EWM25599.1, cds5074 (CDS) Nannochloropsis gaditana

Overview
NameEWM25599.1
Unique Namecds5074
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:86195..86285 -
Alignment locationCM002465.1:85911..86080 -
Alignment locationCM002465.1:85350..85507 -
Alignment locationCM002465.1:84799..85024 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25599.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101119g1.4000.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:86195..86285 -
CM002465.1supercontigCM002465.1:85911..86080 -
CM002465.1supercontigCM002465.1:85350..85507 -
CM002465.1supercontigCM002465.1:84799..85024 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25599.1 vs. NCBI_GenBank
Match: gi|585107404|gb|EWM25599.1| (hypothetical protein Naga_101119g1 [Nannochloropsis gaditana])

HSP 1 Score: 426.017 bits (1094), Expect = 9.623e-151
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 
Query:    1 MDPFLHDAAILQLCEPRGASAVDAAIAFMPGVSLALAIDLCIRHSLVSRLERLLFPSLPSSSPSFSSSFPPETEATVLARTLSLLLQLDDSFSTDPQGLASLACVHGTETSAADAYYPPPPSHPCSAIRRVGLFFAQHGREEEAFFLSLLLRDPKLTIEIALAAGRPEAAAAVVAGRQEREEGGEEEEERVVRAWNEFLQEQGSEVRINGRRNP 214
            MDPFLHDAAILQLCEPRGASAVDAAIAFMPGVSLALAIDLCIRHSLVSRLERLLFPSLPSSSPSFSSSFPPETEATVLARTLSLLLQLDDSFSTDPQGLASLACVHGTETSAADAYYPPPPSHPCSAIRRVGLFFAQHGREEEAFFLSLLLRDPKLTIEIALAAGRPEAAAAVVAGRQEREEGGEEEEERVVRAWNEFLQEQGSEVRINGRRNP
Sbjct:    1 MDPFLHDAAILQLCEPRGASAVDAAIAFMPGVSLALAIDLCIRHSLVSRLERLLFPSLPSSSPSFSSSFPPETEATVLARTLSLLLQLDDSFSTDPQGLASLACVHGTETSAADAYYPPPPSHPCSAIRRVGLFFAQHGREEEAFFLSLLLRDPKLTIEIALAAGRPEAAAAVVAGRQEREEGGEEEEERVVRAWNEFLQEQGSEVRINGRRNP 214
The following BLAST results are available for this feature:
BLAST of EWM25599.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107404|gb|EWM25599.1|9.623e-151100.00hypothetical protein Naga_101119g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5086rna5086Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications