EWM25744.1, cds4946 (CDS) Nannochloropsis gaditana

Overview
NameEWM25744.1
Unique Namecds4946
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:767872..768030 -
Alignment locationCM002464.1:767624..767794 -
Alignment locationCM002464.1:767266..767377 -
Alignment locationCM002464.1:766951..767150 -
Alignment locationCM002464.1:766500..766750 -
Alignment locationCM002464.1:766022..766247 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25744.1
Producteukaryotic translation initiation factor 2 subunit alpha
Orig transcript idgnl|cribi|Naga_100087g4.1124.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:767872..768030 -
CM002464.1supercontigCM002464.1:767624..767794 -
CM002464.1supercontigCM002464.1:767266..767377 -
CM002464.1supercontigCM002464.1:766951..767150 -
CM002464.1supercontigCM002464.1:766500..766750 -
CM002464.1supercontigCM002464.1:766022..766247 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0003676nucleic acid binding
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005850eukaryotic translation initiation factor 2 complex
Vocabulary: INTERPRO
TermDefinition
IPR024055TIF2_asu_C
IPR003029Rbsml_prot_S1_RNA-bd_dom
IPR011488TIF_2_asu
IPR024054TIF2_asu_middle
IPR012340NA-bd_OB-fold
IPR022967S1_dom
Homology
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|585107606|gb|EWM25744.1| (eukaryotic translation initiation factor 2 subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 764.992 bits (1974), Expect = 0.000e+0
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
Query:    1 MTCHTCGCEGLPVLRVPPLAASPPTHHILQHFTSVSAQGFLILHCSIRAAKIMASDGEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPEDA 372
            MTCHTCGCEGLPVLRVPPLAASPPTHHILQHFTSVSAQGFLILHCSIRAAKIMASDGEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPEDA
Sbjct:    1 MTCHTCGCEGLPVLRVPPLAASPPTHHILQHFTSVSAQGFLILHCSIRAAKIMASDGEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPEDA 372          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|1072235869|gb|OEU20597.1| (eukaryotic translation initiation factor 2 subunit alpha [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 368.622 bits (945), Expect = 1.935e-123
Identity = 186/302 (61.59%), Postives = 232/302 (76.82%), Query Frame = 0
Query:   71 LQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSSE-VEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            L CRFYE +YP  ES+VMV V NIADM A V LLEY+ IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CEERYNKAKAVH V+RH+A     +LED+ +K+ WPLY+K+GHAFDAF  S+  E      D F  LDI   +K  + TYI RRLAP+PIKIR+DI+V+CF YEGI+A+RAAL AG++       V+I+LIAPP+YV++T TLE+++G+  LNQVIE I+ +I +  G++++KM PK VS ++E +LQ M++R   ENEEVDGDA ED
Sbjct:   40 LHCRFYENKYPEIESVVMVNVRNIADMGAYVSLLEYDGIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVQACEERYNKAKAVHGVMRHLATQRKYYLEDVYEKIGWPLYKKYGHAFDAFKLSISEEKG--VGDPFEDLDIPQGLKDELKTYILRRLAPQPIKIRSDIEVSCFTYEGIDAIRAALFAGMDLGSEQNPVKIRLIAPPLYVLSTTTLEKEVGVGLLNQVIEVIKEKITSKGGKIDVKMAPKAVSVKEETELQEMMERFALENEEVDGDAQED 339          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|1210514153|dbj|GAX26935.1| (translation initiation factor 2 subunit 1 [Fistulifera solaris])

HSP 1 Score: 365.54 bits (937), Expect = 2.188e-122
Identity = 183/302 (60.60%), Postives = 232/302 (76.82%), Query Frame = 0
Query:   71 LQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPC-SSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            L CRFYEE+YP  ES+VMV V NIADM A V L+EY++IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CE+R+NKAKAVH VLRHVAD     LEDL +++ WPLY+K+GHA+DAF   L    D    D FA +D+  ++K  I +YI RRLAP+P KIR+DI+V+CF YEGI+A++AAL AG+     +S ++IKLIAPP+YV++T TLE+D+GI  LN  I  I+  I +  G+L++KM PKVV  ++E +L+ MI R+  EN+EVDGDAPE+
Sbjct:   35 LTCRFYEEKYPEIESVVMVNVRNIADMGAYVSLMEYDNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVAACEDRFNKAKAVHGVLRHVADRRKYHLEDLYERIGWPLYKKYGHAYDAF--KLAISDDKTVADPFADIDVPQDLKDEIKSYILRRLAPQPTKIRSDIEVSCFTYEGIDAIQAALSAGMAVATDNSPIKIKLIAPPIYVLSTTTLEKDVGIALLNDAIAAIKEVITSKGGKLDVKMAPKVVGDKEENELEEMINRLNMENQEVDGDAPEE 334          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|219116562|ref|XP_002179076.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409843|gb|EEC49774.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 362.459 bits (929), Expect = 1.981e-121
Identity = 185/307 (60.26%), Postives = 235/307 (76.55%), Query Frame = 0
Query:   66 DESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPC-SSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            D+ + L+CRFYE +YP  ES+VMV V NIADM A V L+EY +IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CEER+NKAKAVH VLRH+AD    +LEDL +K+ WPL RK+GHAFDAF  ++  E      + F  LDI  ++K  + TYI RRLAP+PIKIR+DI+V+CF+YEGI+A+R AL AG+     +S ++IKLIAPP+YV++T TL++D GI  L+  I+ IR  I    G++++KM PK VS ++E +LQAM+ R+  ENEEVDGDAPE+
Sbjct:   15 DDKSNLECRFYESKYPEIESVVMVNVRNIADMGAYVSLMEYGNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVAACEERFNKAKAVHGVLRHIADRRKYYLEDLYEKIGWPLDRKYGHAFDAFKLAISDEKG--VVNPFDELDIPQDLKDELTTYILRRLAPQPIKIRSDIEVSCFSYEGIDAIREALFAGMAKGTENSVIKIKLIAPPIYVLSTTTLDKDAGIALLHSAIDAIRDVIALKGGKMDVKMPPKAVSIKEENELQAMMDRLALENEEVDGDAPEE 319          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|1210530228|dbj|GAX11144.1| (translation initiation factor 2 subunit 1 [Fistulifera solaris])

HSP 1 Score: 362.073 bits (928), Expect = 5.226e-121
Identity = 182/302 (60.26%), Postives = 231/302 (76.49%), Query Frame = 0
Query:   71 LQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPC-SSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            L CRFYEE+YP  ES+VMV V NIADM A V L+EY++IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CE+R+NKAKAVH VLRHVAD     LEDL +++ WPLY+K+GHA+DAF   L    D    D FA +D+  ++K  I +YI RRLAP+P KIR+DI+V+CF YEGI+A++AAL AG+     +S ++IKLIAPP+YV++T TLE+++GI  LN  I  I+  I    G+L++KM PKVV  ++E +L+ MI R+  EN+EVDGDAPE+
Sbjct:   35 LTCRFYEEKYPEIESVVMVNVRNIADMGAYVSLMEYDNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVAACEDRFNKAKAVHGVLRHVADRRKYHLEDLYERIGWPLYKKYGHAYDAF--KLAISDDKTVADPFAEIDVPQDLKDEIKSYILRRLAPQPTKIRSDIEVSCFTYEGIDAIQAALSAGMAVATDNSPIKIKLIAPPIYVLSTTTLEKEVGIALLNDAIAAIKEVITLKGGKLDVKMAPKVVGDKEENELEEMINRLNMENQEVDGDAPEE 334          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|224006540|ref|XP_002292230.1| (eukaryotic translation initiation factor 2 alpha subunit [Thalassiosira pseudonana CCMP1335] >gi|220971872|gb|EED90205.1| eukaryotic translation initiation factor 2 alpha subunit [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 360.533 bits (924), Expect = 2.118e-120
Identity = 179/306 (58.50%), Postives = 233/306 (76.14%), Query Frame = 0
Query:   71 LQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPE----GDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPC-SSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            L CRFYE +YP  ES+VMV V  IADM A V LLEYN+IEG+IL SELSRRRIRSI KLIRV + EV  VLRVDK KGYIDLSKRRVSP+DV  CE+++NKAKAVH VLRH+AD    +LEDLC+++AWPLYRK+GHA+DAF  +L  E    G+    D F  LD+ P+V   +  YI+RRLAP+PIKIRAD++V+CF Y+GI+A+R AL AG+     +S ++I+LIAPP+YV++T TLE++ GI  L + I+ I  +I A  G++++KM PK VS ++E +LQAM++R+E EN EV+GD PE+
Sbjct:   32 LDCRFYEAKYPEIESLVMVNVRTIADMGAYVSLLEYNNIEGLILLSELSRRRIRSINKLIRVGRNEVAMVLRVDKDKGYIDLSKRRVSPEDVAACEDKFNKAKAVHGVLRHLADRRKFYLEDLCERIAWPLYRKYGHAYDAFKIALADEAASGGEAAENDPFTSLDVPPDVIEELKLYIRRRLAPQPIKIRADVEVSCFTYDGIDAIRDALFAGIAVGTENSPIKIRLIAPPIYVLSTMTLEKEAGIALLQKSIDVILEKISAKGGKMDVKMAPKAVSLKEETELQAMMERLELENREVEGDEPEE 337          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|301110038|ref|XP_002904099.1| (eukaryotic translation initiation factor 2 subunit alpha [Phytophthora infestans T30-4] >gi|262096225|gb|EEY54277.1| eukaryotic translation initiation factor 2 subunit alpha [Phytophthora infestans T30-4])

HSP 1 Score: 359.762 bits (922), Expect = 3.510e-120
Identity = 188/330 (56.97%), Postives = 234/330 (70.91%), Query Frame = 0
Query:   57 GEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRK--------------HGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSS-EVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            GEE+TQ    E   LQCRFYE+++P  + +VMV V +IA+M A V LLEYN+IEGMIL SELSRRRIRSI KLIRV K EVV VLRVDK+KGYIDLSKRRVSP+D+ KCEERYNKAK VH VLR VA  +HL +EDL  KVAWPLY+K              + H +D F   +  +       VF GLDI+PE+  ++   I+RRL P+PIKIRADI+VTCF YEGIEA+R+ALQAG         V++KLIAPPMYV+TT+TL++  GI+ L + IE +R  I A +G + +KMEPKVVS  +E +   MI+++E E+  VDGDAPED
Sbjct:   11 GEETTQA--QEILHLQCRFYEQRFPEIDELVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRVGKNEVVMVLRVDKEKGYIDLSKRRVSPEDIAKCEERYNKAKTVHGVLRQVAQENHLEIEDLYSKVAWPLYKKFKIETPSEDEKKVEYVHCYDVFKMGITDDA------VFEGLDITPEILTALKAQIRRRLTPQPIKIRADIEVTCFTYEGIEAIRSALQAGQNVGTEDVPVKVKLIAPPMYVMTTSTLDKQKGIQKLQEAIEAVREHITAKKGTMSVKMEPKVVSVNEEKEFLQMIEKLENESRMVDGDAPED 332          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|695457606|ref|XP_009537236.1| (hypothetical protein PHYSODRAFT_356047 [Phytophthora sojae] >gi|348667845|gb|EGZ07670.1| hypothetical protein PHYSODRAFT_356047 [Phytophthora sojae])

HSP 1 Score: 359.377 bits (921), Expect = 6.551e-120
Identity = 190/330 (57.58%), Postives = 234/330 (70.91%), Query Frame = 0
Query:   57 GEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRK--------------HGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSS-EVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            GEE+TQ    E   LQCRFYE+++P  + +VMV V +IA+M A V LLEYN+IEGMIL SELSRRRIRSI KLIRV K EVV VLRVDK+KGYIDLSKRRVSP+D+ KCEERYNKAK VH VLR VA  +HL +EDL  KVAWPLY+K              + H +D F   +    DD    VF GLDI+PE+  ++   I+RRL P+PIKIRADI+VTCF YEGIEA+R+ALQA          V++KLIAPPMYV+TT+TL++  GI+ L + IE +R  I A +G + +KMEPKVVS  +E +   MI+++E EN  VDGDAPED
Sbjct:   13 GEETTQA--QEILHLQCRFYEQKFPEIDELVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRVGKNEVVMVLRVDKEKGYIDLSKRRVSPEDIAKCEERYNKAKTVHGVLRQVAQENHLEIEDLYSKVAWPLYKKFKIETVSDDEKKVEYVHCYDVFKMGI---TDD---SVFEGLDITPEILAALKAQIRRRLTPQPIKIRADIEVTCFTYEGIEAIRSALQAAQNIGTDDVPVKVKLIAPPMYVMTTSTLDKQKGIQKLQEAIEAVREHITAKKGTMSVKMEPKVVSVNEEKEFLQMIEKLENENRLVDGDAPED 334          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|675183625|ref|XP_008900697.1| (hypothetical protein PPTG_08373 [Phytophthora parasitica INRA-310] >gi|566030655|gb|ETI53566.1| hypothetical protein F443_03481 [Phytophthora parasitica P1569] >gi|567968286|gb|ETK93429.1| hypothetical protein L915_03368 [Phytophthora parasitica] >gi|567996746|gb|ETL46848.1| hypothetical protein L916_03353 [Phytophthora parasitica] >gi|568025976|gb|ETL99977.1| hypothetical protein L917_03244 [Phytophthora parasitica] >gi|568056429|gb|ETM53141.1| hypothetical protein L914_03345 [Phytophthora parasitica] >gi|568098898|gb|ETN13616.1| hypothetical protein PPTG_08373 [Phytophthora parasitica INRA-310] >gi|570334309|gb|ETO82257.1| hypothetical protein F444_03584 [Phytophthora parasitica P1976] >gi|570958394|gb|ETP23373.1| hypothetical protein F441_03509 [Phytophthora parasitica CJ01A1] >gi|570994173|gb|ETP51361.1| hypothetical protein F442_03462 [Phytophthora parasitica P10297] >gi|970628979|gb|KUF76395.1| Eukaryotic translation initiation factor 2 subunit alpha [Phytophthora nicotianae] >gi|970646024|gb|KUF86327.1| Eukaryotic translation initiation factor 2 subunit alpha [Phytophthora nicotianae])

HSP 1 Score: 358.221 bits (918), Expect = 1.633e-119
Identity = 189/330 (57.27%), Postives = 234/330 (70.91%), Query Frame = 0
Query:   57 GEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRK--------------HGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSS-EVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            GEE+TQ    E   LQCRFYE+++P  + +VMV V +IA+M A V LLEYN+IEGMIL SELSRRRIRSI KLIRV K EVV VLRVDK+KGYIDLSKRRVSP+D+ KCEERYNKAK VH VLR VA  +HL +EDL  KVAWPLY+K              + H +D F   +    DD    VF GLDI+PE+  ++   I+RRL P+PIKIRADI+VTCF YEGIEA+R+ALQA          V++KLIAPPMYV+TT+TL++  GI+ L + IE +R  I A +G + +KMEPKVVS  +E +   MI+++E E+  VDGDAPED
Sbjct:   11 GEETTQA--QEILHLQCRFYEQKFPEIDELVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRVGKNEVVMVLRVDKEKGYIDLSKRRVSPEDIAKCEERYNKAKTVHGVLRQVAQENHLEIEDLYSKVAWPLYKKFKIETPSDDEKKVEYVHCYDVFKMGI---TDD---SVFEGLDITPEILTALKAQIRRRLTPQPIKIRADIEVTCFTYEGIEAIRSALQAAQNVGTEDVPVKVKLIAPPMYVMTTSTLDKQKGIQKLQEAIEAVREHITAKKGTMSVKMEPKVVSVNEEKEFLQMIEKLENESRMVDGDAPED 332          
BLAST of EWM25744.1 vs. NCBI_GenBank
Match: gi|1214709877|gb|OWZ21019.1| (Eukaryotic translation initiation factor 2 subunit alpha [Phytophthora megakarya])

HSP 1 Score: 357.836 bits (917), Expect = 2.610e-119
Identity = 187/330 (56.67%), Postives = 234/330 (70.91%), Query Frame = 0
Query:   57 GEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRK--------------HGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSS-EVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 371
            GEE+TQ    E   LQCRFYE+++P  + +VMV V +IA+M A V LLEYN+IEGMIL SELSRRRIRSI KLIRV K EVV VLRVDK+KGYIDLSKRRVSP+D+ KCEERYNKAK VH VLR VA  +HL +EDL  KVAWPLY+K              + H +D F   +  +       VF GLDI+PE+  ++   I+RRL P+PIKIRADI+VTCF YEGIEA+R+ALQA  +       V++KLIAPPMYV+TT+TL++  GI+ L + IE +R  I A +G + +KMEPKVVS  +E +   MI+++E E+  VDGDAPED
Sbjct:   11 GEETTQA--QEILHLQCRFYEQKFPEIDELVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRVGKNEVVMVLRVDKEKGYIDLSKRRVSPEDIAKCEERYNKAKTVHGVLRQVAQENHLEIEDLYSKVAWPLYKKFKIETVSDDEKKVEYVHCYDVFKMGITDDA------VFEGLDITPEILTALKVQIRRRLTPQPIKIRADIEVTCFTYEGIEAIRSALQAAQDIGTEDVPVKVKLIAPPMYVMTTSTLDKQKGIQKLQEAIEAVREHITAKKGTMSVKMEPKVVSVNEEKEFLQMIEKLENESRMVDGDAPED 332          
The following BLAST results are available for this feature:
BLAST of EWM25744.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107606|gb|EWM25744.1|0.000e+0100.00eukaryotic translation initiation factor 2 subunit... [more]
gi|1072235869|gb|OEU20597.1|1.935e-12361.59eukaryotic translation initiation factor 2 subunit... [more]
gi|1210514153|dbj|GAX26935.1|2.188e-12260.60translation initiation factor 2 subunit 1 [Fistuli... [more]
gi|219116562|ref|XP_002179076.1|1.981e-12160.26predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210530228|dbj|GAX11144.1|5.226e-12160.26translation initiation factor 2 subunit 1 [Fistuli... [more]
gi|224006540|ref|XP_002292230.1|2.118e-12058.50eukaryotic translation initiation factor 2 alpha s... [more]
gi|301110038|ref|XP_002904099.1|3.510e-12056.97eukaryotic translation initiation factor 2 subunit... [more]
gi|695457606|ref|XP_009537236.1|6.551e-12057.58hypothetical protein PHYSODRAFT_356047 [Phytophtho... [more]
gi|675183625|ref|XP_008900697.1|1.633e-11957.27hypothetical protein PPTG_08373 [Phytophthora para... [more]
gi|1214709877|gb|OWZ21019.1|2.610e-11956.67Eukaryotic translation initiation factor 2 subunit... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4958rna4958Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications