EWM25743.1, cds4945 (CDS) Nannochloropsis gaditana

Overview
NameEWM25743.1
Unique Namecds4945
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:765222..765368 -
Alignment locationCM002464.1:765035..765100 -
Alignment locationCM002464.1:764653..764925 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25743.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100087g5.1123.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:765222..765368 -
CM002464.1supercontigCM002464.1:765035..765100 -
CM002464.1supercontigCM002464.1:764653..764925 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25743.1 vs. NCBI_GenBank
Match: gi|585107605|gb|EWM25743.1| (hypothetical protein Naga_100087g5 [Nannochloropsis gaditana])

HSP 1 Score: 330.872 bits (847), Expect = 9.404e-115
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 
Query:    1 MAAAFVKLLPWEGRKRGESGGVMEKLLVGPFSSPLNALSRCLSSPLHASTRASITTILCTGRNRMLLGLLCGGVHLIRQEHRACLCDQRYHHPHSLFRYRGSQPPALVPFFYLFPPHSSPAYLRFNDARLTPKAPLEGRGRTDHEQDGRQAGHVVQGEVGM 161
            MAAAFVKLLPWEGRKRGESGGVMEKLLVGPFSSPLNALSRCLSSPLHASTRASITTILCTGRNRMLLGLLCGGVHLIRQEHRACLCDQRYHHPHSLFRYRGSQPPALVPFFYLFPPHSSPAYLRFNDARLTPKAPLEGRGRTDHEQDGRQAGHVVQGEVGM
Sbjct:    1 MAAAFVKLLPWEGRKRGESGGVMEKLLVGPFSSPLNALSRCLSSPLHASTRASITTILCTGRNRMLLGLLCGGVHLIRQEHRACLCDQRYHHPHSLFRYRGSQPPALVPFFYLFPPHSSPAYLRFNDARLTPKAPLEGRGRTDHEQDGRQAGHVVQGEVGM 161
The following BLAST results are available for this feature:
BLAST of EWM25743.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107605|gb|EWM25743.1|9.404e-115100.00hypothetical protein Naga_100087g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4957rna4957Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications