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Properties
Property Name | Value |
Product | dnaj heat shock n-terminal domain-containing protein |
Orig transcript id | gnl|cribi|Naga_100087g12.1113.mrna |
Orig protein id | gnl|cribi|Naga_100087g12.1113 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002464.1 | supercontig | CM002464.1:746075..748101 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4950 ID=rna4950|Name=rna4950|organism=Nannochloropsis gaditana|type=mRNA|length=5204bp AAAGACTGGTCATTGGGCTCTGACACGTGCTACAATGCGACACCGGCACG CATGGGGGGGCTGTACTTTTAAATTTTTTATACCACTATGTCTCGAAAAG ACACTTTTTTGGCTTCTTTTTTCGCATCCGAAAGCGAATATTTTACTTTC TTCGACCTCCAGGCCCGCGCATCGTCGCCCTCGTAGCTGAAGCCGAAACA TATGTCACCCGAGACGAGGGCACCGGGCGTCACTTGTACCCTACTACCAT CCACTTGACCCGATCAACGTGGGATCCAAGCAGTCATCGACGGAGTTTTA AACACGTACCGCAGGCATCTTGAGGTCGGGGGACAAATGCCGACGCGACA TCGCCCTGCAATCCACGCAGCTGCAAGAACAAGAACAAGAGGGCCAAGTT CAACGAGGATCGTTGAAGAAGCATCAGTGAAATGGACATCCCGCACGAAA AACGAAGGCACGGACACTCGCCTCGGTTGCTTTTCTGTTCTACAAGTGTG GACTTTGCCAATACCTTGAGATGGAAGGAGGAAATTGGGGCCTTATACTT TTATGAGGTCAGATAGCTTATTTTTCTGTTCATGTTCGCTTTTCTAGCCG ACAACAGAGTTCTTGGTGAACGTGTGTTTGAACTGACATTTTTATGTAGC ATATGAAAAGATTGTGTTATTAAGAGAAATATTGTAGCGTACATATTTGT AGAGTCATCTTAAGAAATCTTCGTATATCTTACCACGATCACGGGCGTCA GTCACAGTACTCTGATCATTCTCCGCAGAAATCAATTTATGTAGTGCATG TGTTTGGCTTACATCTCTCTCTCGCGAATTATGGTCGTCGAAATATATAT TTCAATTTCTTTTCACATAGTGAGTAGAATACTAGTGCATGTCTTTCTCG CTTTAATAGCAGGGATAAGTGTAACCTCCTCAAAACGGAAAGTGGGCGGT CGAGACCTGGCTAGTTTGAGGGTGCGAATTGATGGATATTATTATTGCGC AACCGAAAAGGAGAAAATAAGTAAACTGTAATGAGTTTGCAATGTTCATC TACATTGCTAATTGAGAGATCCGAAAACTGAACAAAACTGCCTTTTACTC CTTTGTCGTCTCAGCACAACTAAATATTTACAAGGTACATTTCTTTCGGA AGCCAGGCAAATAAATGCGTTGTTGATAGCTTCCTTGCAGATCGTTCTGA ACTGCTTGTAGATGCGCTACATAAACATTACATATTCTTAAAACGATTGT GGTACGAGAGATCGCTCTTCTGCATCTAGGCGTCGTTCACTTCTTGAAAA TTCTATTCGACCATTTTCCTTCTTCCGTTCGACGTACCAAGTGTACTATG AAATGATGTTCCCTCTCTGAGACACTAAGCACTCTGTTGTGGTAAAAGAC GTATAACATTTACAGTTCGTGACTTTCTTTCTTAAGCGCCATCTGTTCAA TCTCCTCGTCCACGCTTTCGCCCCAATCATCTCGAGCACACTCACTTCAC CGCACCTCTCCCACACATCTTCCGACCACTTCCATCAATATTGTACACTT GCCTGATACAGCTCATCGAGGTGATTGAGATTCTTATTTACCGTGTAAAA GTAATGATTTTTTCGTCAACTTGAAATGCACATTCAACTTGTGTTGAGGT CCTGACTCAATTTCACGCAAGCAATATCAATACGAAGACAACTGACTTGC AAGGAAATGGACAGAATAGCTAGAACACCATTTTTGTGCTATTATGGACA CAAAGTACTGGGATGGTAAGGAAAAGATCTATAGCGGTGAGCTGCTAGCG CGAAATCAAGTCTTCAAGACACGTCGTAGTTGGGGAAAAAGGAAGGAGCG TGATGTTCGAAAGGCTCTTACGTACTGGAATTGTCAGATTGAAAACAAAA TTTAAAAAATATATCTCAGACAGAAGGACCTAAACAAGAGAGCATTCTAA AAATTACATCGTCGGCGAGATCGCGTGGCAGAAGCTCCAGTCACGTCTTT TTCCAGCGTGAGGTGGGATGGAACGCCATGTTATAATGAACCATTTATCT AAATGCTCGAATCTGCATTACAGAGTGACCTGATGTTCTTTATGGGCGGA CCCAAAACTAAATGAACGGCCTGCACTATGAAGCCCGCAAGCCAGGTCAA CCTCCTGCCTCTCCCTTTCCCTTCAGCCGCACGAAGTTCAACGCAATTAT CAAACGTCATCCTCAGGACTTTGAGGTGCGTGAAATCGACCTAGAAGGCA TTGTGGCAGACATTACAACTCCAGCAAAGTTTCCAGCGTCATGGGAATTT GCCATTAGGAAAGGTGCGACGGCTGAAGCCGCACTGGGGCACGACGTTAC ACTGAATACCTCAAGCACCGCTTTGGCCGTGCGATCATCGCACTTGCTCC CCCCATGTTATGGGAGAGAAGAATTGATAAGTAGATATGGTATGGAGCTT TTAAAAGCGCTTGAGTCACTCCATCGACGGAGCGTCCTTGAGGTGCTGGT CCCCACCACGCCATACTCGCAAGCTGGAAAAGGCACGGAGAGTGAAGTCG GTGAGGGAAAACATACGGGATGTGGTGAGAAAGCACAAGAAATCGAGCGC CTGGAAGATGAAATCAACATCCCTCTCCCGTCCGACCGGGCTGCCCGGGG GATGTTGCACCGGTCTCTCCGAGCCTGTTTTCCTGGGCTGTCCACTTGCC AACACCCGCATGCTCCCTCCCTCCTGCGTGCCTCCAAAGACACTCCGAAA ATCACCCTTGCCAATGCTCTGCTTCAGCTCCAGGGAGTAACTCTCTCCCA CGTCCTGGATCTTCTGGCGTACATGGGCCGAGGTCCCTCGGACCCCGGGC CAGAGACTCAGGCGGGTGTCAGGCTGGGAGGGGGCCTCGACCGAGATGCT CGCAAGCAGGCGCACGAATTGATCACGAAACACTCCCCAGCCCTGCAGTG CATCTCCCGCAACAATATTCATGTCATCGTGGTCTGGAAACCCGCGTCAG GGCGCCAGGAAAAGAAAAAAAGGCGTCGGAGTGAATTCTCCTGTGCTTCT TCCACGTCCGGTCACAGCCCCGGCAACGCCGATATGGCGGGTACGCACGG ATTTCTCGCCCGTTTTGTCCTGTGCAAGAGGAACGTGGAGCATTTGGAGG CTTTGCAGCGAGTGGGCCGAGCGTGGGGGCTTTCCCTCTCCACTTCCCTG GCCACCGCGGGGGTCAAGGACAAGCGTGCCATCACCTACCAGTACGTTAC TGCCAGCATACCTGGAACTCCAGACGCGCTCGACGCATTTCGACGGGGTG TATCAAAGGCCTCGCTCCTCTTCCCCGGGAATGTCGGGGCGCCTGCCTCC CCCCCTCCACCTTCCGTATCCCTCCCCGCCCGATCCCCCCCCCTCCAGGA AGCTGTAGACCCTCACGCCGGGCCCGGCGCTGGTGGGAAGGGCGTGGGCG TGGGGAATCTCCAGGACTGGGGAAAGGACCCCTCCCGACGTCCCTTACAA GCAGGGCAAAGTCTAGGCAATGCTTTCCGGGTGGTGGTGCGCCACGTCCA CCCCAGGCTCGCGGGGGTGGCCGGTGGGAAGGAAGCAGAGGACCGAAGCC CTGTGGAGGAGTCAAATGGTGGCAGCGAGGGGGGTGAGGACGGAAAGCCC CACATGCCCGAGACAATGATGGAATTGGATAGGCGGCTGCAGCGCCTGGC GAGCGAGGGTTTCATCAATTTCTTTGGCGCCCAGCGGGTGGGTATGGGGG CAGCGAGGGGCCAAGAACAGGAGGGGGGGGGGGAGGGAGGAGGAGAGGGG GGAGAAAGGGGAAGAGCGACTTTGGGGATGCCCTGGGAGTTGGGCCGGGC GCTCCTCAAGCAAGACTTCCCAACCTTCCTCCGGCTTTTTTTGGGCGTGC GCGAGGAGGAAGATGAGGGAGATGAGGACGGGGATGGGGGGGGCAGGGGA AGGGAGGAGAAAAGAGAAGGCCTCGAAGGTATAGGATTGTCAAGGTCTGG CATTCCAGGTGCGGGAGGCACGGAGGGAGGTAGGTCCGAGGGCGGACTGG TAGAGGAGGCGGAAGAAAGGACAGACAGGGAGGAAGAGCAGGGGCTGGCA GGTGGCAACGCGAGGAGGGGGAAGCGACAGGAAGGGAGCATAGCGGATCA AAGGATAACTACTAGTCAAGGCGAGCACAGGAGGAGGGGCGGCATCCAGC GCGCGAAAGCCCTCTTCTGGGACCGAAGCACGCCCCTCTCTGCTGTCCTT CGCTTGCTGCCTCCCACCATGACGCGTGAACGGCTCTTCGTCCGAGGCCT GCAGCGGTACGGGCGGGGAGAGATTGAACGTGCGCTTTGCGAGATCCCCT ACCAAGCGCGGACCCAGTGGGTGAACGCTTACCAGGCCTGGTTGTGGAAC AGGCTCGTGGCCCGGCGCGTCCAGCGGTACGGCCTCAGGGCGATGGCCGG GGATGTGGTGCTGGAGGGTCGGGAAAGAGGCGGGGGCGGGGACCAGTGGG AGGGGGACCGAGCCAAGGAGGGTGGCCAGGGAATGGTGAGCAAGCGGCAA TCAGTGCGGTTCGTTACAGCCGAAGAGCTCACTGGGGACGGGGCTGCCAC AGCGCTGGCGCCGTTCGTCGTATTCCCCGTGATCGGATACGGCGTGCAGT TACCTCGTGACGAGGCAATGCATGCAGAATGCTGTCGCCTGTTGAAGGAG GAGGGGATGTGGGAAATGTTGCGGAACAAAAGTGCAATGACGTGGGAAAG CCAACGACTTGTTGGAAAGTTAAAAGGTGCATATCGACCATTATTTGTGA AGCCGGAAGGGTTGGAATGGACCTTCCTGACCCCTAAGCAGGACAATGTG CATGTCCCTCATGTCCATGCGGTGGCGGATAATCAAAGGAGCAGCATGCA AGGGTCAATTGACATGGAACTAAGATTTCGGTTGCCGCCAGGGAGTTTTG CCACGGTGTTGATACGAGAGGTGCTGGGAAAGGAACCCGTCTCCTGGTAG CCATTCACGATACGCGACAGGTACCTCGGACACGAGTGCCTGCACTCGTC TGTATAGTCATGTATAGGTTCCTCGCCACGGAAGGCAGCTGCAAACTCCT GGCAAGCCACCGTGAAGCACAAACATTAAAAGACAATTTTGAGACTGAGA GATTGTTTGAAATGAACTAAGCCCTTTGAAAAAAGTCTCTACTTCTTGCG CATA back to topprotein sequence of rna4950 >rna4950-protein ID=rna4950-protein|Name=rna4950|organism=Nannochloropsis gaditana|type=polypeptide|length=488bp MARPWCFYFVQGEEGESPEEPNVFALPSNGAASLKHFLGAFPLTQQKGGD RVYHARFKVKDDLFGYVWQDVVDPQDTLPVYQGAIHVKVLRLDKPPRPTT RLRRKPLGTLGGGRPAASMRQDVGRGTASTARNTTSSSHVATPPRRPDVS TASSGVAATAVPSAVRPPTSSSSGISTQTVEQGRSVKAPGERPSASGTST QTVEQGRSVKAPRERPSERQGRRQAGGKVGAPPGSTAASGDDLDRFLYGS TGSDTPASPSSSPSSRPQSRPTPHAVQGGLPRVHSSPPPVGTAASPPPPR AHSASPGPRPGPPLSAGMAGLDIDEDDSPPPPSSFPPSSSGRGGPTPPPK GPSPPPATPEELFFMQPTTTKQAEAAKEEQEADALRQRVGPRLEQWARDP PAAGGKLRNIRSLLSTMHTVLWADSAWKPVFLGDLMAPERVKFYYRKAML VVHPDKNVTGSAEQRFVAEKVFTSVNEAYTVFAAKELK back to topmRNA from alignment at CM002464.1:746075..748101+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4950 ID=rna4950|Name=rna4950|organism=Nannochloropsis gaditana|type=mRNA|length=2027bp|location=Sequence derived from alignment at CM002464.1:746075..748101+ (Nannochloropsis gaditana) CAAAATTAAATCCCACTCACTATTCCTTGTGTTCCCAATCTAGGACACGC
GATGGCGCGGCCGTGGTGTTTCTACTTTgtacagggggaggaaggagaaa
gtcCTGAGGAGCCAAATGtcttcgcccttccctcAAACGGGGCCGCAAGC
TTGAAACACTTCCTAGGTGCCTTCCCGCTAACCCAGCAAAAAGGCGGGGA
CAGGGTATACCATGCACGCTTCAAAGTCAAAGACGACCTATTCGGCTATG
TCTGGCAAGACGTCGTTGATCCCCAGGACACCCTTCCTGTTTATCAAGGC
GCCATCCATGTCAAAGTCCTCCGCCTGGACAAGCCCCCAAGGCCCACCAC
GCGGCTCCGTCGCAAGCCTTTAGGGACtttgggagggggaagacctGCTG
CAAGTATGCGCCAGGATGTGGGACGCGGAACAGCGTCGACGGCTCGAAAc
acaacttcctcctcccacgtgGCAACGCCGCCTCGAAGACCTGATGTTTC
CACTGCTTCGTCTGGCGTGGCAGCCACTGCCGTGCCCAGTGCAGTCCGTC
cccctacttcctcctcctctggaATAAGCACGCAGACCGTAGAACAGGGT
CGGTCGGTGAAGGCCCCTGGAGAGAGACCTTCCGCCTCTGGAACAAGCAC
GCAGACCGTAGAACAGGGTCGGTCGGTGAAGGCCCCTAGAGAGAGACCTT
CCGAGAGACAAGGCAGACGCCAGGCAGGCGGGAAGGTAGGGGCACCCCCG
GGAAGCACCGCGGCCAGCGGCGATGACCTGGATCGTTTCTTGTACGGCAG
CACCGGCAGCGAcacccctgcttccccctcaAGCTCGCCAAGCAGCCGGC
CACAGTCTCGACCCACCCCGCACGCCGTCCAGGGGGGCCTCCCTCGGGTC
CActcctcgcctccgcccGTCGGGactgccgcctccccccccccgccccg
cgcTCACTCCGCCAGCCCGGGTCCCCGCCCAGGCCCCCCTCTGTCCGCGG
GCATGGCCGGCCTGGACATTGACGAAGACgactctccccctcccccgtcc
tccttccccccctccagcagcGGCCGGGGCGgccccactcccccccccaa
gggcccttcccccccacctgcCACACCGGAGGAGCTTTTTTTCATGCAac
cgacgacgacgaagcaggcggaggcggccaaggaggagcaagaggcaGAC
GCCTTGCGCCAGCGGGTGGGGCCGCGTCTGGAACAGTGGGCACGCGACCC
GCCCGCGGCAGGAGGCAAGCTCCGCAACATTCGCAGCCTGCTCTCCACCA
TGCACACGGTCCTGTGGGCGGACTCTGCCTGGAAGCCGGTCTTCCTCGGG
GACTTGATGGCGCCCGAACGGGTTAAGTTCTACTACAGGAAGGCCATGCT
TGTGGTCCATCCGGACAAGAACGTGACGGGCTCGGCAGAGCAACGCTTTG
TGGcagagaaggtggggggaaggagggagagagggaaggagggaaggctg
ggGTCTGAAGGCTCGGCGTGGCGTGGATGTTCAGCCCTGTCGTGCCCGCG
GGGTCCCGTCTCTTCTGCTGACGGATTCCgggttcctcccctcctctccc
gcacaGGTGTTCACGAGCGTCAACGAGGCGTACACGGTCTTCGCGGCGAA
AGAGCTCAAGTAAGGGGGATAGGGAACGCCCTGGCGGCTGGCGAGACGGG
TATGGGCCGAAGGAGTGACCctgggtgggggagggggatggcgcCGGCTT
TGGCGGGCGCTCGCTCGCTTGCGGTCCGGCCGCGGACGGATTCATTTGCG
GCTTGCATGAGGCCAGCCGTCCCTTGAGAGCGCAGAGAAtagagaggcag
gggggtggggaggcaaAGTCGGTAGAGCGATGGCTCGTTTTTCGGTAGAA
agcaagcgaggaggacgagcaagaaAATAAGGGCGTGGCCGTGTCTGTGT
GGTGGACCGCGATGTGAAGTAGTGCTTGTATTTAAAATTTGAAGAATTGA
GGAACATTTTCAGGTAGCACACGAATC back to topCoding sequence (CDS) from alignment at CM002464.1:746075..748101+ >rna4950 ID=rna4950|Name=rna4950|organism=Nannochloropsis gaditana|type=CDS|length=2934bp|location=Sequence derived from alignment at CM002464.1:746075..748101+ (Nannochloropsis gaditana) ATGGCGCGGCCGTGGTGTTTCTACTTTgtacagggggaggaaggagaaag tcCTGAGGAGCCAAATGtcttcgcccttccctcAAACGGGGCCGCAAGCT TGAAACACTTCCTAGGTGCCTTCCCGCTAACCCAGCAAAAAGGCGGGGAC AGGGTATACCATGCACGCTTCAAAGTCAAAGACGACCTATTCGGCTATGT CTGGCAAGACGTCGTTGATCCCCAGGACACCCTTCCTGTTTATCAAGGCG CCATCCATGTCAAAGTCCTCCGCCTGGACAAGCCCCCAAGGCCCACCACG CGGCTCCGTCGCAAGCCTTTAGGGACtttgggagggggaagacctGCTGC AAGTATGCGCCAGGATGTGGGACGCGGAACAGCGTCGACGGCTCGAAAca caacttcctcctcccacgtgGCAACGCCGCCTCGAAGACCTGATGTTTCC ACTGCTTCGTCTGGCGTGGCAGCCACTGCCGTGCCCAGTGCAGTCCGTCc ccctacttcctcctcctctggaATAAGCACGCAGACCGTAGAACAGGGTC GGTCGGTGAAGGCCCCTGGAGAGAGACCTTCCGCCTCTGGAACAAGCACG CAGACCGTAGAACAGGGTCGGTCGGTGAAGGCCCCTAGAGAGAGACCTTC CGAGAGACAAGGCAGACGCCAGGCAGGCGGGAAGGTAGGGGCACCCCCGG GAAGCACCGCGGCCAGCGGCGATGACCTGGATCGTTTCTTGTACGGCAGC ACCGGCAGCGAcacccctgcttccccctcaAGCTCGCCAAGCAGCCGGCC ACAGTCTCGACCCACCCCGCACGCCGTCCAGGGGGGCCTCCCTCGGGTCC ActcctcgcctccgcccGTCGGGactgccgcctccccccccccgccccgc gcTCACTCCGCCAGCCCGGGTCCCCGCCCAGGCCCCCCTCTGTCCGCGGG CATGGCCGGCCTGGACATTGACGAAGACgactctccccctcccccgtcct ccttccccccctccagcagcGGCCGGGGCGgccccactcccccccccaag ggcccttcccccccacctgcCACACCGGAGGAGCTTTTTTTCATGCAacc gacgacgacgaagcaggcggaggcggccaaggaggagcaagaggcaGACG CCTTGCGCCAGCGGGTGGGGCCGCGTCTGGAACAGTGGGCACGCGACCCG CCCGCGGCAGGAGGCAAGCTCCGCAACATTCGCAGCCTGCTCTCCACCAT GCACACGGTCCTGTGGGCGGACTCTGCCTGGAAGCCGGTCTTCCTCGGGG ACTTGATGGCGCCCGAACGGGTTAAGTTCTACTACAGGAAGGCCATGCTT GTGGTCCATCCGGACAAGAACGTGACGGGCTCGGCAGAGCAACGCTTTGT GGcagagaagGTGTTCACGAGCGTCAACGAGGCGTACACGGTCTTCGCGG CGAAAGAGCTCAAGTAAATGGCGCGGCCGTGGTGTTTCTACTTTgtacag ggggaggaaggagaaagtcCTGAGGAGCCAAATGtcttcgcccttccctc AAACGGGGCCGCAAGCTTGAAACACTTCCTAGGTGCCTTCCCGCTAACCC AGCAAAAAGGCGGGGACAGGGTATACCATGCACGCTTCAAAGTCAAAGAC GACCTATTCGGCTATGTCTGGCAAGACGTCGTTGATCCCCAGGACACCCT TCCTGTTTATCAAGGCGCCATCCATGTCAAAGTCCTCCGCCTGGACAAGC CCCCAAGGCCCACCACGCGGCTCCGTCGCAAGCCTTTAGGGACtttggga gggggaagacctGCTGCAAGTATGCGCCAGGATGTGGGACGCGGAACAGC GTCGACGGCTCGAAAcacaacttcctcctcccacgtgGCAACGCCGCCTC GAAGACCTGATGTTTCCACTGCTTCGTCTGGCGTGGCAGCCACTGCCGTG CCCAGTGCAGTCCGTCcccctacttcctcctcctctggaATAAGCACGCA GACCGTAGAACAGGGTCGGTCGGTGAAGGCCCCTGGAGAGAGACCTTCCG CCTCTGGAACAAGCACGCAGACCGTAGAACAGGGTCGGTCGGTGAAGGCC CCTAGAGAGAGACCTTCCGAGAGACAAGGCAGACGCCAGGCAGGCGGGAA GGTAGGGGCACCCCCGGGAAGCACCGCGGCCAGCGGCGATGACCTGGATC GTTTCTTGTACGGCAGCACCGGCAGCGAcacccctgcttccccctcaAGC TCGCCAAGCAGCCGGCCACAGTCTCGACCCACCCCGCACGCCGTCCAGGG GGGCCTCCCTCGGGTCCActcctcgcctccgcccGTCGGGactgccgcct ccccccccccgccccgcgcTCACTCCGCCAGCCCGGGTCCCCGCCCAGGC CCCCCTCTGTCCGCGGGCATGGCCGGCCTGGACATTGACGAAGACgactc tccccctcccccgtcctccttccccccctccagcagcGGCCGGGGCGgcc ccactcccccccccaagggcccttcccccccacctgcCACACCGGAGGAG CTTTTTTTCATGCAaccgacgacgacgaagcaggcggaggcggccaagga ggagcaagaggcaGACGCCTTGCGCCAGCGGGTGGGGCCGCGTCTGGAAC AGTGGGCACGCGACCCGCCCGCGGCAGGAGGCAAGCTCCGCAACATTCGC AGCCTGCTCTCCACCATGCACACGGTCCTGTGGGCGGACTCTGCCTGGAA GCCGGTCTTCCTCGGGGACTTGATGGCGCCCGAACGGGTTAAGTTCTACT ACAGGAAGGCCATGCTTGTGGTCCATCCGGACAAGAACGTGACGGGCTCG GCAGAGCAACGCTTTGTGGcagagaagGTGTTCACGAGCGTCAACGAGGC GTACACGGTCTTCGCGGCGAAAGAGCTCAAGTAA back to top
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