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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100021g15.8756.mrna |
| Orig protein id | gnl|cribi|Naga_100021g15.8756 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:487944..488486 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4845 ID=rna4845|Name=rna4845|organism=Nannochloropsis gaditana|type=mRNA|length=2292bp
ATGTTTTGGAGATCGTCATCGTCGCAGCAGCCACAGGGGTCCCCGCCTCC
ACCTTCGCAGCATGTAGGGGACGATGGCTATGACCAATATGTGTGGGAGG
AGGACGAAGAGACGCGGTCCATCGTAAACGCTGTCCGTTTTAATGAAAGT
CCTGAAATGGAAAGCATTGGCAGTGAGGATGGCATTGGTGAGGACCACGA
GGGCCTGGACGACGAGGAAGGAAGGGAAAGCCACCGGCGACCGTCGGGGT
CTCCCTTCTCATTTCTTTTCAATCGCTTCGGCCACGAGGAAGGAAGCCAG
CAGCTGCTCAGCGGAAGCCGCAGATCACTTCAAAAAATACATCCCAAGAA
TTCGCGCAACAGCATGAAGGCCGAATCGAGCGGCGGCAGCCTAGCGAGCA
TGGGGGCGTCACCACGCCCTTCCTCGCGAGGCTCCCCGACGGTGCCTCGG
CCGGCCAGCCGCTCCTCTACCCTCCGAGCCCGCTCTCCTCAGGCCAAGAG
CCTTCTCCGCGCCGATGCCATCGGCCAGAAGTCTCAGCAGCGGCTGGAGC
ACCTGCAAGTGCCGTCCAGCGAGGGCTTTGCCCCCGTACAGCGGTCCGGG
TCGGTGCCCGGGCGCCTTGGGGACACTTCATCGAAGCCATCCCACGCAGC
CATCGCAGCGGCACATCAGGCCGACCGCATGCGTGGAAGAGCGTGGGAGG
GGAGTGGGACGAGGGTGGATGAGATGACCGGGGCGTGGCAGGCGGTGTCC
ATGGGAGGGACGAAGAGATTGATGAGGGGCGACGGGTCACAGGTGATGAT
AGGCATCGGATCGGGAGAGTCGCGCAGTCACCTTCCCTCCTTAAACGATG
TGGGTCACTTCAAGGAGGATTTGGAAGGAGGAGAGGAGGAGGACGAGGAG
GGTTCTGCAGTGAACGCGCTGGTGACCTTCGGCTACTACCTGGTCATGCC
CGCCCTCAGCCTGTTCCACTGCTCCCACCGCATTCTCAGGTCCTACCCCG
TGCGCGTCCTCTCCTCCGTCATCCTCCTGGCCGGCCTCGCTCTCTGCGTC
ATCCTGGCAGCCGTGCATTTACCCATTCGACTGAATAAGCAGAAGAACGT
GAGGGGCGAACCACTGACATTCAGTCCTCCCGAGGGTCACATAGGGCCCA
TGCTGGGCGCGGCCGAGGGCGGTCTCTACCGGAACCTATTCGCCGAAATG
CTGCACAAGTCGGACGCAGAGGTGGAGAAAAAGCTACAGGATACCTGGCG
CTTTCTTTTCGAAGGCGATGTGAGCACGGAGGCCATCTACGTCCCGGTGG
GTGAGACGCCCGAGGGCGACAAGCTCGGCTACGTGCTCAACACGGAGAGC
GGGTGGGTGACGAGCGAGGCCATGTCCTACGGTATGATGGTGGCGGTGCA
GTACGACAGGAGAGAAACTTTCGACGCCCTCTGGTCCTGGGCCTCGCGTT
ACATGCGCCACGTGACAGGGCGGTACAAGGGCTTCTTTGCGTGGAAGTGC
TCCTTGGCGGGCCGGAAGCTCGACGGGACGCCCGCCCCGGACGCCGAGGA
GTGGATCGCGACGGCTCTCATTTTCGCGAACAACCGGTGGATGTCTCAGG
GCCGGTACGACTACGAGAAGGAGGCGGTGGCGCTTCTCCTGGGCATGGGG
GACCCGAGGCGAGGCATGTTCACCAAGCACGGCGAGGTCACGCTCAACCC
CGTGCGACCAGTCATCACGAACCCCTCCTACCACCTTCCGCACTTTTACG
AGGTCTGGGCGAGATTTCTTAACGATCGCGGCCAGTACCAGCTGGCTTCC
TTCTATTTGCAGGCGGCTGAGCGCTCTCGGCGACTGCTCCATAAGGCCGT
GGACCAACACACAGGCCTTTCGGCCGACTACACGGACTACGAGGGCGTCG
GTGTCAAGGACTTGGCGGGACACTCTAATTTCCAGTGGGACGCCTGGAGG
GTTGTGGCCAACGTGGCTGTTGACTGGTCCTGGTGGCGGCGCGACGCCTG
GCAGCAACGCGAAGCCGACACTTTGCAGGCATTTCTGATCCGGCAGGGCA
TCCAGGACTACCCCTCCACCTACGCCCTCAACGGAACGGCCCTCTTGAAG
AGCCACTCCGTAGGTCTGGTGGCCGTGAATGCCGTCGCCTCTCTGGCGGC
AACGGATAGGAACGTGGCTTCGGCCTTTGTGGCGGAATTATGGAACGCGG
CTATCCCCAGGAACCAATGGCGGTACTATAACGGCATGCTTGTCTTCCTC
TCTTTGCTGCAGGTTTCAGGCCGCTACCGGAGTCTGTATTGA back to topprotein sequence of rna4845 >rna4845-protein ID=rna4845-protein|Name=rna4845|organism=Nannochloropsis gaditana|type=polypeptide|length=114bp
MTGFTYQAAASPDNQFQVLYHTLRFISRSDPPARNQVNTGFCVSSHMMSS
RHLFPHHKRAPTTSAYQTKFRYFLRDEPCPHNRSTEASVNWVRARCVIPY
QKLLQAPRPLNLTK back to topmRNA from alignment at CM002464.1:487944..488486+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4845 ID=rna4845|Name=rna4845|organism=Nannochloropsis gaditana|type=mRNA|length=543bp|location=Sequence derived from alignment at CM002464.1:487944..488486+ (Nannochloropsis gaditana)
ATGACCGGGTTTACCTACCAGGCGGCGGCTTCTCCTGACAATCAATTTCA
AGTTCTTTATCATACGCTCCGCTTCATCTCACGTTCCGATCCACCCGCAC
GGAACCAGGTCAACACGGGTTTCTGTGTCTCTAGTCATATGATGTCAAGC
CGGCATCTTTTTGTTTCTGCTCTTAGAAAGTGAAGCGTGGAGCCCTTGTC
CATATAAACCAGGTTTTCTTGATGATCTTTCCTTTTAGCTGTTCTCTCAT
TCCTACCCACGCATACCTTCTGCACAATTATCCCTTCAAAGCCACATCAT
AAGAGGGCTCCCACGACCTCAGCCTACCAGACTAAATTCCGATACTTTTT
ACGGGATGAACCGTGCCCTCACAACCGTAGCACCGGTGCATGCGTGCAAT
TAGGGCAACAACTTTCGAACCTGGCTTTGTTTACTGCTTGATTGTTCCAT
TCAGAAGCAAGTGTGAATTGGGTACGGGCTAGATGCGTGATACCTTACCA
GAAGCTTCTGCAagctccaaggccgctgaATCTAACAAAATGA back to topCoding sequence (CDS) from alignment at CM002464.1:487944..488486+ >rna4845 ID=rna4845|Name=rna4845|organism=Nannochloropsis gaditana|type=CDS|length=1035bp|location=Sequence derived from alignment at CM002464.1:487944..488486+ (Nannochloropsis gaditana)
ATGACCGGGTTTACCTACCAGGCGGCGGCTTCTCCTGACAATCAATTTCA
AGTTCTTTATCATACGCTCCGCTTCATCTCACGTTCCGATCCACCCGCAC
GGAACCAGGTCAACACGGGTTTCTGTGTCTCTAGTCATATGATGTCAAGC
CGGCATCTTTTTCCACATCATAAGAGGGCTCCCACGACCTCAGCCTACCA
GACTAAATTCCGATACTTTTTACGGGATGAACCGTGCCCTCACAACCGTA
GCACCGAAGCAAGTGTGAATTGGGTACGGGCTAGATGCGTGATACCTTAC
CAGAAGCTTCTGCAagctccaaggccgctgaATCTAACAAAATGAATGAC
CGGGTTTACCTACCAGGCGGCGGCTTCTCCTGACAATCAATTTCAAGTTC
TTTATCATACGCTCCGCTTCATCTCACGTTCCGATCCACCCGCACGGAAC
CAGGTCAACACGGGTTTCTGTGTCTCTAGTCATATGATGTCAAGCCGGCA
TCTTTTTCCACATCATAAGAGGGCTCCCACGACCTCAGCCTACCAGACTA
AATTCCGATACTTTTTACGGGATGAACCGTGCCCTCACAACCGTAGCACC
GAAGCAAGTGTGAATTGGGTACGGGCTAGATGCGTGATACCTTACCAGAA
GCTTCTGCAagctccaaggccgctgaATCTAACAAAATGAATGACCGGGT
TTACCTACCAGGCGGCGGCTTCTCCTGACAATCAATTTCAAGTTCTTTAT
CATACGCTCCGCTTCATCTCACGTTCCGATCCACCCGCACGGAACCAGGT
CAACACGGGTTTCTGTGTCTCTAGTCATATGATGTCAAGCCGGCATCTTT
TTCCACATCATAAGAGGGCTCCCACGACCTCAGCCTACCAGACTAAATTC
CGATACTTTTTACGGGATGAACCGTGCCCTCACAACCGTAGCACCGAAGC
AAGTGTGAATTGGGTACGGGCTAGATGCGTGATACCTTACCAGAAGCTTC
TGCAagctccaaggccgctgaATCTAACAAAATGA back to top
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