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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100251g2.7586.mrna |
Orig protein id | gnl|cribi|Naga_100251g2.7586 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002465.1 | supercontig | CM002465.1:23282..24034 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5068 ID=rna5068|Name=rna5068|organism=Nannochloropsis gaditana|type=mRNA|length=3218bp ATCCCTGCCAAGACGGTCGTGCGCGCCGCCTCGTACACTGCCAAATATTC GATGCTAGACTAATCGTTTTTCTTGTGATATCGGAAATGTACTCAAACAA GTAGACGACCGACCTTGACAAGGAAAGACACGGTAGTTGATCCATTTTTT CGGGTCATTTTTTCGTCCTTGGGCGCCATCGGCGGGCGGCGACAGGGGAG TAGGCGAACGTTTTGTGCAAAATTCAACACCAGCCCAATCCGTGCAAATG CGCAAACCAATCAATTTAAAACTGTCAGTCATGGACATACATCACTAATT TGAGAATATAGTTGTACGAGTAGTGTCGGAGTGGCTGTCTCGGTATCGAG TGGTATGTCAGGACGCGGTCCCAATGGACTTCAGCCACCCCGTCCCCATG CCCATACCACCGCCGACATGCGGCATTGTGTGCTCGTTCCTGCACCACTG TCGTCTATTTTCTCTCAAACTCTTTCTCAAATGCACGAAAATAGGTGAAT CCTCCCGTGTAATCACAAGCGGCCGGGTCTTGATTTTTAAAGGCGCTAAG GCCTGTCTGACAGGCAACAGCCTTAGCTGCCTGAGCTCGGAGGAGGACTC GCAGAGTTCTGCTTGCTCCCGCTTCATTAATTTTCCACCGTTGACAAAGG TGTCGTGACATATTGAGTGTCATGAATAAAAATGATACAAGCACGCACTT CTCAGAGGCCTACTACGCTGTCCCATCTTCCTCGCCTCACTCTGAAGACG TTGGGAATGTAGAGCCGAGAGCCTCGCCCACTGAGCAGAATCGCAGCATA GTTCCCAGCGCCAATAAAGCACTGGTCGATATTACTCTGTCACCGCCCCG TGGGGAAGACGAGAAAAGCACCGTGGTCGTGCGGAGCGAAAATGAAATTG TTCCGACGGACATCAAGGCAACGAGCAGTAGCAGCAGTCTTAGCACGTCC GGCACCCCACCATGCCACGTCCTTGGAAGGCGGAGCTCGCGACACAGTGG GTACACCCTTGCCCTCCTGGCTGCCATCATGGGCAACGTCCTCGAGTTCT ACGATTTCAGTGTCTACGCTTTTTTCGCACCCGAGATTGGGCAGCTATTC TTTTCCAGTGGCTCGGATACGGTGCGGGCTATCCAGACCTTCACCGTCTT TGCCGGCGGCTTCTTGATGCGGCCGGTGGGCTCGGTGGTGCTGGGGGCGG TGGGGGACAAGTACGGGACGGCCGCTGCCCTCAAGTGGTCGATCGGGCTG ATGACGGTGCCGACCATCGTCACGGGCCTGCTCCCCACCTACTCCAAGAT CGGCCTTGCCGCGCCCCTCCTCCTCACACTCTGCCGGCTCCTCCAAGGCC TCTCGGTGGGGGGGGAGCTGATCGGCGCCCTCCTGCACACGGCCGACCAC TCCCCAGCCGAGCACCGCGGTTTCTTCTGCGGCTTGGTGGCGGTCTTCGG GAGCATGGGTAACCTGGTGGGCTCCCTGGTGAGTGTGCTGATGCGACACG CTCTCTCCAAGCAGGAGCTGCTCTCCTGGGGCTGGCGCATTCCCTTCTTG GCCGGCTCGGTGCTGGGCCTGGTGGGGATCTTCCTACGGACCAAGACCGG CGCCCTGAAGCATGGCGGGGAGGCGGGCAGGCGGCCGACGAGGGAGGAAC AGGTCTTGATCGAGATGGTGGAGTGTCCGATAGCGGTGGAGGAGGAAACG GTGGCTGCCTACCGGGAAGCGGCGCGAATGGAGGAGGAGGAGGAGGAGGA GGAGGAAGGGGAACAGCGAGGGAAAGAGGGAGAGACAGGGGCCGTGGCAG CGCGCCCCTCCCACCCACGGTCCTTTTGTGGGATCCTGCGGGAGGCGGCG GCGGGGGACAAGCCGCGCTTCATACGCGTGGTCGTCCTAGCTGCCCTCAA CAACTCTCTCTTTTACTTCAACTTTGTCTGGCTCGGCACCTATATGGCGG AGCTCGCGCCCAACCCCCTGGGGGCGGCGCAAGCCTTCAGTGTCACGTGC GTGGCCCAAGCCGTTTTCATCTTTGGAAATCCTTTTTGGGGGGCCATGGG GGACTGGGGGGGCGGGCTGGCGAAGCGCCTCCGCTGGAACATCGTGGGCG TGGTCCTAAGCTGCTTCCTCCCTCCCTGCCTCTTCCTCCTCCTCCGCTCC GGACGCGCCTCCCTGAGCTTCCTATTCGCTGCCCTCACCGGTCTCTTGAT GGGCTTCACCGTCTCGGGAAATTACTACGCCTGGGTCTGCGAGAGCCTGA ATGAATCCCCCTCTCGGGTTCTCACCACCTCGGTTGCCTACAACGTCGGG GCCGTCGTGGGCGGATGCACCCCAATGCTGGCGAGTGCCCTTTCTGCGAG TCCTATATTCCTCGCGCCCATCTTGCCTTTGTCGGCGGTGGCAGCGGCGG TGGCGGTGGTGCTGGGCCGGTACGAATGGGGTGAATACGTGAAGAGAAAG GCGGAGGGCGGGAAGGGGGGGCGGGAGGAGTTCTTGGCCCTGCGCGTGGA GGAGGGGAAGGAGGGGAAAGGGAAAATGGCGAAAGCGAAAGTCAAAGCAA GGGGGGAGGAGCCTGCGGACACCAGCTAAAGGAGAGGAAGGGATGCGGAG GACTCTGTCTCGAGCCATCGCTTTGAAGGAGTAGGGGGCCAGGGAGCGAG AAGAGAAAACGAGCAGCCGCATGGTCGACTTGTGTTGAATAGAGAAAAGA GTGGGGATCTCTGGGAGCAGGGGAGCTTCAAAGGCAAGATCCAGAGTTAG AGACGGGGGAAAAGAGAAGAGACGTTGTAGAGGCAAGTGAAAGTGTGTGG TAGGATTCGAGCATTGTGAGATCTCGCACAGTACCTTGATACCCGAGAGG AAGGGTCTGGATCTTTGAGGAGCATGGAAGAGGATGGAGAGATGAGACGG ACTGAGAGCCCGACGGACCGTGGATGGGGTCACGGAACGCCCGCCAAGGA TTTTTGACTGTCGTCGATGGATGTAGGAGTACATCTACTTGCACAGGACT CGAAGCTTAGGCTGTGTTGAATGCATTTCTGCACATAGTGGGTATTTATT ACGTGTGGTGGTGAAAGGATCCAAAGCGTCAATCTTAACGCGGTAAAACG AACCAAATTGATCTGGAAATAAGAATGGAAGGGAATAGGTGCAACAGTAA ACGTTGCCGAAATCCGCTTGCCCTGGCCGCGATACGTCGAATGAAAACGC GAATGACCTTGGGCCATG back to topprotein sequence of rna5068 >rna5068-protein ID=rna5068-protein|Name=rna5068|organism=Nannochloropsis gaditana|type=polypeptide|length=194bp MDQLPCLSLSRSVVYLFEYISDITRKTISLASNIWQCTRRRARPSWQGSS LSASQLVCRGPYLFLSTTKKHDHESRLHLTPRPMSCEAEILYQMQFCGLT PILRVPYRLPETILCKGFARNLANSYFDLLPSCNIHSYRGRSAFTKRVQN AFLGRVDYLYVSFMLDSKQENACNALQITRSFLIVPGMTLCARG back to topmRNA from alignment at CM002465.1:23282..24034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5068 ID=rna5068|Name=rna5068|organism=Nannochloropsis gaditana|type=mRNA|length=753bp|location=Sequence derived from alignment at CM002465.1:23282..24034+ (Nannochloropsis gaditana) ATGGATCAACTACCGTGTCTTTCCTTGTCAAGGTCGGTCGTCTACTTGTT
TGAGTACATTTCCGATATCACAAGAAAAACGATTAGTCTAGCATCGAATA
TTTGGCAGTGTACGAGGCGGCGCGCACGACCGTCTTGGCAGGGAtcgtcc
ctctccgcctcccaaCTCGTTTGCCGTGGCCCATACCTTTTTCTGTCCAC
CACCAAGAAACATGACCATGAATCTCGTTTACATTTGACACCACGTCCAA
TGGTTGGTTATATCACATATATAAATCGAACTCACTAGTGGTAAATGTTT
TGTGGCATTTGCGAGAAAGCATGGTAGTCTTGTGAGGCCGAGATACTGTA
CCAGATGCAGTTCTGTGGCTTGACACCCATACTTAGGGTACCTTATCGTC
TTCCGTTCAGAAAGCTATGATCGAGCTTAAAATTTACAGCTTCTCACGCA
CTTGAACATGAAAATTTACCCTTGATTCGTTCCATGTCTTGAAACAGAGA
AACCATTCTCTGTAAAGGCTTTGCAAGGAATCTTGCAAACAGTTATTTtg
acctcctgccttcctgtAACATACACTCATACCGGGGGAGAAGCGCTTTT
ACGAAACGAGTCCAAAACGCATTTTTGGGGAGGGTTGACTACCTCTACGT
TTCATTCATGTTGGATTCAAAACAAGAAAACGCGTGCAATGCATTACAAA
TCACACGTTCATTCCTTATTGTTCCTGGTATGACCTTGTGCGcacgagga
tga back to topCoding sequence (CDS) from alignment at CM002465.1:23282..24034+ >rna5068 ID=rna5068|Name=rna5068|organism=Nannochloropsis gaditana|type=CDS|length=1755bp|location=Sequence derived from alignment at CM002465.1:23282..24034+ (Nannochloropsis gaditana) ATGGATCAACTACCGTGTCTTTCCTTGTCAAGGTCGGTCGTCTACTTGTT TGAGTACATTTCCGATATCACAAGAAAAACGATTAGTCTAGCATCGAATA TTTGGCAGTGTACGAGGCGGCGCGCACGACCGTCTTGGCAGGGAtcgtcc ctctccgcctcccaaCTCGTTTGCCGTGGCCCATACCTTTTTCTGTCCAC CACCAAGAAACATGACCATGAATCTCGTTTACATTTGACACCACGTCCAA TGTCTTGTGAGGCCGAGATACTGTACCAGATGCAGTTCTGTGGCTTGACA CCCATACTTAGGGTACCTTATCGTCTTCCAGAAACCATTCTCTGTAAAGG CTTTGCAAGGAATCTTGCAAACAGTTATTTtgacctcctgccttcctgtA ACATACACTCATACCGGGGGAGAAGCGCTTTTACGAAACGAGTCCAAAAC GCATTTTTGGGGAGGGTTGACTACCTCTACGTTTCATTCATGTTGGATTC AAAACAAGAAAACGCGTGCAATGCATTACAAATCACACGTTCATTCCTTA TTGTTCCTGGTATGACCTTGTGCGcacgaggatgaATGGATCAACTACCG TGTCTTTCCTTGTCAAGGTCGGTCGTCTACTTGTTTGAGTACATTTCCGA TATCACAAGAAAAACGATTAGTCTAGCATCGAATATTTGGCAGTGTACGA GGCGGCGCGCACGACCGTCTTGGCAGGGAtcgtccctctccgcctcccaa CTCGTTTGCCGTGGCCCATACCTTTTTCTGTCCACCACCAAGAAACATGA CCATGAATCTCGTTTACATTTGACACCACGTCCAATGTCTTGTGAGGCCG AGATACTGTACCAGATGCAGTTCTGTGGCTTGACACCCATACTTAGGGTA CCTTATCGTCTTCCAGAAACCATTCTCTGTAAAGGCTTTGCAAGGAATCT TGCAAACAGTTATTTtgacctcctgccttcctgtAACATACACTCATACC GGGGGAGAAGCGCTTTTACGAAACGAGTCCAAAACGCATTTTTGGGGAGG GTTGACTACCTCTACGTTTCATTCATGTTGGATTCAAAACAAGAAAACGC GTGCAATGCATTACAAATCACACGTTCATTCCTTATTGTTCCTGGTATGA CCTTGTGCGcacgaggatgaATGGATCAACTACCGTGTCTTTCCTTGTCA AGGTCGGTCGTCTACTTGTTTGAGTACATTTCCGATATCACAAGAAAAAC GATTAGTCTAGCATCGAATATTTGGCAGTGTACGAGGCGGCGCGCACGAC CGTCTTGGCAGGGAtcgtccctctccgcctcccaaCTCGTTTGCCGTGGC CCATACCTTTTTCTGTCCACCACCAAGAAACATGACCATGAATCTCGTTT ACATTTGACACCACGTCCAATGTCTTGTGAGGCCGAGATACTGTACCAGA TGCAGTTCTGTGGCTTGACACCCATACTTAGGGTACCTTATCGTCTTCCA GAAACCATTCTCTGTAAAGGCTTTGCAAGGAATCTTGCAAACAGTTATTT tgacctcctgccttcctgtAACATACACTCATACCGGGGGAGAAGCGCTT TTACGAAACGAGTCCAAAACGCATTTTTGGGGAGGGTTGACTACCTCTAC GTTTCATTCATGTTGGATTCAAAACAAGAAAACGCGTGCAATGCATTACA AATCACACGTTCATTCCTTATTGTTCCTGGTATGACCTTGTGCGcacgag gatga back to top
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