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Properties
| Property Name | Value |
|---|
| Product | sugar nucleotide epimerase |
| Orig transcript id | gnl|cribi|Naga_100154g10.6615.mrna |
| Orig protein id | gnl|cribi|Naga_100154g10.6615 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:801380..802442 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4970 ID=rna4970|Name=rna4970|organism=Nannochloropsis gaditana|type=mRNA|length=6666bp
ACACACATCATAGGGTTAGTGTGAGCGTGAATGCTGACGTCGACTGTATT
AAAGTAGCCACCGCATACATGCTCGCCATGGAGGAAGCAGACTTGCAGTA
GCCAAGACCTTTCAACCCATTTAGGCCCAATCATGGTCTGGCCCAGGGCA
CTTTAGTGGCTTCAATTCCGATTTTTCACTTCACATGGGAAATGTTGGAA
GCGTTGGTAGCGGGTCTAGCAATGTGCTGCCGATCTCATCAACCCTGGTC
ATAGCAGGGCATGCCCTCCGAGTCAAGTCTTGCTTAGGCGCCGGTGGGAC
TGGGACCGTATACTTGGCCGAGGATGAAGCGCGGCGAAAATTTGCGATCA
AAGTCAACCGTGTGCCTAAAGGGGATGTGGCGATGAACAAGGCGGCGGAG
ATGGAATTGGAGCAGCATGCCAGGCTCCCCCCGCATCCCCACCTTATCAC
ATACATAGGCTCGCGTATTGAACACGTGTCACCTGCAGGCGGAGAAGGCG
GTGCCAATACCGGCAAAGGAGGCTTCACGCTTTATTATCTCTTGACTGAA
TACTGCCCCAGCACGGTGCACGTCTTGTTGGAAGGTGCTGAGCGCCGCAA
AGAACCCTTGGCCGAGCGGGACGTCCTCAACGTCTTCACTTCCGCCTGCG
CCGCCCTTGTCCACCTCCACGCCCATGGCCTCGCCCACCGGGATGTCCGG
GTGGAGAACTTGGTGTTGTCGACGGAAAGCAATGGGCAGCGGGTCAAACT
CTGCGGTCTGGGGGCCAGTACAATGGAGACTGGGCCCCTGCGGAACAGCG
CCGAGGTGGAGATCGCGCGAGAGGACATCGAACGACACACACGCCTGGCC
TACCGGAGCCCGGAGCAGGTGGATTTATACTCGCAGCAGCCCGTGGGTGT
GCCTGTGGACGTGTGGGCGCTAGGAGTGCTGCTCTATCGGCTCTGTTGGC
GGGTCACCCCCTTCGAGGACAAGGCCGGCATGGTCCTTCCCATGGCCATC
TTGAACGGAATGTACGTCGTCCCTCCCTCCCTCCCCATCCCTGGCACGAA
TGGGCAGCAGTCCTTCCCGCCCTATTCTCCCGGTTTGGTGACCCTGCTCC
AGTGTTGCTTGCAGCCCCGTCCCCAAGACCGGGCCACGGCAGCCGAGGTT
TTGGAAAAAGTGCGCGAACTCATGGCGAGTGGAGAAATCGGCCGCCACGT
CGACCTCCCCGCCCTTGGCCCTCTCCTTCCGTGTCCTGCTCCTTTGCCAC
TGGGTTGCTCCGCGTCGCCGTCGCCGTCGCCGTCCGGGGCTTCGCACCCG
CGGAAGGGGGGAAAGAAAGGGAGAGCGAGCGGCACCTGCCCAGGGGAACG
GGGGCCGGGAGAAGAGGATTTCCTGGGGCTGTACGACACGGCCACGCCAC
CAGACAAGGCCGCCCTGCGGGCGAGTCGACCGCAGGCTCCTCCCCCCACG
TCCCTCTCGTCCTTGGAAGACATGCTCGGGCCCCCGGCCCGGTGGCCACG
GACCAGGCCCGGGGTAGGGGGGGGCGGAGAGGAGGCCGGCCGCCTGGCGT
CCCGGGACCGGGGGGAGGGAAGCAGGACGTCGACTCTGTCGGGCTCCCTG
TCGGCGAGCTCCTCCCCTTCCCACCTGGTTGGGCTCGAGCGACACGGGAG
TGTGCCTGGGCGATGCCGGGAAGGAGGCGAGGCTAGCAAAGGGCTGGGGT
CCCGAAGCCTGAGCTTCGTGGGCATGGGCCAGGCGCTGTCGATCTGGGAG
GAGGATGAACGTTTGCGACGGCGGGGATGGGAAGAATGCGACCCGGAGCA
GGGGAAGGGAGGTATGGAGGGGTCGAGGCGTAGGGGGGGAGTGAAGACGA
AGGGCGACATGCGCCCTCGGAGGAGCAGCAGCAGCATTGGGAGCGGGAGC
AGCAGTTTGGGCCTCAAGGCGGCCAGGCAGGTGTGGGGGCTGAGCCGGGG
GACGAGCGTGGGCGGAGTGGAGGCGGTGGACCCGAAGGGCCCGGGTGTTG
AGGCGAAGGATGATGGTATGGACCTGGCAGAGCTGGCGACAGTGGACCGA
AGCGCCGCCCCCCTCCCACGCATGCTGCCCTTGGGCGCCCTGGTGGGCGA
GGGCTCGGGCGCGATGCCTCGTTCCTCCTCCGCGTCCTCCTTGAAGAGCT
TGGACGACGAGCCGAGCGGCCGCCCGCCCGCCAAGGGGGCCCTCTCGGCG
CTCTGGCACCGGCGGATGCGGTCCATCATGGGGGCCAAGGGGGAGACGGG
GAAGAAAAGTTGGGTGGTCAAGGCAACGAGCAAGGAGGCAGGGCAGCCCA
AGGCCAAGTACGTGCGGAAGCTCGTCCTGGCCGTGTGGGAGGGGGGCATG
CCGGCGTCTACTTTTTTCCTGGTCCTCTCCCAGCGCCCCGTCTTTACGAA
CCCGATCGTGGCCTTGAAGGCCTTGATCACCACCCTGAAAGTGCTTCAAC
AGGGGCCCCGCAATTTTCTGGCGACGTGCACCCCCTGCATGGGGGTGTTG
GCGGACATGGGCCGGCGGTGGGAAGAGATTGGGAGCCGCGTGGCCAGCGA
CCCTTTGGAGGAGCAGCTCCCGCCCGCCGCCCGCGCCGAGGGCTACACCA
CGCTATCCACGGCATTGACCACGCCCGCGTCGACACCGGCGTCTTCAGGG
GCCTCGGGCGGATCCCACGCGTTGGGGGCAGGGTACACGGCCCCTCCGAG
CCAACAGCACAAGCGCCAGCACGTGGACGGGGCGTCGCTCAACTTGTTGG
CGCGACTTTCCCGTCTCTTGGTGCAGAAATTGCACTTCCACAAGGCCCAC
CCTGCCTTCGCCATGCATTTTACCGCCATTCCCACCATGCTTGGCTACGA
GACCGTCCCCGTCTCGGGGCAGGAGGAGGACTTACAGGCGCTCACGCGGC
TCTTGACCATGCAGGAATCCCTGCTCCAAACCACGGGTTTCCTCTTCGCC
GTCCAGAACGAGTCCGTCGCCGTCACCGCGCGCTGGGCCCGCCTGCCCTT
GATCGAAGAGGCCTACACCATCTTCGTGGCCTGCACCTTCCTCCTGGCCT
CCTTGCTCGAGATCTCCGCCCGGGCGTCGGCCGGGCTCCCCCTCCCCTTC
CTCCTTCCCGCCCTCCCCCATGAACGCCCCAAGGAGATGGGCGCCACTGC
CTCGAGTCAAGGCATCCTCCCTCTTTCCTCCTCCTCGTCCTCGCCCCCCG
ATCCTCCCACCCTCCTCCACCGCTCCACCGGTCCAAGGGAGGCGCGCTCC
CACTCGCAAGAGAAGGATCATCTCCGACAAGACAGCGTCCCCCTTCCCCC
CCCGGTGGACTGGCGCGAGCGCGTATCCATCCTTTTGGCCTTACGTGAGC
AGTACGAATCGCAGCTCCAGGCCCTTCGTGTCTTTTATAGGGCCGCGGAG
GAGGTGGTGGAGGTGCGCAACATGAAGAGGATGCCGATCCTCCCTGTCCG
GGATCCAGTGGCCTTCGACGGTGCCCTCTGCTGGAAGCCATTGACCATGC
GCAGCCCCATGCGAGGACTCGGGCTCCTGGATCGGGCGAGGATGAACGAG
GAGGGGGAGAAAGGGAGGGGGAGGAAGGGGCAAGGAGGGGATACGCGGAT
GCCTCGGAGGTTGGGGTCGGACGGAGAGCCGGTAGGGGGGCCTCCCTCGT
TGCCTTCCTCCCTGGAAAGCACTACGTTCTCTGACACTACCGGTCTGACC
AAGGCCCGAGACACTGCACCCTGGCCGAACGCGGCCCCGGCGGCAGGGGG
AAGCGTCGCTGGGGCGGCAACCCCCCCTCCTAGACAGGCCACCCCCTCCC
CCTCCCCCTCCACGGGCGTGCTGCCCCTCACTCCCGCCAATCTCACGCCC
CTCCGCCGTCCCTCTCAGGCCTCTTCCCCCCTCTCCACCGCCCCGATGCC
CTCCCCCCCTGTCCTCCCTCCCCCCCTCCCTCCCGCCAGCCTGACCGCAG
GGTGGGAGACGTTTCACGATACTGTGGGCTTTTCCTCCTCCTCCTCCGCC
GCTTCCTCTGCCCGCCCCTCACCCACGCCTGGGGCCTCATCCCATCAAAT
ACCTCCTACCCCGTCTCCGCCCGTGCCGTCTTCAAGCATTCCTCAGCTTT
TTTCTCAGCGGAAGGAAGAGCAGGTGGAGGAGCGACAGACAGTGCTACAG
CCGCTCCAACAAGAGCCACCACCACAGCCACAACCAGGACAAGAGCAACA
AGCACAGCCATCATCGCAACAACTACCGCCTGAGCAAACGCCCCTGCCGC
CACAAGGAGAGGAAGGAAGTCCCCTCAAAGAAAGAGAGGAGGGTGACGAC
CAAGGGAAACCACCCTATCCACTACCCACCTTCCTCTCCTCTAGTGCAGC
CCCCCCCCAGCCCCCCCTTCTCTCGGCCTCCTCTCTTTTGTCCTCCTCAC
GACTGTCAAGAACCTTGCCACCCTCCTTGCGTGGAGAGGCACGGGAAGGG
GAGGAAGGGAAGGAACAAGAGGTGTGGTTCATGCCGTCGAGCGTGACGGA
GGAGGAGAGCCTGCGGCGGCCATTGGGGACTGAGGGCGGGACTCGGGATG
GGAAAGGGGAGGAAAGGGGGGAGGCCAAAGGAGAGGACGGAAACGGACGT
TTGGGGGGACGGGAGGGAAGGTGGGGATCTGTAAGCGGCAGAAGGAAAAG
CAGGGGGTGGTGGAGGGAGGAAGGCGAGGAGGTATGGATCAGGTCGAGGG
AGGGTTCCGAGGGGGATGGGGAGGAGGGTGCTGGGATGCCCTCTGGCTTG
CCACAAGGGGGGCCGATGAAGGGACTACCGCCCAGGCTGTCGATGATAGA
GGATGTGGAGGGAGGGAGGAAAGGAGGGAGGGGCGGAGGGCGGGAGGGAG
GGATCGACATGAGTCGGAGGGATCTCTTGTCCTGGTCGTCGTCTTCGTCG
GAAGAAGGGGAGGAGGAAGGGGAGGAGGGGATGGCGAGTGCCACGAATGG
GAGCGGATTCCTACGAGCGGCGGCCTTCGGCTCGGCGACGGCGTCATGCC
TGACAGGCCTTGGGGGGGGGGGAGGGATCGACCCCATCCTGATAGGAGAC
AGGGAAGTGGAGGGCGAGGAGAGGCGGGCCGAGAAGATGGAGGTCGGGGC
CTGGGACGGCTTCAGTGGCCCCGTGCCTGGCGCGGGCACGAAGGAAGGAA
GACCGATACAGGAGGAGGAAGACGCCGAGAGCAAAGGGAAGAGAGGAGAG
CTCGAGTCCCTCTCGTGGGATGTCCGCCCTGCCCTCTCGAGGACCACCTT
CCTCCCGCCCACCCCTCCTCCGCACCCGCCTGCCACGCCCCCCGCCCCGC
CTCCCCCGTCCTCTTCATCCACCCCCACGGCCCCGGTGAACCCGCAGCAG
GACAAGCTCCTCCGAGCCCGGCGTCGGGAAGCGCGCACCCAGGCGTGGCG
GGCGAACTTGAAGCCAGCTGTCGCCTCGGCCCTGTCCTCGTGCCTGCACG
CGTTCCACGCCCATGGGCCCATGATTGCTCTGGACGAGATTCTCTGGGGG
GAGGTGATTGGCCACGGGGCCTTTGCCACTGTCTATCGGGCCACGGTCCA
GGGGCAGGACGTGGCGGTGAAAAAATTGGTCACTCAGAACAATCTGCCCA
TGGCGGAGAAGAGCCTCAGGGACTTCGAATCGGAAGTGGCATTGTTGCGG
GAATTGCATCATCCCAATATCATTGCCTTTGTCGGTACCTGTGTAGATCC
GGTGGCGGTTTTGACGGAATTTTGCCACCGAGGAAATCTGTTTATGGTAG
TGAATGAGAAAGGGCCGCCCTACACGGAGATAGCTTGGAGCCGACGACTG
TCGATTGCGAAGGGATTGGCCGCAGGGATGGAATATTTGCACAGTCGGGA
CCCGATTTTGATCCACCGGGATTTAAAGTCTTTGAACGTGCTCTTGAACC
GGGCATGGGTGGTCAAAATTACGGATTTTGGCTTGTCGCGTTTCAAACCG
CATTCTTTGACGGACATCATGACGATGCAGTGTGGCACCTACCATTGGAT
GGCGCCGGAGGTGATCAACTCTACCCAATACACGGAAAAGGCGGATGTGT
ACAGCTTTGGGATCATTCTGTGGGAAATAGCCGCACGAGCGATTCCTTAC
GAAGGACTGCAACCTGTCCAAGTGGTGGCCGCGGTGATCAACCGAAAAGA
AAGACCGAAATTGCCCGAAGATTGTCCCGAAGACTACAAGGCCCTGGTCC
GCTCCTGTTGGGCGCAGGAACCGGGGGACCGTCCCGGGTTCGTAGAAGTG
GTGGCACGACTGGCGGCAATGGGTGAGTAGGAGCGTAGGCGGAGGGGGAA
GGAACAAGGGAGATGCATGATCAGAATGTAATAGGAAACTGCATGGTAAA
GAAAACTGCATGGTAAAATTATGCCTGTACAGCCGCTTATCGGTGTGCTT
CGCTGCACAGGGCGCGCAGGGTGTCAGCGTTAAGATTGTGAGGACAGGGA
GAATAAGGATGGAACTCTGAGCTGGATGCATGAGTGCGGGAGTAAGAGGG
CATACTGTGCACTCCGGATGAGCACTTGGATGGAAGCATGTTACTAGATC
GACGTGTCAGACGCACGCGTGATACAGGCTTATTCCGGCGCCTTGCAACC
ACACAAGAAGACATAACACAAAGCAAATTTTGAATCGTGCCCGGGAAAGC
AACTGTCGCATATTCA back to topprotein sequence of rna4970 >rna4970-protein ID=rna4970-protein|Name=rna4970|organism=Nannochloropsis gaditana|type=polypeptide|length=235bp
MRTTVSASIYAILLTATAAPVLADFSFDKAWFHGGDGGACKTVVPQNPVN
LQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNNVAVHNYANE
GGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYD
EAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKL
RGIAVEKGFDVDVLEDVQHEGCTYRPSSEPAGLRT back to topmRNA from alignment at CM002464.1:801380..802442+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4970 ID=rna4970|Name=rna4970|organism=Nannochloropsis gaditana|type=mRNA|length=1063bp|location=Sequence derived from alignment at CM002464.1:801380..802442+ (Nannochloropsis gaditana)
ATGCGAACGACTGTGTCTGCTTCGATTTATGCCATACTTCTGACAGCAAC
CGCCGCTCCTGTCTTGGCGGACTTCTCCTTTGACAAGGTACGCTTGCTTT
TGTTCACAGGGATTATTGTACACTTCGTATGATGAACTGAAGGGCTGTAG
ATGCTTTGAAGATGCAGCATTATGTTTCGAAGGGCCAACTTTAGATTTCA
GGCGTCTCAACTGAAGCGGCAAGAGAGAGTAACCTCAAGTACCGTTTGGA
CCGCGAAGCATTCAGTGTTTACGAGAGCCAAAAATGCAATCTTTTACGAG
TGCAATCACCGTCTTTGACCCTTTACACCTTGTAGGCCTGGTTtcatgga
ggcgatggaggcgcctGTAAGACTGTGGTCCCCCAGAACCCTGTAAACTT
GCAGGAGTATGCAAGCAAACGCTGGTACATCCATCAGCAAATGGCAACAC
AAGCCGGAAATCCTAACGGAGAATGGAACTCCTGGTAGGTAGTGAGGTCT
GAAATCGCACGGGGAACAAAttggagacggaggaaatgaAAACGTGTCAG
AGGACTAGGCACGCCAATGAACTTCTCTCCCGCACACACAGTGTGTATGC
AGAGTATACAATCAAGTCCCCCAACAACGTAGCTGTTCACAACTATGCCA
ACGAAGGTGGTGTCAACAACATCATTCGCGAAGCGGACCTCTGCGCTACT
GTCCGTGATCCCGAAAATGATCCTGGTCGCTTGGCTGTTGGTCCGTGTTT
CCTTGAGTTTGCCAACCGACTGCTTTATGGACCCTACTTTATCGTGGCTT
ACGACGAAGCCGAGGGGTACGCCTTAATCTCGGGAGGTTCTCCTACGATA
CCCACAAAAGATGGGCTTTGCACGACTCAACGTGGATTCAACAATGCGGG
GCTCTGGATCTTTTCACGATCCAATGTTCGCGATGAGGCTTTGATACAAA
AGTTGCGTGGAATTGCTGTGGAAAAGGGCTTTGATGTGGACGTATTGGAA
GACGTCCAGCATGAAGGATGTACTTACCGGCCTTCGTCAGAACCTGCGGG
GCTGCGTACGTAA back to topCoding sequence (CDS) from alignment at CM002464.1:801380..802442+ >rna4970 ID=rna4970|Name=rna4970|organism=Nannochloropsis gaditana|type=CDS|length=2124bp|location=Sequence derived from alignment at CM002464.1:801380..802442+ (Nannochloropsis gaditana)
ATGCGAACGACTGTGTCTGCTTCGATTTATGCCATACTTCTGACAGCAAC
CGCCGCTCCTGTCTTGGCGGACTTCTCCTTTGACAAGGCCTGGTTtcatg
gaggcgatggaggcgcctGTAAGACTGTGGTCCCCCAGAACCCTGTAAAC
TTGCAGGAGTATGCAAGCAAACGCTGGTACATCCATCAGCAAATGGCAAC
ACAAGCCGGAAATCCTAACGGAGAATGGAACTCCTGTGTGTATGCAGAGT
ATACAATCAAGTCCCCCAACAACGTAGCTGTTCACAACTATGCCAACGAA
GGTGGTGTCAACAACATCATTCGCGAAGCGGACCTCTGCGCTACTGTCCG
TGATCCCGAAAATGATCCTGGTCGCTTGGCTGTTGGTCCGTGTTTCCTTG
AGTTTGCCAACCGACTGCTTTATGGACCCTACTTTATCGTGGCTTACGAC
GAAGCCGAGGGGTACGCCTTAATCTCGGGAGGTTCTCCTACGATACCCAC
AAAAGATGGGCTTTGCACGACTCAACGTGGATTCAACAATGCGGGGCTCT
GGATCTTTTCACGATCCAATGTTCGCGATGAGGCTTTGATACAAAAGTTG
CGTGGAATTGCTGTGGAAAAGGGCTTTGATGTGGACGTATTGGAAGACGT
CCAGCATGAAGGATGTACTTACCGGCCTTCGTCAGAACCTGCGGGGCTGC
GTACGTAAATGCGAACGACTGTGTCTGCTTCGATTTATGCCATACTTCTG
ACAGCAACCGCCGCTCCTGTCTTGGCGGACTTCTCCTTTGACAAGGCCTG
GTTtcatggaggcgatggaggcgcctGTAAGACTGTGGTCCCCCAGAACC
CTGTAAACTTGCAGGAGTATGCAAGCAAACGCTGGTACATCCATCAGCAA
ATGGCAACACAAGCCGGAAATCCTAACGGAGAATGGAACTCCTGTGTGTA
TGCAGAGTATACAATCAAGTCCCCCAACAACGTAGCTGTTCACAACTATG
CCAACGAAGGTGGTGTCAACAACATCATTCGCGAAGCGGACCTCTGCGCT
ACTGTCCGTGATCCCGAAAATGATCCTGGTCGCTTGGCTGTTGGTCCGTG
TTTCCTTGAGTTTGCCAACCGACTGCTTTATGGACCCTACTTTATCGTGG
CTTACGACGAAGCCGAGGGGTACGCCTTAATCTCGGGAGGTTCTCCTACG
ATACCCACAAAAGATGGGCTTTGCACGACTCAACGTGGATTCAACAATGC
GGGGCTCTGGATCTTTTCACGATCCAATGTTCGCGATGAGGCTTTGATAC
AAAAGTTGCGTGGAATTGCTGTGGAAAAGGGCTTTGATGTGGACGTATTG
GAAGACGTCCAGCATGAAGGATGTACTTACCGGCCTTCGTCAGAACCTGC
GGGGCTGCGTACGTAAATGCGAACGACTGTGTCTGCTTCGATTTATGCCA
TACTTCTGACAGCAACCGCCGCTCCTGTCTTGGCGGACTTCTCCTTTGAC
AAGGCCTGGTTtcatggaggcgatggaggcgcctGTAAGACTGTGGTCCC
CCAGAACCCTGTAAACTTGCAGGAGTATGCAAGCAAACGCTGGTACATCC
ATCAGCAAATGGCAACACAAGCCGGAAATCCTAACGGAGAATGGAACTCC
TGTGTGTATGCAGAGTATACAATCAAGTCCCCCAACAACGTAGCTGTTCA
CAACTATGCCAACGAAGGTGGTGTCAACAACATCATTCGCGAAGCGGACC
TCTGCGCTACTGTCCGTGATCCCGAAAATGATCCTGGTCGCTTGGCTGTT
GGTCCGTGTTTCCTTGAGTTTGCCAACCGACTGCTTTATGGACCCTACTT
TATCGTGGCTTACGACGAAGCCGAGGGGTACGCCTTAATCTCGGGAGGTT
CTCCTACGATACCCACAAAAGATGGGCTTTGCACGACTCAACGTGGATTC
AACAATGCGGGGCTCTGGATCTTTTCACGATCCAATGTTCGCGATGAGGC
TTTGATACAAAAGTTGCGTGGAATTGCTGTGGAAAAGGGCTTTGATGTGG
ACGTATTGGAAGACGTCCAGCATGAAGGATGTACTTACCGGCCTTCGTCA
GAACCTGCGGGGCTGCGTACGTAA back to top
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