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Properties
| Property Name | Value |
|---|
| Product | glycine cleavage system regulatory protein |
| Orig transcript id | gnl|cribi|Naga_100021g72.8794.mrna |
| Orig protein id | gnl|cribi|Naga_100021g72.8794 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:611982..615711 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4893 ID=rna4893|Name=rna4893|organism=Nannochloropsis gaditana|type=mRNA|length=2377bp
CGGGGCCTCGTAATGGCCGTACGCGACCTTTTCTCTCTACAAGCGTGGCA
TTCTCTCAGAGGATCTGATTGTATTACAGCTGCCTGGGTGCGTGGTCTTG
TTCATATTGCCGCAGCGAAAAACGGGATGGGTTGAGAAGGAGGGGGAAAC
TCCTTCCTCATTCAATCCTTTGCAAAGGAACAGGCACACCACAACCTTTT
TCGATCACCTGTATGAATCCTTTCACTTTGATTGAAAAAGATGGTGGATA
TCAGACTCATTGTGTTCGCGGAGGATGTCATCAATCCAGTTGTCAAAATC
TGCAACACTCCCCTCTTTTCGCTTTTCTGTGCGCGCCCATTCACCAAAAT
TGGCATTCGAAGAACCTCAAAATCATAACGCTGCTCACTGATTGACATTC
CACCTTCCTTCACTTGTGACACAGAAGAGATTCTTTGCTCGCTCCCGGTT
CACCCCGCTTGCTTGCCAAGTTCTTTCAAATTAACTCTCAACCCGCTTCC
AAAAAATCCTTAACTATCGACCATGCGTGAGTGCATCTCTATCCACGTCG
GCCAGGGCGGCATCCAGACGGGCAATGCCTGCTGGGAGCTCTACTGCCTT
GAACATGGCATTCAGCCTGACGGGCAAATGCCGTCTGAGAAGACCATCGG
AGGCGGAGACGACGCTTTCAACACGTTTTTCTCCGAGACGGGCGCCGGCA
AGCACGTCCCCCGTGCTGTCTACGTCGATCTGGAGCCGACAGTGTGCGAT
GAAGTCCGCACGGGCACGTACCGTCAGCTCTACCATCCCGAGCAGATCAT
CTCGGGTAAGGAGGATGCTGCCAACAACTACGCCCGCGGGCACTATACCA
TCGGGAAGGAGATCGTGGACTTGGTGCTCGACCGTGTGCGCAAGCTGGCG
GACAACTGCACGGGCCTCCAAGGTTTTCTCATCTTCCACGCCACGGGCGG
TGGCACCGGCTCGGGCCTCGGCGCGCTGCTCCTGGAGCGTCTATCTGTGG
ATTACGGGCGCAAGTCCAAGCTGTCTTTCGCTGTGACACCTGCGCCCCAG
GTGGCCACCGCCGTGGTCGAGCCCTACAACTCCGTCCTGTCCACCCATGC
CCTGCTTGAGCATACCGACGTGACTTTCTGCTTGGATAACGAAGCTCTCT
ACGACACGTGCCGCCGCAACCTTGATATTGAGCGCCCCACGTACACGAAT
CTGAACAGGCTCATCGCCCAGGTCATCTCCTCCTTGACCGCTTCTCTGCG
TTTCGACGGCGCTCTCAATGTGGATGTGACAGAGTTCCAGACCAACCTGG
TACCCTACCCCCGCATTCACTTCATGCTCACGTCCTATGCGCCCGTGATC
TCTGCGGAGAAGGCCTACCACGAGCAGCTCTCTGTGGCCGAGATTACCAA
CTCGGTCTTCGAGCCCGCGAACATGATGACCAAGTGCGACCCCCGTCACG
GCAAGTACATGGCCTGCTGCCTCATGTACCGCGGTGACGTGGTCCCCAAG
GATGTCAACGCCGCGGTGGCCACCATCAAGACTAAGCGCACGATCCAGTT
CGTGGACTGGTGCCCCACCGGCTTCAAGTGCGGCATCAACTACCAGCCCC
CCACCGTGGTGCCTGGCGGCGACCTGGCCCGCGTCCAGCGCGCAGTCTGC
ATGGTGGCGAATACCACGGCCATCGCCGAGGCCCTTTCCCGCATCGACCA
CAAGTTCGACCTCATGTACGCCAAGCGTGCTTTCGTCCACTGGTATGTAG
GTGAGGGTATGGAGGAGGGTGAATTCTCTGAGGCGCGTGAGGATCTGGCC
GCGCTGGAGAAGGATTACGAGGAGGTTGGTGCGGAGACGGCCGATGCGGA
CGGGGAGGGTGAAGAGGGTGAAGAGTACTAAGAAGGGCCGGGTCGAACGG
GAGATGTAGAGTGGGTTTATACCAGCATCAGTAAGACGGTGGCTGAGTCT
TAATCATTCAGTGGATTGGGGACTGTTGCATGTGATCTCGGGTCACCAGC
TTTCATCCCTGTGTCATGTGTCCGTAAGGAGGTGTTTTCAACGTCACAGA
CTCAGAATATTCACGCATCGATAATAAGGGGTATCGGAACGCACAAAAAG
GAATACGGGATATCTTTGTGAGTGAGACCTGACGTTCCTAGTCTGATTGC
TACTCTAAATGCTTCTATTCTCGAATGCACCTCCTCTTCATATCAGTCTA
TGCTTCCTGTTTGATGAGCTAGGCCCCTCAAACCCATGCGTGTCAGGGGA
AGGACGCTGGATGTGCCGTGACCTTGAGTCACACCACGTGTGCAAAATGT
CCTCGACGAGAGTGGAACACAATCACCAGTCTGCGCTCAGAAGAAAAAGA
AATAAGTATGATGGTGCTCTTCCGCTT back to topprotein sequence of rna4893 >rna4893-protein ID=rna4893-protein|Name=rna4893|organism=Nannochloropsis gaditana|type=polypeptide|length=268bp
MKVLASLTFDLTLGGSKRSFIDPNTPSHLEFLFNFHTCFPPALPGQDAAM
LSTFSSNLKRAAMHPTMMHMVRVNLARAGMVSVSRASTPADSHFILTATG
PDRAGIVFDIAKLVLDNNGDIQESRMMRMGCDFSLMMRVAAPKPDADQIT
QKLGKVGGMSVITHPVTAERANQVVPKPAWKANFNVEGVNHPGLVYKVTE
LFFARGLRVEKLHTDTKIAPFGGTVLFLMDGTIISDKPIDFADLKEASES
LSSFLGIDLDLKPLPTSE back to topmRNA from alignment at CM002464.1:611982..615711- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4893 ID=rna4893|Name=rna4893|organism=Nannochloropsis gaditana|type=mRNA|length=3730bp|location=Sequence derived from alignment at CM002464.1:611982..615711- (Nannochloropsis gaditana)
CGCGCACTTCCGCAATCATGCTCGTGCCGTCCACCTACAATGATGCCGGG
AACATAGCGCAGCACCGTGCCGGTTTCGTTGATCTCCACCTGACATCCGT
TGGTCAAGCGCTCCAGCAGGCGCAAGAAGCCTCCTTCGAAGTCCCGCAGC
CCCGGTTCCTCCTCCTCCGACCGGATGTGCGTGATAAGCAAGGGCCTCCC
GCTCAACGTAGCACAAACGAGGCGTTGCCGAAAGTTGTTGCACCCTTTAA
ACTTCATAGTCGACATTTTGGCGTGCAAAGGCTGAAACGCAACTAGGACA
GTAGAAGTCTGGTGCTTAGATACTTTGGCAGGGGTGGAAGGAAACAAGTG
AAATTAGCAATGCCTGGGTGCAAAAAAAGAGTCGATCATGACGGACATTA
AACGGAAGCAAACACAGAGTCAGGATCTCTTCGCAAGCGAAGCCAGGAAA
CAGTTCATGTCACGTCAATTGTGTGGATGGGGTGGTTGAGGTGACGGTGA
AAGGGAAGACAAGGGCAAGGTTGGACGATCGCAGCTTCCAATCCTCCAAC
GAGCTTGCTCAGAAAGACTTAAATTGCACGCTCCTCTGTCATTTAAGAAG
ATTTAAACGAGAGAGATGAAGAGAGGGGGGCAGGCAGGGTCAAAGCCGAA
GGCCGGGCTCAAGCCGGACACGGGAACGTGAAGAGAGGAAACTGCTGGCG
TGCTGGGATAAGGTCAGGAAGGAAACAGGCGGCTAAACAGGTGAAAATGG
CCAGGTACCATCGAGCCCGCTGTGAACAACAGTGTGCGCGATCGCTATGA
TTGGGCATGTTCGGCTCGTGGGCTGAATGTGGCCCGGACTCGAAATGAAA
CGCGTTGTCGCCATAGAGGGGCCATCGCTGAGGCCTTCTCGTGAGGGCGG
TGCATTTGAGAACTTGGCTTTGGCAGGGCGCTTGCCCGCGGAAAGATCGA
CACCGCGTTCTAGAACGCACGTTGTCTGTAACAAGTGCCATTATCATGAA
GGTCTTAGCATCCTTGACTTTTGATTTGACACTGGGGGGTTCTAAACGTA
GCTTCATCGATCCGAACACCCCTTCTCACTTGGAGTTCCTCTTCAACTTC
CATACTTGCTTCCCACCAGCTTTGCCGGGACAAGACGCAGCCATGCTCTC
CACTTTTTCATCAAATTTGAAGCGGGGTGCGTCGTAGTGGGATATTAGGG
CCCTCTTACGGTTTTGTAAACAAATTTTATCTTTTCCTACGCTCCCTTTT
TTCGCGTTGAGGGAGAATGCTTCCATCTGCTAGTCATCCCTGATGGGTGA
CTGCACTTGCCCAATGTGCATTTTGAATCAGTATACTGCTTCTGCTGAAA
AGTGTGTTGTGTTATGGGTCAATGATTTGAAAGATCCTCGTTCAAGTCCA
TTAAATAGAATACATCCGGTTTACCTCCGCATATTTTCTTACCAGCTGCC
ATGCATCCGACAATGATGCACATGGTACGTGTAAATTTGGCGCGTGCAGG
CATGGTCTCTGTGTCACGTGCGTCCACCCCCGCCGACTCCCATTTCATTC
TCACGGCCACGGGGCCAGACCGCGCCGGCATTGTCTTCGACATCGCCAAG
CTGGTCTTGGACAACAATGGAGATATCCAGGAATCAAGAATGATGCGCAT
GGGCTGTGACTTCTCATTGATGATGCGCGTGGCCGCACCGAAGCCAGACG
CGGACCAAATCACTCAAAAGCTCGGGAAGGTAGGAGGCATGTCAGTCATT
ACCCATCCGGTCACCGCGGAGCGGGCCAACCAAGTCGTGCCGAAGCCTGC
ATGGAAGGCAAATTTCAACGTAGAGGGCGTGAACCACCCGGGTTTGGTAT
ACAAGGTTACTGAGCTATTCTTTGCGCGAGGCCTGAGGGTCGAGAAGCTG
CACACGGACACGAAAATTGCCCCGTTCGGGGGCACGGTCTTATTCTTGAT
GGACGGGACGATTATTTCGGATAAACCGATTGATTTCGCTGACCTGAAGG
AGGCTTCAGAGAGCCTGTCTTCTTTTTTAGGTATCGACCTTGACTTGAAG
CCCTTGCCGACGAGTGAGTAATCATATGTAAACCATGACGTTGCAATCGA
AAAAATTGACTCTGACCTTCCTCCGCGTAAGAGACTGCCTGTGGGGAAAT
TGCATGAGTGGCCTTCGCTTGCCTGTCATTTTATTGCTCTTGGTGTTTAT
TGAATGCTCAAAAGACGGCATAGATGAAATATGGAAGGCAGGAGGTGAGC
AGACCGGGGACCACCCAAAGGAACCGAAGAAATGTGACGAAAGCGTCGTC
TCTGTGGTGGCAGTGATTTGCGAAGCGGAAGAGCACCATCATACTTATTT
CTTTTTCTTCTGAGCGCAGACTGGTGATTGTGTTCCACTCTCGTCGAGGA
CATTTTGCACACGTGGTGTGACTCAAGGTCACGGCACATCCAGCGTCCTT
CCCCTGACACGCATGGGTTTGAGGGGCCTAGCTCATCAAACAGGAAGCAT
AGACTGATATGAAGAGGAGGTGCATTCGAGAATAGAAGCATTTAGAGTAG
CAATCAGACTAGGAACGTCAGGTCTCACTCACAAAGATATCCCGTATTCC
TTTTTGTGCGTTCCGATACCCCTTATTATCGATGCGTGAATATTCTGAGT
CTGTGACGTTGAAAACACCTCCTTACGGACACATGACACAGGGATGAAAG
CTGGTGACCCGAGATCACATGCAACAGTCCCCAATCCACTGAATGATTAA
GACTCAGCCACCGTCTTACTGATGCTGGTATAAACCCACTCTACATCTCC
CGTTCGACCCGGCCCTTCTTAGTACTCTTCACCCTCTTCACCCTCCCCGT
CCGCATCGGCCGTCTCCGCACCAACCTCCTCGTAATCCTTCTCCAGCGCG
GCCAGATCCTCACGCGCCTCAGAGAATTCACCCTCCTCCATACCCTCACC
TACATACCAGTGGACGAAAGCACGCTTGGCGTACATGAGGTCGAACTTGT
GGTCGATGCGGGAAAGGGCCTCGGCGATGGCCGTGGTATTCGCCACCATG
CAGACTGCGCGCTGGACGCGGGCCAGGTCGCCGCCAGGCACCACGGTGGG
GGGCTGGTAGTTGATGCCGCACTTGAAGCCGGTGGGGCACCAGTCCACGA
ACTGGATCGTGCGCTTAGTCTTGATGGTGGCCACCGCGGCGTTGACATCC
TTGGGGACCACGTCACCGCGGTACATGAGGCAGCAGGCCATGTACTTGCC
GTGACGGGGGTCGCACTTGGTCATCATGTTCGCGGGCTCGAAGACCGAGT
TGGTAATCTCGGCCACAGAGAGCTGCTCGTGGTAGGCCTTCTCCGCAGAG
ATCACGGGCGCATAGGACGTGAGCATGAAGTGAATGCGGGGGTAGGGTAC
CAGGTTGGTCTGGAACTCTGTCACATCCACATTGAGAGCGCCGTCGAAAC
GCAGAGAAGCGGTCAAGGAGGAGATGACCTGGGCGATGAGCCTGTTCAGA
TTCGTGTACGTGGGGCGCTCAATATCAAGGTTGCGGCGGCACGTGTCGTA
GAGAGCTTCGTTATCCAAGCAGAAAGTCACGTCGGTATGCTCAAGCAGGG
CATGGGTGGACAGGACGGAGTTGTAGGGCTCGACCACGGCGGTGGCCACC
TGGGGCGCAGGTGTCACAGCGAAAGACAGCTTGGACTTGCGCCCGTAATC
CACAGATAGACGCTCCAGGAGCAGCGCGCC back to topCoding sequence (CDS) from alignment at CM002464.1:611982..615711- >rna4893 ID=rna4893|Name=rna4893|organism=Nannochloropsis gaditana|type=CDS|length=1614bp|location=Sequence derived from alignment at CM002464.1:611982..615711- (Nannochloropsis gaditana)
CTGCCATGCATCCGACAATGATGCACATGGTACGTGTAAATTTGGCGCGT
GCAGGCATGGTCTCTGTGTCACGTGCGTCCACCCCCGCCGACTCCCATTT
CATTCTCACGGCCACGGGGCCAGACCGCGCCGGCATTGTCTTCGACATCG
CCAAGCTGGTCTTGGACAACAATGGAGATATCCAGGAATCAAGAATGATG
CGCATGGGCTGTGACTTCTCATTGATGATGCGCGTGGCCGCACCGAAGCC
AGACGCGGACCAAATCACTCAAAAGCTCGGGAAGGTAGGAGGCATGTCAG
TCATTACCCATCCGGTCACCGCGGAGCGGGCCAACCAAGTCGTGCCGAAG
CCTGCATGGAAGGCAAATTTCAACGTAGAGGGCGTGAACCACCCGGGTTT
GGTATACAAGGTTACTGAGCTATTCTTTGCGCGAGGCCTGAGGGTCGAGA
AGCTGCACACGGACACGAAAATTGCCCCGTTCGGGGGCACGGTCTTATTC
TTGATGGACGGGACGATTATTTCGGATAAACCGATTGATTTCGCTGACCT
GAAGGAGGCTTCAGAGAGCCTGTCTTCTTTTTTAGGTATCGACCTTGACT
TGAAGCCCTTGCCGACGAGTGAGTAAATGAAGGTCTTAGCATCCTTGACT
TTTGATTTGACACTGGGGGGTTCTAAACGTAGCTTCATCGATCCGAACAC
CCCTTCTCACTTGGAGTTCCTCTTCAACTTCCATACTTGCTTCCCACCAG
CTTTGCCGGGACAAGACGCAGCCATGCTCTCCACTTTTTCATCAAATTTG
AAGCGGGCTGCCATGCATCCGACAATGATGCACATGGTACGTGTAAATTT
GGCGCGTGCAGGCATGGTCTCTGTGTCACGTGCGTCCACCCCCGCCGACT
CCCATTTCATTCTCACGGCCACGGGGCCAGACCGCGCCGGCATTGTCTTC
GACATCGCCAAGCTGGTCTTGGACAACAATGGAGATATCCAGGAATCAAG
AATGATGCGCATGGGCTGTGACTTCTCATTGATGATGCGCGTGGCCGCAC
CGAAGCCAGACGCGGACCAAATCACTCAAAAGCTCGGGAAGGTAGGAGGC
ATGTCAGTCATTACCCATCCGGTCACCGCGGAGCGGGCCAACCAAGTCGT
GCCGAAGCCTGCATGGAAGGCAAATTTCAACGTAGAGGGCGTGAACCACC
CGGGTTTGGTATACAAGGTTACTGAGCTATTCTTTGCGCGAGGCCTGAGG
GTCGAGAAGCTGCACACGGACACGAAAATTGCCCCGTTCGGGGGCACGGT
CTTATTCTTGATGGACGGGACGATTATTTCGGATAAACCGATTGATTTCG
CTGACCTGAAGGAGGCTTCAGAGAGCCTGTCTTCTTTTTTAGGTATCGAC
CTTGACTTGAAGCCCTTGCCGACGAGTGAGTAAATGAAGGTCTTAGCATC
CTTGACTTTTGATTTGACACTGGGGGGTTCTAAACGTAGCTTCATCGATC
CGAACACCCCTTCTCACTTGGAGTTCCTCTTCAACTTCCATACTTGCTTC
CCACCAGCTTTGCCGGGACAAGACGCAGCCATGCTCTCCACTTTTTCATC
AAATTTGAAGCGGG back to top
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