rna5086, rna5086 (mRNA) Nannochloropsis gaditana

Overview
Namerna5086
Unique Namerna5086
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length628
Alignment locationCM002465.1:84799..86355 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101119g1.4000.mrna
Orig protein idgnl|cribi|Naga_101119g1.4000
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:84799..86355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101119g1gene4911Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna5086rna5086-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25599.1cds5074Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna5086 ID=rna5086|Name=rna5086|organism=Nannochloropsis gaditana|type=mRNA|length=628bp
GAAGGCTTTCCCTCACTGCCCTCGCTACTATCTGAAGACACTCCATGCGC
CTTGTCTTGCATTCTGCCCACGCTTTCACCACGACTAATCGCTTGATCTG
TCTGTCTTACAAGCAGGTGTAGACGGGCTTGGATCTTCTTTGCTGCGGGG
TCCTCTCCCAGCAAAGGGCAGGCGGGCCTTTTGGTCCCCCATGCCAAGTG
AACCCACCGCTCTCGTCCCCTCGTCCACGTGCGCCCGAACCGCTCCGACG
CCTCCACACACCAATGCCGTTCCAACAGGCAATGGACTTCGGGCACAGCC
TCCTTTCCCCCCTCCTTTCGGCCCTCCGCCTTGTCCAGCTCCGCCAGCGG
ACGATTGGTTTCGTGCAACTTTGATCCGGAATGGGAAGGTCATCGAAGAA
GGAGCGAAGTGCCGCCTATGGGCCGTCCCGGCCAGCGTATCCCTCGGCTT
GAAGATGCCGTCGGGGGGGGAGGAAAGGGCAAAGAGACGCACGGTACGTG
GGAGGAGGGCAGTGCGGAGGGGGGGTGCTTGGTGTGCCGGTGTCCTTGGG
GAGGTGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGTGGAAGAGGAGGGGAGGGGA
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protein sequence of rna5086

>rna5086-protein ID=rna5086-protein|Name=rna5086|organism=Nannochloropsis gaditana|type=polypeptide|length=214bp
MDPFLHDAAILQLCEPRGASAVDAAIAFMPGVSLALAIDLCIRHSLVSRL
ERLLFPSLPSSSPSFSSSFPPETEATVLARTLSLLLQLDDSFSTDPQGLA
SLACVHGTETSAADAYYPPPPSHPCSAIRRVGLFFAQHGREEEAFFLSLL
LRDPKLTIEIALAAGRPEAAAAVVAGRQEREEGGEEEEERVVRAWNEFLQ
EQGSEVRINGRRNP
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mRNA from alignment at CM002465.1:84799..86355-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna5086 ID=rna5086|Name=rna5086|organism=Nannochloropsis gaditana|type=mRNA|length=1557bp|location=Sequence derived from alignment at CM002465.1:84799..86355- (Nannochloropsis gaditana)
GGCCTGAAAATCACCCTCTGTCACTCTCTCCCTCCCGCCCTCCTTCCCTC
CCTCCCGCCCTCCCCAGGCCATGGATCCTTTTTTGCACGATGCTGCCATC
CTTCAACTGTGTGAACCTCGAGGAGCCTCTGCGGTGGACGCGGCGATCGC
CTTCATGCCCGGTAAAGGACGGAAGCGCTTGCGCCTGGAAGTGATGAAGT
AGAAGGGAATGGGGAAGGCATACCGTAGCTTCCTCCCATCCCTCCTTCCC
CTTCCCTTAACTTTGCTCCCACCAGGCGTATCTTTGGCCCTCGCCATCGA
CCTCTGCATCCGCCACTCTCTCGTTTCCCGCCTGGAGCGCCTCCTTTTCC
CCTCCCTTCCCTCCTCTTCTCCCTCCTTCTCCTCCTCTTTCCCCCCGGAG
ACGGAAGCCACGGTCCTTGCGCGGACGCTGTCGCTTCTCCTTCAGGTACG
ACAATCACCCTTATCATCCGGTTCAGGTAGAGAGGGGAACAGACCATACA
AGCACGCTTCTATTTACGAATAGAGAAAGAGGAAGAAGAGCTTGGTAATT
GTCGGCTTGTCAGTTGGCCCCTGAGGCCATGGCAGGATGTCACTCCGCCC
CTGCCCGGGAGCATCGAATAGTACCCGGACGTATCCAATCGCGTCCTCGT
GCAGCCCACGCCGGGCACCTCTTCCACAGTCACGACATTCACGACCAGTC
TTTTCTTACAATTTTGTTTAAAATACCCAATTCATCACGTTCTACCCTCC
TTTTGGAGGCCCTGTGATCCTGCCGCCTGAACCCTTGTCCCTCCCCTCGT
TCTTTCCTCCCTCCCCCCCCCCCTCCTTCCCTCCACGTCTCCCCCCAGCT
CGACGACTCCTTCTCCACGGATCCTCAGGGTCTTGCCTCTCTGGCCTGTG
TGCACGGAACAGAGACATCTGCAGCAGACGCATACTATCCTCCGCCCCCC
TCCCATCCCTGCTCGGCCATCCGACGGGTGGGACTCTTCTTTGCACAGCA
CGGCCGGTACGCCGGGGAGAAAGCAAGGGAAGAGGGATTTTTTAAAAAAT
GGTTGCCTTCTCTCTACCCCTCTCCCTCTTTCCTTAAACCGGAAAAGGGA
GGGAAAGAGGGTCTAGCGCCCCACCACCAGCTTGATCGGTGGCTGCACTA
TTTGTACCCCTGTATCCGCCCAACATATTTAGCCTCCTTTCCTCCCTCTC
TCTTGTCCACATTTGTTCACTCTTTCCTCCAGGTTGGACCTGGTCCGACG
CCTGCTCGATGGCTGCCGGGGCCCGCCTCCCGCCGCCCGCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCGCTCTCGTCAAAGGGAGGAAGAGGCATTTTTC
CTCTCCCTCCTTCTCCGCGATCCGAAGTTGACCATCGAAATAGCATTGGC
CGCAGGACGGCCCGAGGCAGCAGCAGCTGTGGTAGCGGGAAGGCAGGAAA
GGGAGGAAGGGGGGGAGGAGGAGGAGGAGAGGGTTGTTAGGGCGTGGAAT
GAGTTTTTACAGGAGCAAGGGAGCGAGGTCAGGATCAATGGACGCCGAAA
CCCTTGA
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Coding sequence (CDS) from alignment at CM002465.1:84799..86355-

>rna5086 ID=rna5086|Name=rna5086|organism=Nannochloropsis gaditana|type=CDS|length=2580bp|location=Sequence derived from alignment at CM002465.1:84799..86355- (Nannochloropsis gaditana)
GGAGGAAGAGGCATTTTTCCTCTCCCTCCTTCTCCGCGATCCGAAGTTGA
CCATCGAAATAGCATTGGCCGCAGGACGGCCCGAGGCAGCAGCAGCTGTG
GTAGCGGGAAGGCAGGAAAGGGAGGAAGGGGGGGAGGAGGAGGAGGAGAG
GGTTGTTAGGGCGTGGAATGAGTTTTTACAGGAGCAAGGGAGCGAGGTCA
GGATCAATGGACGCCGAAACCCTTGACTCGACGACTCCTTCTCCACGGAT
CCTCAGGGTCTTGCCTCTCTGGCCTGTGTGCACGGAACAGAGACATCTGC
AGCAGACGCATACTATCCTCCGCCCCCCTCCCATCCCTGCTCGGCCATCC
GACGGGTGGGACTCTTCTTTGCACAGCACGGCCGGCGTATCTTTGGCCCT
CGCCATCGACCTCTGCATCCGCCACTCTCTCGTTTCCCGCCTGGAGCGCC
TCCTTTTCCCCTCCCTTCCCTCCTCTTCTCCCTCCTTCTCCTCCTCTTTC
CCCCCGGAGACGGAAGCCACGGTCCTTGCGCGGACGCTGTCGCTTCTCCT
TCAGATGGATCCTTTTTTGCACGATGCTGCCATCCTTCAACTGTGTGAAC
CTCGAGGAGCCTCTGCGGTGGACGCGGCGATCGCCTTCATGCCCGGGAGG
AAGAGGCATTTTTCCTCTCCCTCCTTCTCCGCGATCCGAAGTTGACCATC
GAAATAGCATTGGCCGCAGGACGGCCCGAGGCAGCAGCAGCTGTGGTAGC
GGGAAGGCAGGAAAGGGAGGAAGGGGGGGAGGAGGAGGAGGAGAGGGTTG
TTAGGGCGTGGAATGAGTTTTTACAGGAGCAAGGGAGCGAGGTCAGGATC
AATGGACGCCGAAACCCTTGACTCGACGACTCCTTCTCCACGGATCCTCA
GGGTCTTGCCTCTCTGGCCTGTGTGCACGGAACAGAGACATCTGCAGCAG
ACGCATACTATCCTCCGCCCCCCTCCCATCCCTGCTCGGCCATCCGACGG
GTGGGACTCTTCTTTGCACAGCACGGCCGGCGTATCTTTGGCCCTCGCCA
TCGACCTCTGCATCCGCCACTCTCTCGTTTCCCGCCTGGAGCGCCTCCTT
TTCCCCTCCCTTCCCTCCTCTTCTCCCTCCTTCTCCTCCTCTTTCCCCCC
GGAGACGGAAGCCACGGTCCTTGCGCGGACGCTGTCGCTTCTCCTTCAGA
TGGATCCTTTTTTGCACGATGCTGCCATCCTTCAACTGTGTGAACCTCGA
GGAGCCTCTGCGGTGGACGCGGCGATCGCCTTCATGCCCGGGAGGAAGAG
GCATTTTTCCTCTCCCTCCTTCTCCGCGATCCGAAGTTGACCATCGAAAT
AGCATTGGCCGCAGGACGGCCCGAGGCAGCAGCAGCTGTGGTAGCGGGAA
GGCAGGAAAGGGAGGAAGGGGGGGAGGAGGAGGAGGAGAGGGTTGTTAGG
GCGTGGAATGAGTTTTTACAGGAGCAAGGGAGCGAGGTCAGGATCAATGG
ACGCCGAAACCCTTGACTCGACGACTCCTTCTCCACGGATCCTCAGGGTC
TTGCCTCTCTGGCCTGTGTGCACGGAACAGAGACATCTGCAGCAGACGCA
TACTATCCTCCGCCCCCCTCCCATCCCTGCTCGGCCATCCGACGGGTGGG
ACTCTTCTTTGCACAGCACGGCCGGCGTATCTTTGGCCCTCGCCATCGAC
CTCTGCATCCGCCACTCTCTCGTTTCCCGCCTGGAGCGCCTCCTTTTCCC
CTCCCTTCCCTCCTCTTCTCCCTCCTTCTCCTCCTCTTTCCCCCCGGAGA
CGGAAGCCACGGTCCTTGCGCGGACGCTGTCGCTTCTCCTTCAGATGGAT
CCTTTTTTGCACGATGCTGCCATCCTTCAACTGTGTGAACCTCGAGGAGC
CTCTGCGGTGGACGCGGCGATCGCCTTCATGCCCGGGAGGAAGAGGCATT
TTTCCTCTCCCTCCTTCTCCGCGATCCGAAGTTGACCATCGAAATAGCAT
TGGCCGCAGGACGGCCCGAGGCAGCAGCAGCTGTGGTAGCGGGAAGGCAG
GAAAGGGAGGAAGGGGGGGAGGAGGAGGAGGAGAGGGTTGTTAGGGCGTG
GAATGAGTTTTTACAGGAGCAAGGGAGCGAGGTCAGGATCAATGGACGCC
GAAACCCTTGACTCGACGACTCCTTCTCCACGGATCCTCAGGGTCTTGCC
TCTCTGGCCTGTGTGCACGGAACAGAGACATCTGCAGCAGACGCATACTA
TCCTCCGCCCCCCTCCCATCCCTGCTCGGCCATCCGACGGGTGGGACTCT
TCTTTGCACAGCACGGCCGGCGTATCTTTGGCCCTCGCCATCGACCTCTG
CATCCGCCACTCTCTCGTTTCCCGCCTGGAGCGCCTCCTTTTCCCCTCCC
TTCCCTCCTCTTCTCCCTCCTTCTCCTCCTCTTTCCCCCCGGAGACGGAA
GCCACGGTCCTTGCGCGGACGCTGTCGCTTCTCCTTCAGATGGATCCTTT
TTTGCACGATGCTGCCATCCTTCAACTGTGTGAACCTCGAGGAGCCTCTG
CGGTGGACGCGGCGATCGCCTTCATGCCCG
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Synonyms
Publications