EWM25733.1, cds4938 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|585107595|gb|EWM25733.1| (dnaj heat shock n-terminal domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0 Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0
Query: 1 MARPWCFYFVQGEEGESPEEPNVFALPSNGAASLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGERPSASGTSTQTVEQGRSVKAPRERPSERQGRRQAGGKVGAPPGSTAASGDDLDRFLYGSTGSDTPASPSSSPSSRPQSRPTPHAVQGGLPRVHSSPPPVGTAASPPPPRAHSASPGPRPGPPLSAGMAGLDIDEDDSPPPPSSFPPSSSGRGGPTPPPKGPSPPPATPEELFFMQPTTTKQAEAAKEEQEADALRQRVGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVFAAKELK 488
MARPWCFYFVQGEEGESPEEPNVFALPSNGAASLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGERPSASGTSTQTVEQGRSVKAPRERPSERQGRRQAGGKVGAPPGSTAASGDDLDRFLYGSTGSDTPASPSSSPSSRPQSRPTPHAVQGGLPRVHSSPPPVGTAASPPPPRAHSASPGPRPGPPLSAGMAGLDIDEDDSPPPPSSFPPSSSGRGGPTPPPKGPSPPPATPEELFFMQPTTTKQAEAAKEEQEADALRQRVGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVFAAKELK
Sbjct: 1 MARPWCFYFVQGEEGESPEEPNVFALPSNGAASLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGERPSASGTSTQTVEQGRSVKAPRERPSERQGRRQAGGKVGAPPGSTAASGDDLDRFLYGSTGSDTPASPSSSPSSRPQSRPTPHAVQGGLPRVHSSPPPVGTAASPPPPRAHSASPGPRPGPPLSAGMAGLDIDEDDSPPPPSSFPPSSSGRGGPTPPPKGPSPPPATPEELFFMQPTTTKQAEAAKEEQEADALRQRVGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVFAAKELK 488
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|553188811|ref|XP_005854869.1| (hypothetical protein NGA_2058800, partial [Nannochloropsis gaditana CCMP526] >gi|422294190|gb|EKU21490.1| hypothetical protein NGA_2058800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 412.149 bits (1058), Expect = 8.021e-141 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
Query: 1 MARPWCFYFVQGEEGESPEEPNVFALPSNGAASLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGERPSASGTSTQTVE 204
MARPWCFYFVQGEEGESPEEPNVFALPSNGAASLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGERPSASGTSTQTVE
Sbjct: 4 MARPWCFYFVQGEEGESPEEPNVFALPSNGAASLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGERPSASGTSTQTVE 207
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|635365706|emb|CCI45942.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 159.458 bits (402), Expect = 9.128e-40 Identity = 138/508 (27.17%), Postives = 214/508 (42.13%), Query Frame = 0
Query: 5 WCFYFVQGEEGESPEEPNVFALPSNGAA--SLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFG-----------------YVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGE-RPSASGTSTQTVEQGRSVKAPRERPSERQGRRQAGGKVGAPPGSTAASGDDLDRFLYGSTGSDTPASPSSSPSSRPQSRPTPHAVQGGLPRVHSSPPPVGTAASPP--PPRAHSASPGPRPGPPLSAGMAGLDIDEDDSPPPPSSFPPSSSGRGGPTPPPKGPSPPPATPEELFFMQPTTTKQAEAAKEEQEADALRQ--------RVGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVF 482
W FY++QGE+GE PN F +P +G++ +L FPL +H RF++ + G + W D+ + +P+ G I K+LRL KP R +RKP+ S++ + + A R S ++ + R T + G A P +S+ + T +Q + K P E + S TS ++ E S GG G P G++++ + D + S ++ P+S +P+ + P P AAS P A G GP A M D + + PS + K A E M TK +A ++ +EA L +GP+L+ WA D G+++NIR+LLSTMH V+W +S W+ V +G L+ P+ VK YRKAM+VVHPDK+ +AE+ +AE+VF +VN A+ F
Sbjct: 12 WAFYYIQGEDGEDRSHPNAFKVPYSGSSDITLADIHRHFPLKNPSE----FHFRFRLNTVVRGTPISDHNGKTASSNKHTFFWLDITSTKQKVPLSNGRIICKLLRLQKPQRIGLIFQRKPV----------SIQTRIQKDQAVKIR--CSHANASELDMRTSDYTEAEGGGAYGHPGTPHKEYQASAKRNENTNQQSSTNKVPVEQKAEKSRTSNESFEDFLS-----------------GGGPGKPTRGAGIDGNNVNLMI------DHAWNQEGSAANMPRSSTSPNFLNSMDPLTQKKTPQTINAASSKTQAPPAFDDDGGQTVGPVTLAEMRKYATSTSDGS---NVYNPSLIDKS-----TKSEFVRRAMEERERKMNEEITKARQALQQREEAQRLISTQKEQAYVMIGPKLKAWAED----NGRIKNIRTLLSTMHLVMWENSKWQEVNMGKLIQPQDVKKVYRKAMIVVHPDKSRGCNAEELLIAERVFAAVNTAWEEF 468
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|695456786|ref|XP_009537037.1| (hypothetical protein PHYSODRAFT_565430 [Phytophthora sojae] >gi|348667646|gb|EGZ07471.1| hypothetical protein PHYSODRAFT_565430 [Phytophthora sojae]) HSP 1 Score: 152.91 bits (385), Expect = 2.786e-37 Identity = 149/516 (28.88%), Postives = 225/516 (43.60%), Query Frame = 0
Query: 5 WCFYFVQGEEGESPEEPNVFALP--SNGA-ASLKHFLGAFPLTQQKGGDRVYHARFKVKDDLFG-YVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTTRLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVSTASSGVAATAVPS--AVRPPTSSSS---GISTQTVEQGR----SVKAPGERPSASGTSTQTVEQGRSVKAPRERPSERQGRRQAGGKVGAPPGSTAASGDDLDRFLYGSTGSDTPASPSSSPSSRPQSRPTPHAVQGGL---PRVHSSPPPVGTA-ASPPPPRAHSASPGPRPGPPLSAGMAGLDIDEDDS--------PPPPSSFPPSSSGRGGPTP-----PPKGPSPPPATPEELFFMQPTTTKQAEAAKEEQEA--------DALRQRVGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVF 482
W FY++QGE+GE PN F L S GA +L L +FPL +H RF++ + + W DV P +P+ G + K+LRL++P +P RR+P+ G + PP+R S+A G +A++V S AV+P S S+ EQGR S +APG S +G + + R+ E+ S R +G + P + AA+ DL+ FL G G +P +++P+ P + G P + P + + P A A+P + P + D+D+ + +S G P K A E +Q + E ++ +EA D +GPRL+ WA D G+++NIR+LLSTMH V+W D W V +G L+ P VK +YRKAM+VVHPDK +AEQ +AE+VF ++N A+ F
Sbjct: 6 WAFYYLQGEDGEDRAHPNAFRLAGVSPGADVTLADVLRSFPLRNPA----AFHFRFRLNNSKGNTFYWLDVTQPTQKVPLAGGRVICKLLRLERPQKPGLVFRRRPVLKWASG---------------------------SQPPKRQGSSSA-LGDSASSVQSAKAVQPVAEGGSFHRSSSSPGFEQGRPAKYSDRAPG---SGNGDARHSNASSRASSTSGEKKS--MSRTSSGSR---PTTAPAAAQGDLEDFLSG--GQQSPGGNATAPAPSPPKKDVNLMSDSGWNDAPAATAQPTNASSDFLNSMDPLAARAAPAQQVSPSKAVQREAPKFDDDNGQTVGPVTMAEMEAHSKSTSDGSNVYNPNLVDKSTKSEDVRRAMEERERQVQRDVERAREELRKREEAARNMSAMKDNANAVLGPRLKAWAED----NGRVKNIRTLLSTMHQVMWEDCKWSEVNMGKLIQPNDVKKHYRKAMIVVHPDKAGGRNAEQILIAERVFAALNTAWEDF 475
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|950893371|ref|XP_014528159.1| (hypothetical protein JH06_3192 [Blastocystis sp. subtype 4] >gi|902862770|gb|KNB44716.1| hypothetical protein JH06_3192 [Blastocystis sp. subtype 4]) HSP 1 Score: 121.324 bits (303), Expect = 2.304e-27 Identity = 73/240 (30.42%), Postives = 121/240 (50.42%), Query Frame = 0
Query: 250 STGSDTPASPSSSPSSRPQSRPTPHAVQGGLPR---VHSSPPPVGTAASPPPPRAHSASPGPRPGPPLSAGMAGLDIDEDDSPPPPSSFPPSSSGRGGPTPPPKGPSPPPATPEELFFMQPTTTKQAEAAKEEQEADALRQRVGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVFAAKE 486
S SD P SP++ S T +V+ R V+ P P+ A PP A P + +DE+ S +S+ G+ ++ + ++ + +E+E DA + + G +L WA D GG+ +NIR+LLSTMHTV+W+++ +KP+ + L+ P++VK YYRKAML VHPDK G+A+Q ++A+++F ++N A++ F +E
Sbjct: 55 SDTSDIPLHSEQSPTTPNDSVFTFVSVESDDLRPQYVNDKPEPLAKPAFSAPPIIEEA-----PVNLKYVTKKDIQLDEEASKLTATSY----EGKSETVVAAMKAREEQLRERQIKALMEKKEREIASEVKEEERDAAKAKYGKQLNAWAYD---MGGERKNIRTLLSTMHTVMWSEAEFKPISMAQLLDPDKVKLYYRKAMLRVHPDKVAGGTADQVYIAQRIFEALNNAWSTFQEQE 282
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|299471328|emb|CBN79284.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 122.479 bits (306), Expect = 3.564e-26 Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = 0
Query: 374 EAAKEEQEA-DALRQRVGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVFAAKEL 487
EAA ++Q+A DA + + +L WA D GK RN+R+LLSTMH VLW + WK V +GD++ P +VK YRKAML+VHPDK + E+R +A++VF +VNEAYT+F KE+
Sbjct: 457 EAASKDQDAMDAAKVKHDAKLTSWAEDH----GKKRNVRTLLSTMHLVLWEGNRWKSVSMGDIIQPSKVKLSYRKAMLLVHPDKCGSLGPEERLIAKRVFEAVNEAYTLFQEKEM 567 HSP 2 Score: 98.2117 bits (243), Expect = 3.121e-18 Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0
Query: 5 WCFYFVQGEEGESPEEPNVFALPSNGAAS---LKHFLGAFPLTQQKGGDRVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRP-TTRLRRK 105
W FYF+QGE+G+S E PN F + GA S L FL AFPL G YH RF+ D + GY W DV DP LP Y I K LRLD+ P+P ++RLRRK
Sbjct: 8 WVFYFLQGEDGDSVENPNAFNIM--GAVSEVRLGQFLQAFPLRGHGG---QYHFRFRAPDQVSGYCWMDVSDPSAVLPRYGNVICAKALRLDRLPKPRSSRLRRK 107
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|566030512|gb|ETI53423.1| (hypothetical protein F443_03619 [Phytophthora parasitica P1569] >gi|570994003|gb|ETP51217.1| hypothetical protein F442_03599 [Phytophthora parasitica P10297]) HSP 1 Score: 109.383 bits (272), Expect = 4.732e-22 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = 0
Query: 389 VGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVF 482
+GPRL+ WA D G+++NIR+LLSTMH V+W D W V +G L+ P +K +YRKAM+VVHPDK+ +AEQ +AE+VF ++N A+ F
Sbjct: 381 LGPRLKAWAED----NGRVKNIRTLLSTMHQVMWEDCKWTEVNMGKLIQPNDIKKHYRKAMIVVHPDKSGGRNAEQLLIAERVFAALNTAWEDF 470
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|675183879|ref|XP_008900824.1| (hypothetical protein PPTG_08475 [Phytophthora parasitica INRA-310] >gi|568099031|gb|ETN13749.1| hypothetical protein PPTG_08475 [Phytophthora parasitica INRA-310]) HSP 1 Score: 108.997 bits (271), Expect = 5.925e-22 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = 0
Query: 389 VGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVF 482
+GPRL+ WA D G+++NIR+LLSTMH V+W D W V +G L+ P +K +YRKAM+VVHPDK+ +AEQ +AE+VF ++N A+ F
Sbjct: 381 LGPRLKAWAED----NGRVKNIRTLLSTMHQVMWEDCKWTEVNMGKLIQPNDIKKHYRKAMIVVHPDKSGGRNAEQLLIAERVFAALNTAWEDF 470
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|568025814|gb|ETL99816.1| (hypothetical protein L917_03384 [Phytophthora parasitica]) HSP 1 Score: 108.997 bits (271), Expect = 6.037e-22 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = 0
Query: 389 VGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVF 482
+GPRL+ WA D G+++NIR+LLSTMH V+W D W V +G L+ P +K +YRKAM+VVHPDK+ +AEQ +AE+VF ++N A+ F
Sbjct: 381 LGPRLKAWAED----NGRVKNIRTLLSTMHQVMWEDCKWTEVNMGKLIQPNDIKKHYRKAMIVVHPDKSGGRNAEQLLIAERVFAALNTAWEDF 470
BLAST of EWM25733.1 vs. NCBI_GenBank
Match: gi|567968114|gb|ETK93264.1| (hypothetical protein L915_03513 [Phytophthora parasitica] >gi|970655253|gb|KUF93442.1| Cyclin-G-associated kinase [Phytophthora nicotianae]) HSP 1 Score: 108.997 bits (271), Expect = 6.152e-22 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = 0
Query: 389 VGPRLEQWARDPPAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAMLVVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVF 482
+GPRL+ WA D G+++NIR+LLSTMH V+W D W V +G L+ P +K +YRKAM+VVHPDK+ +AEQ +AE+VF ++N A+ F
Sbjct: 381 LGPRLKAWAED----NGRVKNIRTLLSTMHQVMWEDCKWTEVNMGKLIQPNDIKKHYRKAMIVVHPDKSGGRNAEQLLIAERVFAALNTAWEDF 470 The following BLAST results are available for this feature:
BLAST of EWM25733.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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