EWM25813.1, cds4833 (CDS) Nannochloropsis gaditana

Overview
NameEWM25813.1
Unique Namecds4833
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:487944..488105 +
Alignment locationCM002464.1:488235..488328 +
Alignment locationCM002464.1:488398..488486 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25813.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100021g15.8756.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:487944..488105 +
CM002464.1supercontigCM002464.1:488235..488328 +
CM002464.1supercontigCM002464.1:488398..488486 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25813.1 vs. NCBI_GenBank
Match: gi|585107680|gb|EWM25813.1| (hypothetical protein Naga_100021g15 [Nannochloropsis gaditana])

HSP 1 Score: 239.965 bits (611), Expect = 2.094e-80
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 MTGFTYQAAASPDNQFQVLYHTLRFISRSDPPARNQVNTGFCVSSHMMSSRHLFPHHKRAPTTSAYQTKFRYFLRDEPCPHNRSTEASVNWVRARCVIPYQKLLQAPRPLNLTK 114
            MTGFTYQAAASPDNQFQVLYHTLRFISRSDPPARNQVNTGFCVSSHMMSSRHLFPHHKRAPTTSAYQTKFRYFLRDEPCPHNRSTEASVNWVRARCVIPYQKLLQAPRPLNLTK
Sbjct:    1 MTGFTYQAAASPDNQFQVLYHTLRFISRSDPPARNQVNTGFCVSSHMMSSRHLFPHHKRAPTTSAYQTKFRYFLRDEPCPHNRSTEASVNWVRARCVIPYQKLLQAPRPLNLTK 114
The following BLAST results are available for this feature:
BLAST of EWM25813.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107680|gb|EWM25813.1|2.094e-80100.00hypothetical protein Naga_100021g15 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4845rna4845Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications