EWM25755.1, cds4919 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|585107618|gb|EWM25755.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0 Query: 1 MSEALANLSHPCTSSLYCPPSSLVPVTRELAGHTYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPPQSVPPASRPVGKEDQGREEGWKTAMTNGAGTHFKKAQ 337 MSEALANLSHPCTSSLYCPPSSLVPVTRELAGHTYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPPQSVPPASRPVGKEDQGREEGWKTAMTNGAGTHFKKAQ Sbjct: 1 MSEALANLSHPCTSSLYCPPSSLVPVTRELAGHTYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPPQSVPPASRPVGKEDQGREEGWKTAMTNGAGTHFKKAQ 337
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|585107617|gb|EWM25754.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 377.867 bits (969), Expect = 5.176e-128 Identity = 177/289 (61.25%), Postives = 224/289 (77.51%), Query Frame = 0 Query: 12 CTSSLYCPPSSLVPVTRELAGH--TYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPVK-CDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFF 297 CTS YCPP +L TR TY+F+QFWQL+PW E FY EK F+ P + FV N W+ +S+ +Y +M++ LP I KRP+K T LA WNL LA +S +GA+R+VPHLLWF++TH+FK+TVCT P +NGDGA+GLW LFTLSK+ EL+D++++CLKGR+PIFLHWYHHV+VL FTWAA+ A HPGMYFIAMNYTVH+VMY+YYFLMAIKAKPKWLNPIYITF+QI QM+ GVII+ +GF Y+ ++C V P VL +VIY SYLYLF++F++KRFF Sbjct: 12 CTSQWYCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF 300
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|585102147|gb|EWM21810.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 273.863 bits (699), Expect = 1.267e-86 Identity = 136/278 (48.92%), Postives = 187/278 (67.27%), Query Frame = 0 Query: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKR------PVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMN-GDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPPQSVPPAS 307 F+Q +Q PW EPFY EK FDV + + N LP+V+ ILY + ++ +R P+ A+WN LAAFS+LGA R+VPH L+ T FK TVC P++ GDGA+G+W +LFT+SKL ELVDT+ + LKG+ P+FLHWYHHVTVL +TW +YSAR+PG+YF+AMNY+VHA+MYSYYFLM ++ PKW NP++IT QI QM+ GV ITV F ++RDPS C +V ++ + + +Y +YLY F+ F ++RFF + P + Sbjct: 33 FVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPS-CALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKPAAPGA 309
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|585112414|gb|EWM29833.1| (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 242.276 bits (617), Expect = 1.117e-74 Identity = 136/296 (45.95%), Postives = 189/296 (63.85%), Query Frame = 0 Query: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKR------PVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASG-LWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPPQSVPPASRPVGKE------DQGREE 319 F+Q +Q P EPFYT EK FDV + + + W+P++++ILY + ++ +R PV A WN LA FSI GALR+VPH L+ T FKETVC P+ + LW +LFT+SK+ EL+DT+ + LKG+ P+FLHWYHHVTVL +TW +YSAR+PG+YFIAMNYTVHAVMYSYYFLM ++ PKWL+P++IT +QI QM+ GV +T + Y DPS C VV ++ + + +Y +YLY F+EF V+RF P S+ K+ ++GR++ Sbjct: 27 FVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQADPS-CAVVRDLIPWCAAMYATYLYFFVEFFVERFLAASTKRTPVSKLASKDIGAAPSNEGRDK 321
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|585110649|gb|EWM28304.1| (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 242.276 bits (617), Expect = 1.184e-74 Identity = 121/279 (43.37%), Postives = 166/279 (59.50%), Query Frame = 0 Query: 36 TFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPI-TSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFC-PPQSVPPASRPVGK 312 TF Q +Q+ P EPFY EK++D P Y ++ + W+P+ +ILY + + +++P LAYWNL L+ FSI+G +R+VPHL++ T C PE + G+ A G W F LSKL EL+DT F+ L+ + FLHWYHHVTVL FTW Y+ +PG+ F+AMNY+VHA+MY YYFLMA++ +P WL P +IT +QI QMV GV + + R C V +L V+Y +YLYLF EF V+RF P + P V K Sbjct: 40 TFTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKAGVSK 318
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|553192576|ref|XP_005855601.1| (fatty-acyl [Nannochloropsis gaditana CCMP526] >gi|422293464|gb|EKU20764.1| fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 231.876 bits (590), Expect = 1.134e-70 Identity = 129/266 (48.50%), Postives = 165/266 (62.03%), Query Frame = 0 Query: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGW--LPVVSIILYAAMVLLLPPITSKRPV-KCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYS-ARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYA-RDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFF 297 F Q +Q +P PFYT EK F + F N W LP+ +Y M+++ + RP + TALA WNLLL+ FS G LR VPHLL +TT FK+T+C P G+GA GLW +LF SK+ ELVDT+F+ + K FLHWYHH+TVL F W +Y+ G+YF+AMNY+VHAVMY+YY+L AIKA P W+ P IT QI QM+ GV I V F Y DP C V P +Y +++YGSYLYLF +F V+RF Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQ-NTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFL 295
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|585111978|gb|EWM29442.1| (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 231.876 bits (590), Expect = 4.285e-70 Identity = 129/265 (48.68%), Postives = 165/265 (62.26%), Query Frame = 0 Query: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGW--LPVVSIILYAAMVLLLPPITSKRPV-KCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYS-ARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYA-RDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296 F Q +Q +P PFYT EK F + F N W LP+ +Y M+++ + RP + TALA WNLLL+ FS G LR VPHLL +TT FK+T+C P G+GA GLW +LF SK+ ELVDT+F+ + K FLHWYHH+TVL F W +Y+ G+YF+AMNY+VHAVMY+YY+L AIKA P W+ P IT QI QM+ GV I V F Y DP C V P +Y +++YGSYLYLF +F V+RF Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQ-NTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRF 294
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|256750562|gb|ACV21066.1| (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 219.935 bits (559), Expect = 5.760e-66 Identity = 125/286 (43.71%), Postives = 170/286 (59.44%), Query Frame = 0 Query: 16 LYCPPSSLVPVTRELAGHTYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGW--LPVVSIILYAAMVLLLPPITSKRPV-KCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYS-ARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYA-RDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296 L PS +VP F Q +Q +P +P YT+ EK F + F + W LP+ +YA M+++ + RP + TALA WNL+L+ FS G +R VPHLL + T FK+T+C P G+GA G+W +LF SK+ ELVDT+F+ + K FLHWYHH+TVL F W +Y+ G+YF+AMNY+VHA+MY+YY+L AI A PKW+ P IT QI QM+ GV I F + DP C V +Y +++YGSYLYLF +F V+RF Sbjct: 14 LKADPSKIVPYKS--IPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQ-DTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 296
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|219129110|ref|XP_002184740.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403849|gb|EEC43799.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 213.001 bits (541), Expect = 3.032e-64 Identity = 108/235 (45.96%), Postives = 154/235 (65.53%), Query Frame = 0 Query: 67 VHANGWLPVVSIILYAA-MVLLLPPITSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARH-PGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIY---ARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296 + A+ +P+ + +LY MV ++ P++ T+LA WNL LA FS++G LR P L+ L T + +E +C P+ G G++GLW LF LSK EL+DT+F+ + +K IFLHWYHH+TVL + W +Y + PG++F+ MNYTVHA MY YYFLMAI+A+P+WLNP+ +T +QI QMV GV +T+ GF Y A D +C + V+YGSYL+LFL+F V R+ Sbjct: 1 MEAHPLVPIGACLLYGLLMVAGQAYFRTREPLRARTSLAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGRY 235
BLAST of EWM25755.1 vs. NCBI_GenBank
Match: gi|1210521613|dbj|GAX19603.1| (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 207.608 bits (527), Expect = 1.100e-61 Identity = 114/273 (41.76%), Postives = 153/273 (56.04%), Query Frame = 0 Query: 32 GHTYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPV-KCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHP-GMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPPQS 302 G + +F L+P E YT EK +D P ++ +PV + I+YA + +KR LA WNL L+ FS +G LR PHL LT SF++ +C P G G++GLW LF LSK EL+DT F+ + + IFLHWYHH+TVL + W +Y P G+ F AMNYTVHA MY YYFLMA++ KPKW NP+ IT +QI QMV GV T+ + Y + C + ++YGSYL+LF +F R+F S Sbjct: 11 GDNLEYREFSCLYPQVEHLYTSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYFSLKSS 283 The following BLAST results are available for this feature:
BLAST of EWM25755.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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