASLPTSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLHTPIIPSSPSRXXXXXXXXXXXXXXXXXXXXXEKAREILDILALIWFTLGNAWVFGSRSCRFTSPGIFYVSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDGNTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDVVPNRPASPGRQQTG 390 MDGGLS SS LHGLG +R+GQ TSALT W+I QI+A++ VLI E +CDQ+LNLWL VSTCRV+LRLALSS+AL ++ AW +R F+P ++ XXXXXXXXX XXXXXXXXX XXXXXXXXXXXXXXXXXXX EKAREILDI ALIWFTLGNAWVFGSR CRFTSPGIFYVSL II++TYV+MLFPVLLA+LFVP ACFCMPCFLRLA+Q++AQD +RGAS EI+ALP V + GMFD G GTCAICL EYEE E LR+LQCPGKHHFHV CVDQWLRIN+VCPCCRE+VVP+ A PGR+ G Sbjct: 1 MDGGLSPSSILHGLGSIRTGQWTSALTATWHITQIVAAVLVLIAERGRSCDQKLNLWLIVSTCRVVLRLALSSVALKMSNAAWAHMRPLLLFMPPMTQAQATDRXXXXXXXXXXXXXXXXXXXALVVRIHPEGPPTVRDAGLSAERGSARGERRQRXXXXXXXXXGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTSAGRPHPDEGGQGPSVLVEKAREILDIFALIWFTLGNAWVFGSRYCRFTSPGIFYVSLGIIVMTYVTMLFPVLLALLFVPFACFCMPCFLRLAIQLQAQDRASRGASSAEINALPVVKFGVGMFD--GAEAGTCAICLAEYEEGEALRLLQCPGKHHFHVGCVDQWLRINAVCPCCREEVVPSSGA-PGREGEG 395
BLAST of NO10G03170 vs. NCBI_GenBank
Match: XP_005854584.1 (ring u-box domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21777.1 ring u-box domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.4 bits (581), Expect = 6.800e-56 Identity = 111/142 (78.17%), Postives = 122/142 (85.92%), Query Frame = 0 Query: 214 EKAREILDILALIWFTLGNAWVFGSRSCRFTSPGIFYVSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDGNTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHV 356 EKAREILDI ALIWFTLGNAWVFGSR CRFTSPGIFYVSL II++TYV+MLFPVLLA+LFVP ACFCMPCFLRLA+Q++AQD +RGAS EI+ALP V + GMFD G GTCAICL EYEE E LR+LQCPGKHHFHV Sbjct: 187 EKAREILDIFALIWFTLGNAWVFGSRYCRFTSPGIFYVSLGIIVMTYVTMLFPVLLALLFVPFACFCMPCFLRLAIQLQAQDRASRGASSAEINALPVVKFGVGMFD--GAEAGTCAICLAEYEEGEALRLLQCPGKHHFHV 326
BLAST of NO10G03170 vs. NCBI_GenBank
Match: OQR99843.1 (transmembrane protein [Achlya hypogyna]) HSP 1 Score: 133.3 bits (334), Expect = 3.000e-27 Identity = 69/176 (39.20%), Postives = 103/176 (58.52%), Query Frame = 0 Query: 214 EKAREILDILALIWFTLGNAWVFGSRSCRFTSPG--IFYVSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDG-NTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDVVPNR-PASPGR 386 + A+ ++++ L WF +GN WV T G ++ ++LA+II+ Y+ + P L+ V +P+ CFC+PC +R+ R QD +GAS+ IDAL +V Y +F E +C ICL EY E + +R+L C HHFH CVD+WL +N+ CP CR + PNR A+P R Sbjct: 120 QSAKYCMELMGLFWFLVGNMWVISDEDHCSTQGGGHMYNMALAMIIICYIKIFLPCLILVALLPVVCFCLPCLIRIL--NRMQDPMRGKGASKEMIDALSSVPYTPNLFPDE---DASCCICLNEYSEAQHVRILHC--NHHFHKECVDEWLVVNATCPTCRTSIDPNRVEATPDR 288
BLAST of NO10G03170 vs. NCBI_GenBank
Match: XP_009834050.1 (hypothetical protein H257_09515 [Aphanomyces astaci] >ETV76505.1 hypothetical protein H257_09515 [Aphanomyces astaci]) HSP 1 Score: 131.3 bits (329), Expect = 1.100e-26 Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = 0 Query: 220 LDILALIWFTLGNAWVFGSRSCRFTSPG--IFYVSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDG-NTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDVVPNRPASP 384 L++L L WF +GN W+ T G ++ ++ A++ + Y + P L+ V +P+ CFC+PC +RL R QD +GA+ I LP+V Y MF E +C ICL EY ++TLR+L C KHHFH ACVD+WL +N+ CP CR + PN A P Sbjct: 166 LELLGLFWFLVGNMWIISDEEHSSTKAGGHLYNMAFAMVTICYAKIFLPCLILVALLPIVCFCLPCLIRLL--NRMQDPMRGKGATAEIIAKLPSVPYASSMFPDE---DASCCICLNEYIHDQTLRVLPC--KHHFHQACVDEWLVVNATCPTCRTSIDPNEGAVP 325
BLAST of NO10G03170 vs. NCBI_GenBank
Match: XP_008865210.1 (hypothetical protein H310_03198 [Aphanomyces invadans] >ETW05433.1 hypothetical protein H310_03198 [Aphanomyces invadans]) HSP 1 Score: 129.0 bits (323), Expect = 5.600e-26 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 0 Query: 220 LDILALIWFTLGNAWVFGSRSCRFTSPG--IFYVSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDG-NTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDVVPNRPASPGRQ 387 L++L L WF +GN W+ T G ++ ++ A+I + Y+ + P L+ V +P+ CFC+PC +RL R QD +GA+ I LP+ Y MF E +C ICL EY ++T+R+L C KHHFH ACVD+WL +N+ CP CR+ + PN +P RQ Sbjct: 161 LELLGLFWFLVGNMWIISDEEHSSTKAGGHLYNMAFAMITICYIKIFLPCLILVALLPIVCFCLPCLIRLL--NRMQDPMRGKGAAAEIIAKLPSAPYVPSMFPDE---DASCCICLNEYVRDQTVRVLHC--KHHFHQACVDEWLVVNATCPTCRKSIDPNE--APPRQ 321
BLAST of NO10G03170 vs. NCBI_GenBank
Match: XP_009034871.1 (hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens] >EGB10028.1 hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]) HSP 1 Score: 128.3 bits (321), Expect = 9.600e-26 Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 0 Query: 216 AREILDILALIWFTLGNAWVFGSR--SCRFTSPGIFYVS-LAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDGNTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDV 376 AR LD LALIWF +GN W+ G SC YV+ + +++V Y + P + A+ VP+ CFC+PC +RL + RGA++ ++ LPTV Y E M + G C++C+++YE+ + LR+L C KH FHV CVDQWL +N+ CP CR+ + Sbjct: 158 ARNSLDALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLVVQYGQICLPCIFAIAMVPVFCFCLPCVIRLLASLHDPVAG-RGATKRDLARLPTVPYSENM-ELLKGEDPCCSVCISDYEKGDKLRVLPC--KHLFHVDCVDQWLSVNATCPLCRKSI 316
BLAST of NO10G03170 vs. NCBI_GenBank
Match: XP_008620569.1 (hypothetical protein SDRG_16148 [Saprolegnia diclina VS20] >EQC26001.1 hypothetical protein SDRG_16148 [Saprolegnia diclina VS20]) HSP 1 Score: 127.1 bits (318), Expect = 2.100e-25 Identity = 69/178 (38.76%), Postives = 101/178 (56.74%), Query Frame = 0 Query: 214 EKAREILDILALIWFTLGNAWVFGSRS-CRFTSPGIFY-VSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDG-NTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDVVPNR---PASPGR 386 + A+ ++++ L WF +GN WV C G Y ++LA+II+ YV + P L+ + +P+ CFC+PC +R+ R QD +GAS+ I AL +V Y +F E +C ICL EY+E + +R+L C HHFH CVD+WL +N+ CP CR + PN AS GR Sbjct: 136 QSAKYGMELMGLFWFLVGNMWVISDEDHCSTQGDGHMYNMALAMIIICYVKIFLPCLILMALLPVVCFCLPCLIRIL--NRMQDPMRGKGASKEMIAALSSVPYTPHLFPDE---DASCCICLNEYDESQHVRILHC--NHHFHKECVDEWLLVNATCPTCRTSIDPNHVEPAASSGR 306
BLAST of NO10G03170 vs. NCBI_GenBank
Match: XP_012195473.1 (hypothetical protein SPRG_01716 [Saprolegnia parasitica CBS 223.65] >KDO33837.1 hypothetical protein SPRG_01716 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 126.3 bits (316), Expect = 3.600e-25 Identity = 68/178 (38.20%), Postives = 101/178 (56.74%), Query Frame = 0 Query: 214 EKAREILDILALIWFTLGNAWVFGSRS-CRFTSPGIFY-VSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDG-NTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDVVPNR---PASPGR 386 + A+ ++++ L WF +GN WV C G Y ++LA+II+ Y+ + P L+ + +P+ CFC+PC +R+ R QD +GAS+ I AL +V Y +F E +C ICL EY+E + +R+L C HHFH CVD+WL +N+ CP CR + PN AS GR Sbjct: 134 QSAKYGMELMGLFWFLVGNMWVISDEDHCSTQGDGHMYNMALAMIIICYIKIFLPCLILMALLPVVCFCLPCLIRIL--NRMQDPMRGKGASKEMIAALSSVPYTPHLFPDE---DASCCICLNEYDESQHVRILHC--NHHFHKECVDEWLVVNATCPTCRTSIDPNHAEPAASSGR 304
BLAST of NO10G03170 vs. NCBI_GenBank
Match: OQR85950.1 (transmembrane protein [Thraustotheca clavata]) HSP 1 Score: 125.2 bits (313), Expect = 8.100e-25 Identity = 61/168 (36.31%), Postives = 98/168 (58.33%), Query Frame = 0 Query: 214 EKAREILDILALIWFTLGNAWVFGSRS-CRFTSPG-IFYVSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDG-NTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDVVPN 379 + A+ L+++ L WF +GN WV C G I+ +++A++I+ Y+ + P L+ + +P+ CFC+PC +R+ R QD +GA++ I+AL +V Y +F + +C ICL EY + + LR+L C HHFH CVD+WL +N+ CP CR + PN Sbjct: 131 QSAKYCLELMGLFWFLVGNMWVISDEDHCSANGGGHIYNMAMAMVIICYIKIFLPCLILLALLPVVCFCLPCLIRIL--NRMQDPMRGKGATKEMIEALSSVKYTPDLFPPD--EDASCCICLNEYTDNQELRILHC--NHHFHKDCVDEWLVVNATCPTCRTSIDPN 292
BLAST of NO10G03170 vs. NCBI_GenBank
Match: XP_009534322.1 (hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae] >EGZ09461.1 hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae]) HSP 1 Score: 121.3 bits (303), Expect = 1.200e-23 Identity = 61/157 (38.85%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 220 LDILALIWFTLGNAWVFGSRSCRFTSPGIFYVSLAIIIVTYVSMLFPVLLAVLFVPLACFCMPCFLRLALQVRAQDG-NTRGASRTEIDALPTVIYREGMFDGEGGNGGTCAICLTEYEEEETLRMLQCPGKHHFHVACVDQWLRINSVCPCCREDV 376 LD+ L WF +GN WV + ++ ++L +I+++Y + P LL + +P+ CFC+PC +RL R QD +GA++ ID L T Y MF E C ICL +YE ++LR+L C +HHFH CVD+WL +NS CP CR+ + Sbjct: 150 LDLAGLFWFLVGNMWVISDGARCDDGSAMYQLALWMIVISYAKIFLPCLLLLALLPVLCFCLPCVIRLL--SRLQDPMRGKGATKEIIDRLETKTYSANMFPPE---DACCCICLNDYEPSQSLRVLPC--EHHFHKDCVDEWLLVNSTCPTCRKSI 299 The following BLAST results are available for this feature:
BLAST of NO10G03170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03170 ID=NO10G03170|Name=NO10G03170|organism=Nannochloropsis oceanica|type=gene|length=3134bpback to top protein sequence of NO10G03170.1 >NO10G03170.1-protein ID=NO10G03170.1-protein|Name=NO10G03170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=697bpback to top Synonyms
Publications
|