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Properties
| Property Name | Value |
|---|
| Product | putative membrane permease |
| Orig transcript id | gnl|cribi|Naga_100251g7.7588.mrna |
| Orig protein id | gnl|cribi|Naga_100251g7.7588 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:12415..14568 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5064 ID=rna5064|Name=rna5064|organism=Nannochloropsis gaditana|type=mRNA|length=1150bp
ATGGTCTGTCCCTTACGTTCCCTCGTACGCGACTACAGGAGGACGCAGGG
TCTGGTGACCTCCCCGCATCGCTCTCACGGCCCCGACATGTCCTTCAAAT
GCAAGCCATCCCAGAAACCCAACAAACAATTTTGGCGCTATGCAAGCTTC
CTGGCCTTCATTGCCACTTTTCTACTTGTCCCATCTACTACCTCGTGGGC
CAGTGCGCTCCATCGAGCCTGCTACATGGCGTACGTGATGACCTACCTAG
ACACGAGTTACAGAGATGGCTCGCGAGCCTGGCCCTGGTTCCAGCGCCTG
CCAGTGTGGCGTCTTTATTGTAGATACATCAAGGGCCAGGTCATCACCAC
CGTGCCTCTCGATCCTCACCGCCAGTACATTTTTGCCACCCATCCCCACG
GGATTGCCACCTGGAACCACTTCCTGACCATGACGGACGGCTGCCGCTTC
CTCTCCAGGATCTACCCCCGCCCGCGCCTCGACCTCGGGGCCACTGTCCT
TTTCTTCATTCCCCTGGTCAAGGAGGTTTTGCTCTGGCTCGGATGCGTGG
ATGCCGGCGCCGCCACGGCAAATGCTGTACTCGAGCGAGGCTTCTCCTCT
CTCATCTACGTGGGGGGGGAGAAAGAGCAGATCCTCACCGAGCGAGGGAG
GGACCTGGTGGTGGTCCTGCCTCGCAAGGGATTCTGCAAGCTCGCCCTCC
GCTACGACTGCCCCATTGTCCCCGCGTACGCCTTCGGAGAAAACGACCTC
TACCGGACCTTTAAATATTTCAAGGGCCTCCAGCTCTGGGTGGCGCGCGC
GCTCAAGCTGGCCTGTCCCCCGTGCTGGGGCTTCCCGCTCCTCCCCTTCC
TGCCCCTGCCCGCGCCCGTGACCGTGGTGATGGGCGCGCCGCTCTCCCCC
AGGAGGGAGGGAAGGGCGGGGGGGGACGTGGGTGGGAGCAGGGGGGGGGA
GCCGACGCGGGAGGAGGTGGAGGATCTGCACGCGCGCTACGTGGAGGCGC
TGACCGCGCTGTTCGAGACCCACAAGGTCCAGTTCGGGGGCAGGGGTCCA
GGAGCCCGGCTGGAGGTCAGATGAGGCGTGCGCACGATAAGATAGTCTCA
TGCAAAGAACAAGCACAAAGTACTTCGAGTGCAGACAGGGGCCTCGGGCT back to topprotein sequence of rna5064 >rna5064-protein ID=rna5064-protein|Name=rna5064|organism=Nannochloropsis gaditana|type=polypeptide|length=312bp
MVSSEPDTSPLGSRLLPWANLGAYILNIVATSVIGTSGKVGKTNSEVSAA
YPTLFTPAGYAFSIWGLIFAMEGAFALYQLLPSVRSTPAIQKGVGPWWIL
MVLLQLGWSLSFATESIPLSMFFMVGIFLSLLALTLSLRRALPRRPSLAQ
SICLLLPFSLNFGWITAALLANANIVAVYRDSEDLASHLATAVSSCVVLG
LAALLGGFRLVDPIFCLVLVWAGTAIAKQLSAPVASISASFPPPVTQGLS
QAVFVLVGFAALAALHAAGRRVLLRRGEGEDTQGEEKEGESRQGDTGSPA
GVRAAAQALLKP back to topmRNA from alignment at CM002465.1:12415..14568+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5064 ID=rna5064|Name=rna5064|organism=Nannochloropsis gaditana|type=mRNA|length=2154bp|location=Sequence derived from alignment at CM002465.1:12415..14568+ (Nannochloropsis gaditana)
GGAGGTCACCAGACCCTGCGTCCTCCTGTAGTCGCGTACGAGGGAACGTA
AGGGACAGACCATCTCACCTCTGTATGAATGCTGTATTCTTCCCAATCTC
TGGCATGACTTGTTCGGGCGAGGGCTGGCTTGTTTGTTTCCAGGTCCCAA
GCTCCAAGGTCGACGCCCTCGCCTGACGGCTTGAAATTCGCGAGGTTCCC
CCTCATGGGGCGAGAAGAGCGTGTCTTTCGCACGGAGACCCATTTTGGAA
CACAAATTTCGAGTCCTGCCACTGGATTGGAAAGCGTTATCTTTCTTATC
TGAACTGCCGTGATGCACATGTGACTCTCTCGTGGCGTTTCGCCCTTTTA
CCCTCCATCCTCAGGAAGTCAAGAtactccccctccatcacaAGCACTCC
CACATGGTCTCCTCGGAGCCCGACACCTCTCCACTTGGGAGCCGCCTCCT
TCCGTGGGCTAATCTTGGTGCCTACATTCTCAATATTGTGGCGACGTCTG
TGATTGGAACCAGCGGCAAAGTGGGCAAAACCAATTCAGAGGGTACGTTC
TAGTTTGGTTCACAGTGTTGCAGAACAATGCTGAACCAGGGAGCAGGATC
CTCAGATCCTTGGCCGAACAAGTATTTTTTATTCAATCACTTTTCGATTC
TCTGTGTGAAATAATGATGGAAATTTCTCGCGTACATGCATCGCATATCT
TCAATCCTTGTGGCACCCGCGATAAGCATATGTAAAGGTCGGCTACCTCC
ACCCTATCCCTGTCCTTCAACTTGGTAAACGCCTCTGTATGCGTAGTAGC
TCTTTTTTCGCATGTCGGCGCGTAACTCACCGGCATGCCTAGTATTTCAA
GTACCACAAAACTCTTCGCGTACTCAGTCACCCCATAATCTTCCTTGAGT
TTGTCTCTGCGACCATTGTTCTTTTGTGGAACACTTTCATTGTGTGCTCg
gctccgtcctcctctatcTTGCTCACTCCGAGTTTCACGACCTCACTCTC
CTATTCATCCAGTCTCAGCTGCCTACCCGACCCTCTTCACGCCCGCCGGC
TATGCGTTCTCCATCTGGGGACTCATCTTCGCCATGGAAGGCGCCTTCGC
CCTCTATCAGCTCCTGCCCTCTGTCCGCAGCACCCCCGCAATCCAGAAGG
GCGTTGGGCCGTGGTGGATCCTCATGGTGCTCTTGCAGCTTGGctggtcc
ctctccttcgccactgagtccatccccctctccatgTTCTTCATGGTCgg
catcttcctctccctccttgccctcaccctctcccttcgccgggccctcc
cccggcgtccctctctcgcccaGTCCAtctgcctgctcctccccttttcc
ctcaatTTCGGCTGGATCACCGCTGCGCTCCTCGCCAACGCCAACATTGT
GGCCGTCTATCGGGACTCGGAGGACCTTGCCTCCCACCTGGCcaccgccg
tctcctcctgcgtgGTACTGGGCCTCGCCGCCCTGCTCGGGGGCTTCCGC
CTCGTCGATCCGATCTTCTGCTTGGTCCTTGTCTGGGCGGGCACGGCGAT
CGCCAAGCAGCTCTCGGCGCCCgtggcctccatctccgcctctttcccgc
ctccagtCACTCAGGGCTTGAGCCAGGCTGTGTTTGTGCTGGTCGGTTTc
gccgccctggccgccttgcACGCTGCGGGCAGGAGGGTGCTGCTCaggcg
tggggaaggggaggatacgcagggggaggaaaaggagggcgagagcaGGC
AGGGGGACACAGGGTCGCCGGCGGGCGTGCGAGCAGCGGCCCAGGCGCTG
CTGAAACCctgaggcgggaggggttgAAGAAGATGGGGGTGTGGCGgtga
cggagagggaagaattgTAGCTAGCATGCGCAAATAGataggaaggaggt
ggttcATGGGAAAGGTGGGTCGTGGTAATGTGCAAGTGGATGGCGAGGAA
ACGAAGTGTTCTGGAGATAGGTGGGGGGTGACTCGGGACGGTGTATGGGA
TGGTCGAAGAGAGGCAGTTGTAGTTGCAAttgaaaaagaaataaaagcaA
TGCCATTGCGCCAAGCCTGCTCAGATGGTCGATGGCGTTTAACGCTGCAA
TGTCGATGTCGCCGAAAGTTGCTTTTGGCAAACCTCGAAGTCCTgtcgga
ggga back to topCoding sequence (CDS) from alignment at CM002465.1:12415..14568+ >rna5064 ID=rna5064|Name=rna5064|organism=Nannochloropsis gaditana|type=CDS|length=1878bp|location=Sequence derived from alignment at CM002465.1:12415..14568+ (Nannochloropsis gaditana)
ATGGTCTCCTCGGAGCCCGACACCTCTCCACTTGGGAGCCGCCTCCTTCC
GTGGGCTAATCTTGGTGCCTACATTCTCAATATTGTGGCGACGTCTGTGA
TTGGAACCAGCGGCAAAGTGGGCAAAACCAATTCAGAGGTCTCAGCTGCC
TACCCGACCCTCTTCACGCCCGCCGGCTATGCGTTCTCCATCTGGGGACT
CATCTTCGCCATGGAAGGCGCCTTCGCCCTCTATCAGCTCCTGCCCTCTG
TCCGCAGCACCCCCGCAATCCAGAAGGGCGTTGGGCCGTGGTGGATCCTC
ATGGTGCTCTTGCAGCTTGGctggtccctctccttcgccactgagtccat
ccccctctccatgTTCTTCATGGTCggcatcttcctctccctccttgccc
tcaccctctcccttcgccgggccctcccccggcgtccctctctcgcccaG
TCCAtctgcctgctcctccccttttccctcaatTTCGGCTGGATCACCGC
TGCGCTCCTCGCCAACGCCAACATTGTGGCCGTCTATCGGGACTCGGAGG
ACCTTGCCTCCCACCTGGCcaccgccgtctcctcctgcgtgGTACTGGGC
CTCGCCGCCCTGCTCGGGGGCTTCCGCCTCGTCGATCCGATCTTCTGCTT
GGTCCTTGTCTGGGCGGGCACGGCGATCGCCAAGCAGCTCTCGGCGCCCg
tggcctccatctccgcctctttcccgcctccagtCACTCAGGGCTTGAGC
CAGGCTGTGTTTGTGCTGGTCGGTTTcgccgccctggccgccttgcACGC
TGCGGGCAGGAGGGTGCTGCTCaggcgtggggaaggggaggatacgcagg
gggaggaaaaggagggcgagagcaGGCAGGGGGACACAGGGTCGCCGGCG
GGCGTGCGAGCAGCGGCCCAGGCGCTGCTGAAACCctgaATGGTCTCCTC
GGAGCCCGACACCTCTCCACTTGGGAGCCGCCTCCTTCCGTGGGCTAATC
TTGGTGCCTACATTCTCAATATTGTGGCGACGTCTGTGATTGGAACCAGC
GGCAAAGTGGGCAAAACCAATTCAGAGGTCTCAGCTGCCTACCCGACCCT
CTTCACGCCCGCCGGCTATGCGTTCTCCATCTGGGGACTCATCTTCGCCA
TGGAAGGCGCCTTCGCCCTCTATCAGCTCCTGCCCTCTGTCCGCAGCACC
CCCGCAATCCAGAAGGGCGTTGGGCCGTGGTGGATCCTCATGGTGCTCTT
GCAGCTTGGctggtccctctccttcgccactgagtccatccccctctcca
tgTTCTTCATGGTCggcatcttcctctccctccttgccctcaccctctcc
cttcgccgggccctcccccggcgtccctctctcgcccaGTCCAtctgcct
gctcctccccttttccctcaatTTCGGCTGGATCACCGCTGCGCTCCTCG
CCAACGCCAACATTGTGGCCGTCTATCGGGACTCGGAGGACCTTGCCTCC
CACCTGGCcaccgccgtctcctcctgcgtgGTACTGGGCCTCGCCGCCCT
GCTCGGGGGCTTCCGCCTCGTCGATCCGATCTTCTGCTTGGTCCTTGTCT
GGGCGGGCACGGCGATCGCCAAGCAGCTCTCGGCGCCCgtggcctccatc
tccgcctctttcccgcctccagtCACTCAGGGCTTGAGCCAGGCTGTGTT
TGTGCTGGTCGGTTTcgccgccctggccgccttgcACGCTGCGGGCAGGA
GGGTGCTGCTCaggcgtggggaaggggaggatacgcagggggaggaaaag
gagggcgagagcaGGCAGGGGGACACAGGGTCGCCGGCGGGCGTGCGAGC
AGCGGCCCAGGCGCTGCTGAAACCctga back to top
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