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Properties
| Property Name | Value |
|---|
| Product | fatty-acyl elongase |
| Orig transcript id | gnl|cribi|Naga_100162g5.1254.mrna |
| Orig protein id | gnl|cribi|Naga_100162g5.1254 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:698739..701263 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4931 ID=rna4931|Name=rna4931|organism=Nannochloropsis gaditana|type=mRNA|length=1818bp
TTTCCACGTTTTTATTGCTCGTTGCTTCAATTAACAAATGATTTGCGTTG
ATAGGTATATTTTCACCTTTGTAATTTGGTCTAAATATGTGGTCGTTTGT
TATTCACGCAAGCAGGTCGAGCTTTTTGTAAAAGCTTACGATTCTGACCG
AATGGAAGCCCGTTTCTTTGAAAGGCGTTGTCTGTACTCCACCATATGCT
GAGCGTCTCCGCAGAAGTACATTTTTAAGAGTGCATTTTAAAGGCAATCT
GAAATAGGACAAAAAACACAAATAAGATGAGTGCCGCACGATGTTTGCTT
ACGCGGTGATATTGATACTGCTGACTGTGAAGCATTATTTATATCATCTT
CCCTAGTGGCCTCGAGTATTTTCTTGAAAAGACTTTCTGCGTCTTAAGGA
AGCTCTTTGTCTTAATTCGTCTTTTCTTTCACATATGAGACCAGCTTCAA
AAATGACGACAGCCGTTTGCACAAGCCAATGGTATTGCCCCCCGGAGACT
TTGACGGCCACCACCCGTGTCTATACCGCACGAAATACAACTTATTCCTT
CATCCAGTTCTGGCAACTTTATCCATGGCTGGAGAACTTTTACGCCCCGT
TCGAGAAAAACTTCAACCCCTTGCCGATATTTGAGTTTGTGAGCGGGAAC
TGGTGGGTCGTTTACATTTCTCTGGCCATCTACATGTCCATGATCATCTT
CCTGCCCATGATCATGAAGAAGCGCCCCCTGAAAAACCTGAGCACGCCAC
TTGCGTGCTGGAACCTCTTTCTGGCTGTGTACAGCACCATTGGCGCCGTT
CGCGTGGTCCCCCACTTGCTGTGGTTCATGTCCACGCACACCTTCAAGCA
GACTGTCTGCACAGCCCCCTACTACATCAATGGGGACGGTGCCACGGGGC
TGTGGGTGACGCTTTTCACGCTCTCCAAGGTGGCGGAGCTCATCGACTCT
CTCTGGATATGTTTGAAGGGACGTAGGCCCATCTTTTTGCACTGGTACCA
TCACGTCTCGGTGCTCTACTTTACATGGGCCGCGCACGAGGCTGCTCACC
CGGGCATGTACTTCATCGCCATGAACTACACGGTGCACTCAGTCATGTAT
ACCTACTACTTTCTGATGGCCATCAAGGCGAAGCCCAAATGGCTCAACCC
TATCTACATCACATTCATGCAAATTGCACAAATGCTGGTGGGCGTCATCA
TTTCCTGCTTTGGGTTCTACTATTCCTCTATGGACGCTTCTTGCGCTGTC
GACCCCTTCGTCCTGAAAGTGTCTGCGGTCATCTATGCGTCTTACCTATA
CTTGTTCATGCAGTTCATGATCAAGCGTTTCTTCGTCAAGAATGCCAGGG
CAGGACAGGAAGGGAAGGTGGCAGCGTCAGCTAAGAAGAATATTTAGGGA
ATAGGGAGGGCCAACTATGTATTCTGCTCAAGCTCGTCCACCTAACCTCT
ACTATATATGGTGGCCCAGTGTATTTTACTCGCACTTAGAGAAAAACAAA
TAAAGACAACACCCTGCGTGTGACATGTATAACCAAAGTGGGGCTTCATA
AAGGTCCTATTGATGGAACGCGTGCGACCGCCGTACTCACGCCTGCAAGG
GGCATCGTCCGCTTTCAAGAAATTTCAAGAACTATGAACAGTGCTTGTCC
ATAATATAAAATAGTCTAGGATGTCGGGTGGTTGTTATGTGAAGAAGGTA
TGAGGCGGCCATCACACGCATGTAGGGTGCTGTCCTAAAAATGACAGGCT
CCGGAGGCGGTCGTAAATGAACGACGAATAAAGAATGCAAGGACAAATTG
AAACAGCCAAAGATTTTT back to topprotein sequence of rna4931 >rna4931-protein ID=rna4931-protein|Name=rna4931|organism=Nannochloropsis gaditana|type=polypeptide|length=337bp
MSEALANLSHPCTSSLYCPPSSLVPVTRELAGHTYTFLQFWQLFPWSEPF
YTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPVKCD
TALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGA
SGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSA
RHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAG
VIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPP
QSVPPASRPVGKEDQGREEGWKTAMTNGAGTHFKKAQ back to topmRNA from alignment at CM002464.1:698739..701263+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4931 ID=rna4931|Name=rna4931|organism=Nannochloropsis gaditana|type=mRNA|length=2525bp|location=Sequence derived from alignment at CM002464.1:698739..701263+ (Nannochloropsis gaditana)
CCTCATTATGAAGCTAACATGACAGTGTTGCGTCACCTGAGTGAGATGTA
AACAATTCAGCCAATGTGGGGAGGTCGAGTAGATGATTGTTTAGTGGTAC
TTCAATCTTTACCTATAATACGATTTGAATTAATTTGCCATCCAAGATCA
AGGTCGACTTGTCCATTCAGATACATTTGATGGTGATGTGACTTTGAATT
CAGCTTGTATTGAACGCGAgtcgtcccccccccattgCGAGGTCTCTTTA
GACCCTGGTCATGAAGTAAAGTACACACCCCACCACAGGCACAACTAGGG
TTGACAAGCAAGAGATCCTATCCAACCATTGCGGACGATcgcttcctcga
cctccaccttctcaaTCTCTCGGGCCTCAATGAGCGAAGCACTTGCCAAT
CTGAGTCACCCAtgtacctcctccttgtactgtcctccctccagcctggT
CCCCGTCACGCGGGAGCTTGCGGGGCATACATACACGTTCCTTCAGGTGC
GAATGGAAGGGAAACAAGTCGCTTTGCCCGTTGCATTGAATGTGACACCT
CGTTGCTTCACTTATATGAAATGTCTCAATCTCCATCCGGTTGCGTTCCT
CAGTTCTGGCAGCTCTTTCCATGGAGCGAGCCCTTTTACACAAGGCTCGA
AAAAGAATTCGATGTCCGCCCGTGGTACTTATTCGTGCACGCGAACGGCT
GGCTGCCTGTTGTGAGTATTATACTGTATGCTGCCATGGTCCTGCTCTTA
CCCCCGATCACGTCCAAAAGGCCTGTCAAGGTGAGACTcgaaggcggggg
aaaggacaacTGCCGTGTGGCAGCCTGACGTAAAGAGCCTACCACATGTA
TGGAGCTGTCTTTTCTCCCTATGTACAGCTCACGTCCGTcccccctccga
ccccaGTGCGACACAGCCCTCGCCTACTGGAACCTCTTGCTGGCGGCGTT
CTCCATCCTGGGCGCCCTCCGCATCGTCCCCCACCTGCTTTGGTTCCTGA
CTACGCACTCCTTCAAGGAGACAGTCTGCACGCCCCCGGAACGGATGAAC
GGAGACGGGGCTTCGGGCCTCTGGTGCCTTTTGTTCACCCTCTCCAAGCT
GGTGGAGCTCGTTGACACCATGTTCGTCTGCCTGAAAGGCCGCAAGCCCA
TTTTCCTGCACTGGTGCGAGGAgaccggaggggaagatggctGCACTTTC
TCTGCAAAAAGGCCGCTGTTTCTCCCAGGCTCCCATGCCaatgcccgccc
tcccccctccctcgtctcccatccccttccctcctaggTACCACCACGTC
ACCGTCCTTAGCTTTACATGGGCCGCCTACTCCGCGAGGCACCCGGGCAT
GTACTTCATCGCCATGAACTACACGGTGCACGCAGTCATGTACTCGTACT
ACTTTCTGATGGCCATCAAGGCGAAGCCCAAATGGCTCAAGTACGTAAGG
GGGGGGTAAAGGAAGCAATCGGGAGGAGCTCTACCGCCGAGAGTGCGAAG
GCATCGGGAGCTCTGTACAGGACGCCACGCTCGTTGCCGCCCAACCTGTA
TGGCTAACCAGCCAGCTCATCACTTCTCTTTCTATTCTGCTTCCACACCC
CCACACCCCCCTTAAAGTCCCATATATATCACCTTTCTCCAGATCTTCCA
GATGGTGGCTGGCGTCATCATCACCGTCTATGGCTTCATCTACGCGCGAG
ACCCATCCACCTGCGGAGTAGTGCCAAGTGTGCTGTACTTTCAGTCCGTC
ATTTATGGCTCCtacctctacctcttcctcgaatTTCTGGTCAAACGCTT
TTTCTGCCCCCCCCAGTCGGTTCCTCCGGCGTCGAGACccgtgggaaaag
aggaccaagggcgggaagaaggatggaagaCGGCCATGACGAATGGAGCA
GGCACACATTTTAAAAAGGCCCAATAGGAGGCATGTTCTGATTGTGGACG
TGGGCAGGTGGAGAAGCAGGCTAGATGTGTATTGTTTTCCAGCACAATTT
TGATCGGGAAGGACGGCAGGAGAGTGGAGAGGTGTGGTGTGGTCATAATT
ATCGTCTTGAAGGTCAAGGGGGAGATGATAGCGCGTGGGATCGCTCCAGT
GGGGTAAAAAGGGCGAGATACCAGCAAAAAGACAAGACAGGAAGGGCAGC
GCATGCCATGTGCAAAAAGGGGATCGGGTAATGTGGTTGCAGGGTGAGAC
GATTAGGGTAGTGTTTGCTTGCACGATAATGTGAATTTTGTTTACCAAAA
ACTTGAGAGCTACTGAGATTCTCGTGACagagagacagagagaggCATGG
TAGGACTTCGAGGGGGAATTATAGAAGAAAGGCTGTCAACAGAGGGGCAC
GTTGGCACGACAGCCAAGAAAAAAGCTGGGATACCACATAAATCCCTCCC
AGCTTTAAAAATCAACGACGCAAAACTGGTCGGAAATGCGGACGTTCCGT
GGAATAAAGCATTGAATGAAACGcaggaaagaaggcttgCTTCGCGATGT
TCTCACTGCATTTTTGCCGAGGCAC back to topCoding sequence (CDS) from alignment at CM002464.1:698739..701263+ >rna4931 ID=rna4931|Name=rna4931|organism=Nannochloropsis gaditana|type=CDS|length=5070bp|location=Sequence derived from alignment at CM002464.1:698739..701263+ (Nannochloropsis gaditana)
ATGAGCGAAGCACTTGCCAATCTGAGTCACCCAtgtacctcctccttgta
ctgtcctccctccagcctggTCCCCGTCACGCGGGAGCTTGCGGGGCATA
CATACACGTTCCTTCAGTTCTGGCAGCTCTTTCCATGGAGCGAGCCCTTT
TACACAAGGCTCGAAAAAGAATTCGATGTCCGCCCGTGGTACTTATTCGT
GCACGCGAACGGCTGGCTGCCTGTTGTGAGTATTATACTGTATGCTGCCA
TGGTCCTGCTCTTACCCCCGATCACGTCCAAAAGGCCTGTCAAGTGCGAC
ACAGCCCTCGCCTACTGGAACCTCTTGCTGGCGGCGTTCTCCATCCTGGG
CGCCCTCCGCATCGTCCCCCACCTGCTTTGGTTCCTGACTACGCACTCCT
TCAAGGAGACAGTCTGCACGCCCCCGGAACGGATGAACGGAGACGGGGCT
TCGGGCCTCTGGTGCCTTTTGTTCACCCTCTCCAAGCTGGTGGAGCTCGT
TGACACCATGTTCGTCTGCCTGAAAGGCCGCAAGCCCATTTTCCTGCACT
GgTACCACCACGTCACCGTCCTTAGCTTTACATGGGCCGCCTACTCCGCG
AGGCACCCGGGCATGTACTTCATCGCCATGAACTACACGGTGCACGCAGT
CATGTACTCGTACTACTTTCTGATGGCCATCAAGGCGAAGCCCAAATGGC
TCAATCCCATATATATCACCTTTCTCCAGATCTTCCAGATGGTGGCTGGC
GTCATCATCACCGTCTATGGCTTCATCTACGCGCGAGACCCATCCACCTG
CGGAGTAGTGCCAAGTGTGCTGTACTTTCAGTCCGTCATTTATGGCTCCt
acctctacctcttcctcgaatTTCTGGTCAAACGCTTTTTCTGCCCCCCC
CAGTCGGTTCCTCCGGCGTCGAGACccgtgggaaaagaggaccaagggcg
ggaagaaggatggaagaCGGCCATGACGAATGGAGCAGGCACACATTTTA
AAAAGGCCCAATAGATGAGCGAAGCACTTGCCAATCTGAGTCACCCAtgt
acctcctccttgtactgtcctccctccagcctggTCCCCGTCACGCGGGA
GCTTGCGGGGCATACATACACGTTCCTTCAGTTCTGGCAGCTCTTTCCAT
GGAGCGAGCCCTTTTACACAAGGCTCGAAAAAGAATTCGATGTCCGCCCG
TGGTACTTATTCGTGCACGCGAACGGCTGGCTGCCTGTTGTGAGTATTAT
ACTGTATGCTGCCATGGTCCTGCTCTTACCCCCGATCACGTCCAAAAGGC
CTGTCAAGTGCGACACAGCCCTCGCCTACTGGAACCTCTTGCTGGCGGCG
TTCTCCATCCTGGGCGCCCTCCGCATCGTCCCCCACCTGCTTTGGTTCCT
GACTACGCACTCCTTCAAGGAGACAGTCTGCACGCCCCCGGAACGGATGA
ACGGAGACGGGGCTTCGGGCCTCTGGTGCCTTTTGTTCACCCTCTCCAAG
CTGGTGGAGCTCGTTGACACCATGTTCGTCTGCCTGAAAGGCCGCAAGCC
CATTTTCCTGCACTGgTACCACCACGTCACCGTCCTTAGCTTTACATGGG
CCGCCTACTCCGCGAGGCACCCGGGCATGTACTTCATCGCCATGAACTAC
ACGGTGCACGCAGTCATGTACTCGTACTACTTTCTGATGGCCATCAAGGC
GAAGCCCAAATGGCTCAATCCCATATATATCACCTTTCTCCAGATCTTCC
AGATGGTGGCTGGCGTCATCATCACCGTCTATGGCTTCATCTACGCGCGA
GACCCATCCACCTGCGGAGTAGTGCCAAGTGTGCTGTACTTTCAGTCCGT
CATTTATGGCTCCtacctctacctcttcctcgaatTTCTGGTCAAACGCT
TTTTCTGCCCCCCCCAGTCGGTTCCTCCGGCGTCGAGACccgtgggaaaa
gaggaccaagggcgggaagaaggatggaagaCGGCCATGACGAATGGAGC
AGGCACACATTTTAAAAAGGCCCAATAGATGAGCGAAGCACTTGCCAATC
TGAGTCACCCAtgtacctcctccttgtactgtcctccctccagcctggTC
CCCGTCACGCGGGAGCTTGCGGGGCATACATACACGTTCCTTCAGTTCTG
GCAGCTCTTTCCATGGAGCGAGCCCTTTTACACAAGGCTCGAAAAAGAAT
TCGATGTCCGCCCGTGGTACTTATTCGTGCACGCGAACGGCTGGCTGCCT
GTTGTGAGTATTATACTGTATGCTGCCATGGTCCTGCTCTTACCCCCGAT
CACGTCCAAAAGGCCTGTCAAGTGCGACACAGCCCTCGCCTACTGGAACC
TCTTGCTGGCGGCGTTCTCCATCCTGGGCGCCCTCCGCATCGTCCCCCAC
CTGCTTTGGTTCCTGACTACGCACTCCTTCAAGGAGACAGTCTGCACGCC
CCCGGAACGGATGAACGGAGACGGGGCTTCGGGCCTCTGGTGCCTTTTGT
TCACCCTCTCCAAGCTGGTGGAGCTCGTTGACACCATGTTCGTCTGCCTG
AAAGGCCGCAAGCCCATTTTCCTGCACTGgTACCACCACGTCACCGTCCT
TAGCTTTACATGGGCCGCCTACTCCGCGAGGCACCCGGGCATGTACTTCA
TCGCCATGAACTACACGGTGCACGCAGTCATGTACTCGTACTACTTTCTG
ATGGCCATCAAGGCGAAGCCCAAATGGCTCAATCCCATATATATCACCTT
TCTCCAGATCTTCCAGATGGTGGCTGGCGTCATCATCACCGTCTATGGCT
TCATCTACGCGCGAGACCCATCCACCTGCGGAGTAGTGCCAAGTGTGCTG
TACTTTCAGTCCGTCATTTATGGCTCCtacctctacctcttcctcgaatT
TCTGGTCAAACGCTTTTTCTGCCCCCCCCAGTCGGTTCCTCCGGCGTCGA
GACccgtgggaaaagaggaccaagggcgggaagaaggatggaagaCGGCC
ATGACGAATGGAGCAGGCACACATTTTAAAAAGGCCCAATAGATGAGCGA
AGCACTTGCCAATCTGAGTCACCCAtgtacctcctccttgtactgtcctc
cctccagcctggTCCCCGTCACGCGGGAGCTTGCGGGGCATACATACACG
TTCCTTCAGTTCTGGCAGCTCTTTCCATGGAGCGAGCCCTTTTACACAAG
GCTCGAAAAAGAATTCGATGTCCGCCCGTGGTACTTATTCGTGCACGCGA
ACGGCTGGCTGCCTGTTGTGAGTATTATACTGTATGCTGCCATGGTCCTG
CTCTTACCCCCGATCACGTCCAAAAGGCCTGTCAAGTGCGACACAGCCCT
CGCCTACTGGAACCTCTTGCTGGCGGCGTTCTCCATCCTGGGCGCCCTCC
GCATCGTCCCCCACCTGCTTTGGTTCCTGACTACGCACTCCTTCAAGGAG
ACAGTCTGCACGCCCCCGGAACGGATGAACGGAGACGGGGCTTCGGGCCT
CTGGTGCCTTTTGTTCACCCTCTCCAAGCTGGTGGAGCTCGTTGACACCA
TGTTCGTCTGCCTGAAAGGCCGCAAGCCCATTTTCCTGCACTGgTACCAC
CACGTCACCGTCCTTAGCTTTACATGGGCCGCCTACTCCGCGAGGCACCC
GGGCATGTACTTCATCGCCATGAACTACACGGTGCACGCAGTCATGTACT
CGTACTACTTTCTGATGGCCATCAAGGCGAAGCCCAAATGGCTCAATCCC
ATATATATCACCTTTCTCCAGATCTTCCAGATGGTGGCTGGCGTCATCAT
CACCGTCTATGGCTTCATCTACGCGCGAGACCCATCCACCTGCGGAGTAG
TGCCAAGTGTGCTGTACTTTCAGTCCGTCATTTATGGCTCCtacctctac
ctcttcctcgaatTTCTGGTCAAACGCTTTTTCTGCCCCCCCCAGTCGGT
TCCTCCGGCGTCGAGACccgtgggaaaagaggaccaagggcgggaagaag
gatggaagaCGGCCATGACGAATGGAGCAGGCACACATTTTAAAAAGGCC
CAATAGATGAGCGAAGCACTTGCCAATCTGAGTCACCCAtgtacctcctc
cttgtactgtcctccctccagcctggTCCCCGTCACGCGGGAGCTTGCGG
GGCATACATACACGTTCCTTCAGTTCTGGCAGCTCTTTCCATGGAGCGAG
CCCTTTTACACAAGGCTCGAAAAAGAATTCGATGTCCGCCCGTGGTACTT
ATTCGTGCACGCGAACGGCTGGCTGCCTGTTGTGAGTATTATACTGTATG
CTGCCATGGTCCTGCTCTTACCCCCGATCACGTCCAAAAGGCCTGTCAAG
TGCGACACAGCCCTCGCCTACTGGAACCTCTTGCTGGCGGCGTTCTCCAT
CCTGGGCGCCCTCCGCATCGTCCCCCACCTGCTTTGGTTCCTGACTACGC
ACTCCTTCAAGGAGACAGTCTGCACGCCCCCGGAACGGATGAACGGAGAC
GGGGCTTCGGGCCTCTGGTGCCTTTTGTTCACCCTCTCCAAGCTGGTGGA
GCTCGTTGACACCATGTTCGTCTGCCTGAAAGGCCGCAAGCCCATTTTCC
TGCACTGgTACCACCACGTCACCGTCCTTAGCTTTACATGGGCCGCCTAC
TCCGCGAGGCACCCGGGCATGTACTTCATCGCCATGAACTACACGGTGCA
CGCAGTCATGTACTCGTACTACTTTCTGATGGCCATCAAGGCGAAGCCCA
AATGGCTCAATCCCATATATATCACCTTTCTCCAGATCTTCCAGATGGTG
GCTGGCGTCATCATCACCGTCTATGGCTTCATCTACGCGCGAGACCCATC
CACCTGCGGAGTAGTGCCAAGTGTGCTGTACTTTCAGTCCGTCATTTATG
GCTCCtacctctacctcttcctcgaatTTCTGGTCAAACGCTTTTTCTGC
CCCCCCCAGTCGGTTCCTCCGGCGTCGAGACccgtgggaaaagaggacca
agggcgggaagaaggatggaagaCGGCCATGACGAATGGAGCAGGCACAC
ATTTTAAAAAGGCCCAATAG back to top
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