EWM25717.1, cds4958 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|585107577|gb|EWM25717.1| (sugar nucleotide epimerase [Nannochloropsis gaditana]) HSP 1 Score: 491.115 bits (1263), Expect = 8.997e-176 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query: 1 MRTTVSASIYAILLTATAAPVLADFSFDKAWFHGGDGGACKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNNVAVHNYANEGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTYRPSSEPAGLRT 235
MRTTVSASIYAILLTATAAPVLADFSFDKAWFHGGDGGACKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNNVAVHNYANEGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTYRPSSEPAGLRT
Sbjct: 1 MRTTVSASIYAILLTATAAPVLADFSFDKAWFHGGDGGACKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNNVAVHNYANEGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTYRPSSEPAGLRT 235
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|1129200395|gb|OLQ03644.1| (hypothetical protein AK812_SmicGene13373 [Symbiodinium microadriaticum]) HSP 1 Score: 161.77 bits (408), Expect = 8.556e-42 Identity = 87/180 (48.33%), Postives = 115/180 (63.89%), Query Frame = 0
Query: 50 NLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPN-----NVAVHNYANEGGVNNIIREA--DLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGC 222
+L + SKRWYI QQM T+ P + N CVYAEY ++ +VAVHN+A E + + ++ +CA V D + G+L V PCFL A L GPY++V YDE GYALISGG+PT+P ++G C T G N++GLWIF+R RDEAL+QK+R IA +KGFD+ VL DV C
Sbjct: 1924 DLDSFISKRWYIQQQMETKY-LPKSQ-NRCVYAEYKLEPKKTLLGYDVAVHNHAEEVAPPHTVHDSGSKICAKVVDKAH--GKLEVAPCFLPSA---LAGPYWVVDYDEGAGYALISGGAPTVPAEEG-CKTGSGTNDSGLWIFTREQKRDEALVQKVRAIAAQKGFDLSVLNDVDQSDC 2095
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|1129200823|gb|OLQ03971.1| (hypothetical protein AK812_SmicGene12987 [Symbiodinium microadriaticum]) HSP 1 Score: 160.614 bits (405), Expect = 1.089e-41 Identity = 87/180 (48.33%), Postives = 114/180 (63.33%), Query Frame = 0
Query: 50 NLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPN-----NVAVHNYANEGGVNNIIREA--DLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGC 222
+L + SKRWYI QQM T+ P + N CVYAEY ++ +VAVHN+A E + + ++ +CA V D G+L V PCFL A L GPY++V YDE GYALISGG+PT+P ++G C T G N++GLWIF+R RDEAL+QK+R IA +KGFD+ VL DV C
Sbjct: 198 DLDSFISKRWYIQQQMETKY-LPKSQ-NRCVYAEYKLEHKKTLLGYDVAVHNHAEEVAPPHTVHDSGSKICAKVVDKAR--GKLEVAPCFLPSA---LAGPYWVVDYDEGAGYALISGGAPTLPAEEG-CKTGSGTNDSGLWIFTREQKRDEALVQKVRAIAAQKGFDLSVLNDVDQSDC 369 HSP 2 Score: 160.229 bits (404), Expect = 1.302e-41 Identity = 87/180 (48.33%), Postives = 114/180 (63.33%), Query Frame = 0
Query: 50 NLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPN-----NVAVHNYANEGGVNNIIREA--DLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGC 222
+L + SKRWYI QQM T+ P + N CVYAEY ++ +VAVHN+A E + + ++ +CA V D G+L V PCFL A L GPY++V YDE GYALISGG+PT+P ++G C T G N++GLWIF+R RDEAL+QK+R IA +KGFD+ VL DV C
Sbjct: 585 DLDSFISKRWYIQQQMETKY-LPKSQ-NRCVYAEYKLEPKKTLLGYDVAVHNHAEEVAPPHTVHDSGSKICAKVVDKAR--GKLEVAPCFLPSA---LAGPYWVVDYDEGAGYALISGGAPTLPAEEG-CKTGSGTNDSGLWIFTREQKRDEALVQKVRAIAAQKGFDLSVLNDVDQSDC 756
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|612386437|ref|XP_007508739.1| (predicted protein [Bathycoccus prasinos] >gi|412992112|emb|CCO19825.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 129.798 bits (325), Expect = 1.746e-33 Identity = 79/202 (39.11%), Postives = 107/202 (52.97%), Query Frame = 0
Query: 26 SFDKAWFHGGDGGA--CKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNNVAVHNYANEGGVNNIIREADLCATVRDPEND-PGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTY 224
SF GG G C V + V+++ YASK WY+ Q+ + + CV A YT+ SP + V N+A +G V D+ P+ D +L VGP +F R LYG Y+IVAY+E EG+A+ISGG PTI DGLCTT+ G N GLW+F+R E L++ ++ A G D +L VQ GC Y
Sbjct: 32 SFVTPALAGGLGRERRCPPVPTVSDVSIEAYASKPWYVQAQLPNRYQPVENLF--CVRAVYTVTSPTTLDVFNFARKGSVEGEPSNEDMVLNAFIPDVDVKSKLKVGP---KFVPRALYGDYWIVAYEEEEGWAIISGGQPTIFVSDGLCTTESG--NQGLWLFTREKEVSEELVETMKKKANALGIDTSMLVTVQQTGCEY 226
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|157093173|gb|ABV22241.1| (lipocalin-like protein [Karlodinium veneficum]) HSP 1 Score: 125.561 bits (314), Expect = 5.870e-32 Identity = 74/178 (41.57%), Postives = 101/178 (56.74%), Query Frame = 0
Query: 50 NLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTI-KSPN----NVAVHNYANEGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGC 222
+L+ Y S +WYI QQM ++ +CV AEY++ SP N+ V N+A + +CA V + G+L V PCFL L GPY+IVA+D+ G+AL+SGG+P +G C T G N++GLWIF+R RD+AL+QK+RGIA KGFDV V D C
Sbjct: 40 DLKWYTSSKWYIQQQMIISY--LPADYLNCVTAEYSLLDSPTLLGYNIKVMNHAENKDGKPLGPLTTICAKVVN--ETAGKLEVSPCFLP---TFLAGPYWIVAFDKEAGWALVSGGAPKNQGTNG-CQTGTGTNDSGLWIFTRKPDRDDALLQKVRGIAAAKGFDVSVFRDTDESTC 209
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|303283094|ref|XP_003060838.1| (hypothetical protein MICPUCDRAFT_41142 [Micromonas pusilla CCMP1545] >gi|226457189|gb|EEH54488.1| hypothetical protein MICPUCDRAFT_41142 [Micromonas pusilla CCMP1545]) HSP 1 Score: 120.553 bits (301), Expect = 9.456e-30 Identity = 85/213 (39.91%), Postives = 115/213 (53.99%), Query Frame = 0
Query: 34 GGDGGA----CKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNNVAVHNYANEGGVNNIIREAD---LCATVRDPENDP--GRLAVGPCFLEFANRLLYGPYFIVAYDEAE----------GY--ALISGGSPTIPT-KDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTY 224
GG GA C V +P +L YA+ WY+ QQ + P E CV A Y + + V V+N AN GGV+ + +D L A + +D +L VGP FL R LYGPY++VA +E GY A++SGG PTIPT DG C T G N++G W+F+R + EA ++++R +A EKGFD+ LE V HEGC Y
Sbjct: 32 GGRRGAAAEPCAPVSTASPFDLDAYAAHAWYVQQQQVVRY-QPR-ESLYCVRASYRVNDDDAVDVYNTANVGGVDGPPQNSDGFRLRAVIDPDADDDAPSKLRVGPRFLP---RFLYGPYWVVAVSPSEPRDESDPVGPGYDWAIVSGGQPTIPTGDDGKCRTGSGQNDSGFWLFTREKIASEATLEEMRAVASEKGFDLSALEPVTHEGCEY 239
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|1129202794|gb|OLQ05539.1| (hypothetical protein AK812_SmicGene11295 [Symbiodinium microadriaticum]) HSP 1 Score: 124.405 bits (311), Expect = 7.612e-29 Identity = 77/181 (42.54%), Postives = 96/181 (53.04%), Query Frame = 0
Query: 47 NPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPN-----NVAVHNYANEGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGC 222
N +L + SKRWYI QQM T+ P + N CVYAEY ++ +VAVHN+A EG V D R G ++ YDEA GYALISGG+PT+P + G C T G N +GLWIF+R RDEAL+QK+R IA +KGFD+ VL DV C
Sbjct: 198 NNFDLDSFISKRWYIQQQMETKY-LPKTQ-NRCVYAEYKLQQKKTFWGYDVAVHNHA-EGVV------------------DKAR----------------GKLEVLDYDEAAGYALISGGAPTLPAEAG-CMTGSGTNGSGLWIFTREQKRDEALVQKVRAIAAQKGFDLSVLNDVDQSAC 340
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|1072225451|gb|OEU10198.1| (apolipo protein D [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 115.161 bits (287), Expect = 1.036e-27 Identity = 78/209 (37.32%), Postives = 108/209 (51.67%), Query Frame = 0
Query: 39 ACKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNN-----VAVHNYA--NEGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAY----DEAEGYALISGGSP--TIPTKD--------GLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTYRP 226
C TV + NL +YAS W++ QQ A P + N CV A+Y++K +N + V NY ++GG + DLCA ++ P +L V PCFL ++ GPY+IVAY D +GYAL+SGG P +P + C T G NN+GLWI +R ++Q++R IA +KGF VL DV H CT P
Sbjct: 27 TCLTVTTVDNFNLTQYASAPWFVQQQ-AVNTYTP-LDLNRCVTAQYSLKEHSNFWGYTIDVFNYGVKSDGGQST---GGDLCADYN--KDIPSQLKVAPCFLP---KIFAGPYWIVAYQEETDNNDGYALVSGGQPRNLVPNESTCGENGTAACCKTGDGVNNSGLWILTRQPTPSNDILQEVRTIAQQKGFSTSVLFDVDHTNCTDIP 225
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|922858774|gb|KOO26867.1| (apolipoprotein d lipocalin [Chrysochromulina sp. CCMP291]) HSP 1 Score: 111.694 bits (278), Expect = 7.830e-27 Identity = 75/197 (38.07%), Postives = 98/197 (49.75%), Query Frame = 0
Query: 39 ACKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYT--------IKSPNNVAVHNYAN---EGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTY 224
AC T+ +NL E+ +K WYI QQ T+ N + CV A Y K P V V+NYAN G N R LCA + +D +LAV PCFL A GPY+++A +A++SGG PT DG T Q G N++GLW+FSR+ V + I ++ I KG L V HEGC Y
Sbjct: 13 ACPTIHTLGQLNLTEWTAKSWYIQQQQVTEYLQRNTFY--CVTATYNQEGATVPGFKGPV-VTVYNYANLNKVNGPNQNARNMTLCARAVN-SSDYSQLAVAPCFLPNAAA---GPYWVIARAPDYAWAIVSGGQPTEQFDDGCTTKQTGINDSGLWLFSRTPVAPDEQITTMKSILEAKGIARSQLLPVAHEGCVY 202
BLAST of EWM25717.1 vs. NCBI_GenBank
Match: gi|255078300|ref|XP_002502730.1| (hypothetical protein MICPUN_59023 [Micromonas commoda] >gi|226517996|gb|ACO63988.1| hypothetical protein MICPUN_59023 [Micromonas commoda]) HSP 1 Score: 112.464 bits (280), Expect = 1.072e-26 Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 0
Query: 39 ACKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSP-NNVAVHNYANEGGVNNI---IREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAY-----DEAEGY--ALISGGSPTIPT--KDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTY 224
ACKTV ++L+ YA+ WY+ +Q + + + CV A YT+ + V V N A GGV+ R L A + D + +L VGP FL R YGPY+IVA D GY A++SGG+PT T ++GLC+T N++GLW+F+R +++++R A + GFD VL+ V EGC Y
Sbjct: 46 ACKTVNTVEGLDLRAYATHPWYVQEQQVVRYQPLDNFY--CVRARYTVDDAGDEVEVLNSARRGGVDGDDTNARGTRLRAVLEDKDASTSKLLVGPAFLP---RFTYGPYWIVAVSPDAPDPELGYEWAIVSGGAPTRLTDPENGLCSTGEDMNDSGLWLFTREPTVGADVVERMRATARDAGFDTSVLKPVTQEGCEY 239 The following BLAST results are available for this feature:
BLAST of EWM25717.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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