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Properties
| Property Name | Value |
|---|
| Product | eukaryotic translation initiation factor 2 subunit alpha |
| Orig transcript id | gnl|cribi|Naga_100087g4.1124.mrna |
| Orig protein id | gnl|cribi|Naga_100087g4.1124 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:765936..768059 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4958 ID=rna4958|Name=rna4958|organism=Nannochloropsis gaditana|type=mRNA|length=486bp
ATGGCCGCTGCTTTTGTTAAGCTTCTCCCTTGGGAAGGAAGGAAGAGGGG
GGAGTCGGGCGGTGTAATGGAAAAATTACTCGTAGGCCCCTTCTCATCTC
CCCTAAATGCATTAAGTAGATGTCTCAGCTCACCATTACATGCCAGCACG
AGGGCCTCCATCACTACCATATTATGCACAGGAAGAAACCGAATGCTCCT
GGGCTTGCTTTGTGGAGGAGTTCATTTGATACGCCAGGAACATCGTGCCT
GTCTTTGTGATCAGCGCTACCATCATCCTCATTCTCTATTTCGCTATCGT
GGCTCCCAACCGCCAGCACTAGTACCGTTCTTCTACCTCTTCCCCCCTCA
TTCCTCCCCCGCCTATCTCCGCTTTAATGACGCCCGGTTGACCCCGAAAG
CCCCACTGGAGGGCAGGGGCCGGACAGACCACGAGCAGGACGGGCGCCAA
GCAGGGCATGTGGTACAGGGGGAGGTGGGCATGTAA back to topprotein sequence of rna4958 >rna4958-protein ID=rna4958-protein|Name=rna4958|organism=Nannochloropsis gaditana|type=polypeptide|length=372bp
MTCHTCGCEGLPVLRVPPLAASPPTHHILQHFTSVSAQGFLILHCSIRAA
KIMASDGEESTQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAE
VILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYI
DLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWP
LYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLA
PKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSSEVEIKLIAPPMYV
VTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADL
QAMIKRIEEENEEVDGDAPEDA back to topmRNA from alignment at CM002464.1:765936..768059- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4958 ID=rna4958|Name=rna4958|organism=Nannochloropsis gaditana|type=mRNA|length=2124bp|location=Sequence derived from alignment at CM002464.1:765936..768059- (Nannochloropsis gaditana)
ACCAAACTGCGTCGACGCTCGGAGAGTCAATGACCTGTCACACTTGCGGG
TGTGAGGGGCTACCCGTTCTTCGTGTCCCACCTCTTGCAGCCTCCCCACC
CACCCACCACATACTACAGCATTTTACAAGCGTTAGCGCTCAAGGCTTTC
TTATTTTGCACTGCTCGATCCGTGCTGCTAAGATCATGGTACGTTTTACC
TCGCACGTTGTTTAATTTTTGCTTCTACTTTAATGCTTCCTCACATGACT
GCAATCTGTGCGCAGGCTTCAGACGGAGAGGAAAGCACGCAGATGGCGCG
GGATGAGTCCACGCGACTCCAATGTCGGTTTTACGAGGAGCAGTATCCCA
ATCCGGAGAGTATGGTCATGGTGAAAGTCATTAATATAGCTGACATGGCA
GCGGAAGTCATCTTGCTCGAATACAATGACATTGAGGTGAGGACGGAGAA
GAGGAAAGGGGAAGGAACGGGTTGCCGTGGAGCGTGCGGGGGGAAGATCA
GCCCGAGCCTTCTCGTGTAGTGCTACCCTTTTGGATGATGACGCATAGTA
TAGGGTTTCAGAGTGCTCTGCCTGCGGCCAAGAGCTGGATCCCCAGAAAG
CACTTGAAAGCGCCACGTCAACTGACTCTGTCCACCGGGCCCCTCTGACC
CTCTACATCGCTCTTGAACCGGACATTTGCAGGGTATGATCCTCCACTCC
GAGCTCTCCCGGCGTCGCATTCGATCCATCAAGAAGCTCATCCGCGTCAA
CAAGCTGGAAGTGGTCTCCGTGTTGCGGGTGGACAAGAAGAAAGGTAAGC
CTGTCACTCGGGAGGATCCCTCACACTCACGGACATGAACCCTCCCAATG
TTGCTCTGATGCGAACGCAAACAATCTTGTGCACTTCGTTTCACGCCTTT
CCTTCTCAGGGTACATCGACTTGTCCAAACGTCGCGTTTCCCCTGACGAC
GTGATCAAGTGCGAAGAGCGCTACAACAAGGCGAAAGCCGTCCACTCCGT
CCTCCGCCACGTCGCCGACATGCACCACCTCTGGCTCGAGGACCTGTGCA
AGAAGGTGGCCTGGCCTCTCTACCGCAAGCACGGGCATGCCTTCGATGCC
TTCACCAAGGTGTGTGGCCCCTGAGGTCCTCCGACCCCCATGGGGGAAAG
TTCTTGGGTCTTGGTCGCCCTGTTCCCACGCGGCCCATATCCACGCCACG
GCATCTCCTTGACCAGATGTCCCGCCACTGTACTCCGTGATCTAGCGCTG
TCGCCCCTCATCCCTCCCCCTCCCCCTCCCCCTCCCTTTCCTACGCAACC
CTCCCTCAGTCCCTCTTGCCCGAGGGCGACGACCGGTACGAGGATGTGTT
CGCAGGCCTGGACATCTCCCCCGAGGTCAAGCACAGCATCGTCACCTACA
TCAAGCGTCGTCTGGCGCCCAAGCCCATCAAGATCCGGGCAGACATCGAC
GTGACCTGTTTCGCCTACGAGGGGATTGAGGCCGTGCGGGCGGCGTTGCA
AGCGGGTTTGGAGACGCCTTGTTCGAGCGAAGTGGAGATTAAATTGATCG
CCCCGCCCATGTAAGCATATGGGAGACGGGATCCATTGGCCTGATCTTTC
TGGGTGGAGGAACAGAGCCATGTTGGATAGAAGAAACGGGCGGGAGATAC
CTCGCTTTTCTGTGACACTAGGACTGAGAAGACGCTGGTGATGGCGCCAT
CGGACCTGTGTCGTAGATGTTGCAATGACTCCCGAGGTTGCTTGACTAAT
CTCCACGCCCCATATCTCGACTTTTCATGTATCTTCTCATTGTGTCGTGC
ATCCCTGTGTAGGTATGTCGTCACCACCAACACCTTGGAACAGGACATCG
GGATCGAGAACTTGAATCAGGTCATAGAGCGGATCCGTGCGCGGATCGTG
GCAAGCGAGGGTAGACTGGAAATTAAAATGGAGCCTAAGGTGGTGAGTCA
GCGTGATGAGGCGGATCTTCAAGCAATGATCAAGAGGATTGAGGAGGAGA
ACGAGGAAGTTGACGGAGATGCCCCTGAGGACGCATGAGATGTCTTGGAG
GGTCAAGAGTATAGGCAAGCCCTGACTGACAAGAACATAAAAGAAAAAGC
AACCAAGGAACGTTACTTTGCGGC back to topCoding sequence (CDS) from alignment at CM002464.1:765936..768059- >rna4958 ID=rna4958|Name=rna4958|organism=Nannochloropsis gaditana|type=CDS|length=6714bp|location=Sequence derived from alignment at CM002464.1:765936..768059- (Nannochloropsis gaditana)
GTATGTCGTCACCACCAACACCTTGGAACAGGACATCGGGATCGAGAACT
TGAATCAGGTCATAGAGCGGATCCGTGCGCGGATCGTGGCAAGCGAGGGT
AGACTGGAAATTAAAATGGAGCCTAAGGTGGTGAGTCAGCGTGATGAGGC
GGATCTTCAAGCAATGATCAAGAGGATTGAGGAGGAGAACGAGGAAGTTG
ACGGAGATGCCCCTGAGGACGCATGATCCCTCTTGCCCGAGGGCGACGAC
CGGTACGAGGATGTGTTCGCAGGCCTGGACATCTCCCCCGAGGTCAAGCA
CAGCATCGTCACCTACATCAAGCGTCGTCTGGCGCCCAAGCCCATCAAGA
TCCGGGCAGACATCGACGTGACCTGTTTCGCCTACGAGGGGATTGAGGCC
GTGCGGGCGGCGTTGCAAGCGGGTTTGGAGACGCCTTGTTCGAGCGAAGT
GGAGATTAAATTGATCGCCCCGCCCATGGTACATCGACTTGTCCAAACGT
CGCGTTTCCCCTGACGACGTGATCAAGTGCGAAGAGCGCTACAACAAGGC
GAAAGCCGTCCACTCCGTCCTCCGCCACGTCGCCGACATGCACCACCTCT
GGCTCGAGGACCTGTGCAAGAAGGTGGCCTGGCCTCTCTACCGCAAGCAC
GGGCATGCCTTCGATGCCTTCACCAAGGGTATGATCCTCCACTCCGAGCT
CTCCCGGCGTCGCATTCGATCCATCAAGAAGCTCATCCGCGTCAACAAGC
TGGAAGTGGTCTCCGTGTTGCGGGTGGACAAGAAGAAAGGCTTCAGACGG
AGAGGAAAGCACGCAGATGGCGCGGGATGAGTCCACGCGACTCCAATGTC
GGTTTTACGAGGAGCAGTATCCCAATCCGGAGAGTATGGTCATGGTGAAA
GTCATTAATATAGCTGACATGGCAGCGGAAGTCATCTTGCTCGAATACAA
TGACATTGAGATGACCTGTCACACTTGCGGGTGTGAGGGGCTACCCGTTC
TTCGTGTCCCACCTCTTGCAGCCTCCCCACCCACCCACCACATACTACAG
CATTTTACAAGCGTTAGCGCTCAAGGCTTTCTTATTTTGCACTGCTCGAT
CCGTGCTGCTAAGATCATGGTATGTCGTCACCACCAACACCTTGGAACAG
GACATCGGGATCGAGAACTTGAATCAGGTCATAGAGCGGATCCGTGCGCG
GATCGTGGCAAGCGAGGGTAGACTGGAAATTAAAATGGAGCCTAAGGTGG
TGAGTCAGCGTGATGAGGCGGATCTTCAAGCAATGATCAAGAGGATTGAG
GAGGAGAACGAGGAAGTTGACGGAGATGCCCCTGAGGACGCATGATCCCT
CTTGCCCGAGGGCGACGACCGGTACGAGGATGTGTTCGCAGGCCTGGACA
TCTCCCCCGAGGTCAAGCACAGCATCGTCACCTACATCAAGCGTCGTCTG
GCGCCCAAGCCCATCAAGATCCGGGCAGACATCGACGTGACCTGTTTCGC
CTACGAGGGGATTGAGGCCGTGCGGGCGGCGTTGCAAGCGGGTTTGGAGA
CGCCTTGTTCGAGCGAAGTGGAGATTAAATTGATCGCCCCGCCCATGGTA
CATCGACTTGTCCAAACGTCGCGTTTCCCCTGACGACGTGATCAAGTGCG
AAGAGCGCTACAACAAGGCGAAAGCCGTCCACTCCGTCCTCCGCCACGTC
GCCGACATGCACCACCTCTGGCTCGAGGACCTGTGCAAGAAGGTGGCCTG
GCCTCTCTACCGCAAGCACGGGCATGCCTTCGATGCCTTCACCAAGGGTA
TGATCCTCCACTCCGAGCTCTCCCGGCGTCGCATTCGATCCATCAAGAAG
CTCATCCGCGTCAACAAGCTGGAAGTGGTCTCCGTGTTGCGGGTGGACAA
GAAGAAAGGCTTCAGACGGAGAGGAAAGCACGCAGATGGCGCGGGATGAG
TCCACGCGACTCCAATGTCGGTTTTACGAGGAGCAGTATCCCAATCCGGA
GAGTATGGTCATGGTGAAAGTCATTAATATAGCTGACATGGCAGCGGAAG
TCATCTTGCTCGAATACAATGACATTGAGATGACCTGTCACACTTGCGGG
TGTGAGGGGCTACCCGTTCTTCGTGTCCCACCTCTTGCAGCCTCCCCACC
CACCCACCACATACTACAGCATTTTACAAGCGTTAGCGCTCAAGGCTTTC
TTATTTTGCACTGCTCGATCCGTGCTGCTAAGATCATGGTATGTCGTCAC
CACCAACACCTTGGAACAGGACATCGGGATCGAGAACTTGAATCAGGTCA
TAGAGCGGATCCGTGCGCGGATCGTGGCAAGCGAGGGTAGACTGGAAATT
AAAATGGAGCCTAAGGTGGTGAGTCAGCGTGATGAGGCGGATCTTCAAGC
AATGATCAAGAGGATTGAGGAGGAGAACGAGGAAGTTGACGGAGATGCCC
CTGAGGACGCATGATCCCTCTTGCCCGAGGGCGACGACCGGTACGAGGAT
GTGTTCGCAGGCCTGGACATCTCCCCCGAGGTCAAGCACAGCATCGTCAC
CTACATCAAGCGTCGTCTGGCGCCCAAGCCCATCAAGATCCGGGCAGACA
TCGACGTGACCTGTTTCGCCTACGAGGGGATTGAGGCCGTGCGGGCGGCG
TTGCAAGCGGGTTTGGAGACGCCTTGTTCGAGCGAAGTGGAGATTAAATT
GATCGCCCCGCCCATGGTACATCGACTTGTCCAAACGTCGCGTTTCCCCT
GACGACGTGATCAAGTGCGAAGAGCGCTACAACAAGGCGAAAGCCGTCCA
CTCCGTCCTCCGCCACGTCGCCGACATGCACCACCTCTGGCTCGAGGACC
TGTGCAAGAAGGTGGCCTGGCCTCTCTACCGCAAGCACGGGCATGCCTTC
GATGCCTTCACCAAGGGTATGATCCTCCACTCCGAGCTCTCCCGGCGTCG
CATTCGATCCATCAAGAAGCTCATCCGCGTCAACAAGCTGGAAGTGGTCT
CCGTGTTGCGGGTGGACAAGAAGAAAGGCTTCAGACGGAGAGGAAAGCAC
GCAGATGGCGCGGGATGAGTCCACGCGACTCCAATGTCGGTTTTACGAGG
AGCAGTATCCCAATCCGGAGAGTATGGTCATGGTGAAAGTCATTAATATA
GCTGACATGGCAGCGGAAGTCATCTTGCTCGAATACAATGACATTGAGAT
GACCTGTCACACTTGCGGGTGTGAGGGGCTACCCGTTCTTCGTGTCCCAC
CTCTTGCAGCCTCCCCACCCACCCACCACATACTACAGCATTTTACAAGC
GTTAGCGCTCAAGGCTTTCTTATTTTGCACTGCTCGATCCGTGCTGCTAA
GATCATGGTATGTCGTCACCACCAACACCTTGGAACAGGACATCGGGATC
GAGAACTTGAATCAGGTCATAGAGCGGATCCGTGCGCGGATCGTGGCAAG
CGAGGGTAGACTGGAAATTAAAATGGAGCCTAAGGTGGTGAGTCAGCGTG
ATGAGGCGGATCTTCAAGCAATGATCAAGAGGATTGAGGAGGAGAACGAG
GAAGTTGACGGAGATGCCCCTGAGGACGCATGATCCCTCTTGCCCGAGGG
CGACGACCGGTACGAGGATGTGTTCGCAGGCCTGGACATCTCCCCCGAGG
TCAAGCACAGCATCGTCACCTACATCAAGCGTCGTCTGGCGCCCAAGCCC
ATCAAGATCCGGGCAGACATCGACGTGACCTGTTTCGCCTACGAGGGGAT
TGAGGCCGTGCGGGCGGCGTTGCAAGCGGGTTTGGAGACGCCTTGTTCGA
GCGAAGTGGAGATTAAATTGATCGCCCCGCCCATGGTACATCGACTTGTC
CAAACGTCGCGTTTCCCCTGACGACGTGATCAAGTGCGAAGAGCGCTACA
ACAAGGCGAAAGCCGTCCACTCCGTCCTCCGCCACGTCGCCGACATGCAC
CACCTCTGGCTCGAGGACCTGTGCAAGAAGGTGGCCTGGCCTCTCTACCG
CAAGCACGGGCATGCCTTCGATGCCTTCACCAAGGGTATGATCCTCCACT
CCGAGCTCTCCCGGCGTCGCATTCGATCCATCAAGAAGCTCATCCGCGTC
AACAAGCTGGAAGTGGTCTCCGTGTTGCGGGTGGACAAGAAGAAAGGCTT
CAGACGGAGAGGAAAGCACGCAGATGGCGCGGGATGAGTCCACGCGACTC
CAATGTCGGTTTTACGAGGAGCAGTATCCCAATCCGGAGAGTATGGTCAT
GGTGAAAGTCATTAATATAGCTGACATGGCAGCGGAAGTCATCTTGCTCG
AATACAATGACATTGAGATGACCTGTCACACTTGCGGGTGTGAGGGGCTA
CCCGTTCTTCGTGTCCCACCTCTTGCAGCCTCCCCACCCACCCACCACAT
ACTACAGCATTTTACAAGCGTTAGCGCTCAAGGCTTTCTTATTTTGCACT
GCTCGATCCGTGCTGCTAAGATCATGGTATGTCGTCACCACCAACACCTT
GGAACAGGACATCGGGATCGAGAACTTGAATCAGGTCATAGAGCGGATCC
GTGCGCGGATCGTGGCAAGCGAGGGTAGACTGGAAATTAAAATGGAGCCT
AAGGTGGTGAGTCAGCGTGATGAGGCGGATCTTCAAGCAATGATCAAGAG
GATTGAGGAGGAGAACGAGGAAGTTGACGGAGATGCCCCTGAGGACGCAT
GATCCCTCTTGCCCGAGGGCGACGACCGGTACGAGGATGTGTTCGCAGGC
CTGGACATCTCCCCCGAGGTCAAGCACAGCATCGTCACCTACATCAAGCG
TCGTCTGGCGCCCAAGCCCATCAAGATCCGGGCAGACATCGACGTGACCT
GTTTCGCCTACGAGGGGATTGAGGCCGTGCGGGCGGCGTTGCAAGCGGGT
TTGGAGACGCCTTGTTCGAGCGAAGTGGAGATTAAATTGATCGCCCCGCC
CATGGTACATCGACTTGTCCAAACGTCGCGTTTCCCCTGACGACGTGATC
AAGTGCGAAGAGCGCTACAACAAGGCGAAAGCCGTCCACTCCGTCCTCCG
CCACGTCGCCGACATGCACCACCTCTGGCTCGAGGACCTGTGCAAGAAGG
TGGCCTGGCCTCTCTACCGCAAGCACGGGCATGCCTTCGATGCCTTCACC
AAGGGTATGATCCTCCACTCCGAGCTCTCCCGGCGTCGCATTCGATCCAT
CAAGAAGCTCATCCGCGTCAACAAGCTGGAAGTGGTCTCCGTGTTGCGGG
TGGACAAGAAGAAAGGCTTCAGACGGAGAGGAAAGCACGCAGATGGCGCG
GGATGAGTCCACGCGACTCCAATGTCGGTTTTACGAGGAGCAGTATCCCA
ATCCGGAGAGTATGGTCATGGTGAAAGTCATTAATATAGCTGACATGGCA
GCGGAAGTCATCTTGCTCGAATACAATGACATTGAGATGACCTGTCACAC
TTGCGGGTGTGAGGGGCTACCCGTTCTTCGTGTCCCACCTCTTGCAGCCT
CCCCACCCACCCACCACATACTACAGCATTTTACAAGCGTTAGCGCTCAA
GGCTTTCTTATTTTGCACTGCTCGATCCGTGCTGCTAAGATCATGGTATG
TCGTCACCACCAACACCTTGGAACAGGACATCGGGATCGAGAACTTGAAT
CAGGTCATAGAGCGGATCCGTGCGCGGATCGTGGCAAGCGAGGGTAGACT
GGAAATTAAAATGGAGCCTAAGGTGGTGAGTCAGCGTGATGAGGCGGATC
TTCAAGCAATGATCAAGAGGATTGAGGAGGAGAACGAGGAAGTTGACGGA
GATGCCCCTGAGGACGCATGATCCCTCTTGCCCGAGGGCGACGACCGGTA
CGAGGATGTGTTCGCAGGCCTGGACATCTCCCCCGAGGTCAAGCACAGCA
TCGTCACCTACATCAAGCGTCGTCTGGCGCCCAAGCCCATCAAGATCCGG
GCAGACATCGACGTGACCTGTTTCGCCTACGAGGGGATTGAGGCCGTGCG
GGCGGCGTTGCAAGCGGGTTTGGAGACGCCTTGTTCGAGCGAAGTGGAGA
TTAAATTGATCGCCCCGCCCATGGTACATCGACTTGTCCAAACGTCGCGT
TTCCCCTGACGACGTGATCAAGTGCGAAGAGCGCTACAACAAGGCGAAAG
CCGTCCACTCCGTCCTCCGCCACGTCGCCGACATGCACCACCTCTGGCTC
GAGGACCTGTGCAAGAAGGTGGCCTGGCCTCTCTACCGCAAGCACGGGCA
TGCCTTCGATGCCTTCACCAAGGGTATGATCCTCCACTCCGAGCTCTCCC
GGCGTCGCATTCGATCCATCAAGAAGCTCATCCGCGTCAACAAGCTGGAA
GTGGTCTCCGTGTTGCGGGTGGACAAGAAGAAAGGCTTCAGACGGAGAGG
AAAGCACGCAGATGGCGCGGGATGAGTCCACGCGACTCCAATGTCGGTTT
TACGAGGAGCAGTATCCCAATCCGGAGAGTATGGTCATGGTGAAAGTCAT
TAATATAGCTGACATGGCAGCGGAAGTCATCTTGCTCGAATACAATGACA
TTGAGATGACCTGTCACACTTGCGGGTGTGAGGGGCTACCCGTTCTTCGT
GTCCCACCTCTTGCAGCCTCCCCACCCACCCACCACATACTACAGCATTT
TACAAGCGTTAGCGCTCAAGGCTTTCTTATTTTGCACTGCTCGATCCGTG
CTGCTAAGATCATG back to top
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