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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100054g20.5576.mrna |
| Orig protein id | gnl|cribi|Naga_100054g20.5576 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:424154..426347 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4810 ID=rna4810|Name=rna4810|organism=Nannochloropsis gaditana|type=mRNA|length=4905bp
GAGCGCCCATGCGCGCGATACCCTGGAGTCCGCCCCTATTATGCCCTGCC
GCGTACGATTCCTGCTCCGTTGCTGATGCGAGGAGCGTGGTGATATTGTC
ACCGTGGACGTATTGAGTGCGGCGGTGCGTTTTGCCAGCGGCGTCTGCCC
CGCAATGGCCTACTGCTCGCTAAAACAGGACTTCTTTCTCACTACCATCG
TCGTCTCCGCTCTTACCTTGCTGTGAACAAAGTCACTGCTTCAATTCGGG
AGGAATCCCGCGTGCACCTCTTGATTTGTCTGTCACATGCGCACATGGTC
TCAGTACGTGACCTTTCTCGGGGGGTTAGCCCCGGCCAGGGGAGTTCAGC
CAACTGCACCTTGTGTTCATGATGACATTGTCCTCATGTGTGCGATCATT
TTGACATTCCCGTATTTAATCCGACATTACGGGGCTGATATCCTGTTTTA
AACACCATAATGTAACGTCTCCTCTTTGTTTGGCTTGTTCCATGTCTTAC
CCTTTCCGCGTTTGATGTGCTTTTCTGGCCCGGTCCTTGGACCTGGTTAC
CATCGACACTGTACAGGGGGTGGCCGCTGCGCCGCAAAACACGGCGCTGC
AAGCATGAGCATCAGCAGTACGATCAATCAGATCACTCGCAATGCCCGGG
CGGCGGTAGGGCAAATCGGCGGTGGTTCGGATTCTCGCTTCTTCCACAAT
ACCAGCAAGAAGGGCGAAACCCATGAGCTCCGCGAAGAGCTTCAATCTCA
AAACAAAGATAAGAAACGTGACGCGGTCAAGAAGGTCATTGCCAACATGA
CCGTTGGCAAGGACGTGTCCATGCTCTTCACGGACGTGGTAAACTGCATT
CAAACGGCCAATGTGGAGCTTAAAAAACTTGTGTATTTGTACATCATCAA
CTACGCCAAAAGCAACCCGGACCTGGCCCTCCTCGCCGTCAACACCTTTT
GCAAGGACGCGAACGACGCCAATCCGCTCATCCGCGCCCTGGCCGTGCGT
ACCATGGGCTGCATCCGCGTGGACCGGATCGTCGAGTACCTGTGCGAGCC
CCTAGCCCGGGCCCTGCGGGACGACGACCCCTATGTGCGGAAGACGGCGG
CCGTGTGCGTGGCCAAGCTCTACGACATCAGCCCCGACATGGTGGAGGAT
CGAGGGTTTTTAGACGTGCTCAGGGACCTGATTTGCGACTCCAACCCCAC
GGTCGTGGCGAACGCCGTGGCCGCGCTCTCCGAGATCCAGGAGACGTCCG
GGCAAGACGTGACCTTGATCACGGGCTCCGTCCTGCAGAAGCTCCTGGCG
GCGCTGAATGAGTGCACGGAGTGGGGCCAGGTCTACATTCTTGACGCCCT
CTCCCGGTACCAGCCCGCGGACGAGGTGGAGTCTGAGGGGATCGTTGAGC
GGGTCACCCCCCGGCTCCAGCACGCGAACTCGGCCGTGGTCATGAGTGCC
GTCAAAGTCGTGCTCGGGTACATGGAGCTCTGCAATCCCGACGTGGTCCG
CACGCTCACCCGCAAACTCGCGCCTCCCCTGGTAACGCTCTTGAACTCGG
AGCCGGAGATCCAGTACGTAGCGCTGAGGAACATCAACCTAATCGTGCAG
AAGCGGTCGGCGATCTTAGAGCACGAGATCAAGGTCTTCTTCTGCAAGTA
CAACGACCCCATCTACGTGAAAATGGAGAAGCTCGAAATCATCATCCGCC
TGGCCTCGGACCGCAACGCGGAGCAAGTGCTCTTGGAGCTGAAGGAGTAC
GCGCAGGAGGTGGACGTGGACTTTGTCCGTCGCGCGGTCCGGGCCATCGG
ACGCACCGCGATCAAGCTGGAACGGGCGGCCGAGAGGTGCATCAACGTGC
TGCTGGAGCTGATCCAGACGAAAGTGAACTATGTGGTGCAGGAGGCGATC
ATCGTCATCAAGGACATCTTCCGCCGGTACCCGAACCGGTACGAGCAGGT
GATCGCGGCCCTGTGCGAGAATTTGGAGACGCTGGACGAGCCGGAGGCCA
AGGCGAGCATGATCTGGATCATTGGCGAGTACGCGGACCGGATTGAGAAC
GCGGACGAGCTTTTGGATTCCTTCTTTCTCGACTCGTTCCTGGAGGAGAC
GCCGCAGGTGCAGCTGCAGCTTCTTACGGCCACCGTGAAGATCTTTTTGA
AGCAGCCCGCGGAGACACAGGCGCTGGTCCAGCGGGTCCTGAACATGGCC
ACGGAGGGCACCGACAATCCAGACTTGCGGGATCGGGGGTTCATCTACTG
GCGCCTGCTTTCCCACAGCCCCCAGGTGGCGCGTGCGGTGGTGCTGGGGG
AGAAGCCGACCATCGCAGACGACACCTTCGCCCTCGAACCGGCGCTGCTG
GACCAACTCATTCATCAGCTGGCTACCTTGTCCTCCATCTACCACAAGCC
GCCCGAAGCCTTCGTGGTTCGAATGGCGGTGCCGGTGGGACACGTGAGCG
GGGGGGTGGGGGAGGAATACGACGACGACTTGGAGTACCTGGAGGGGGAG
ATCGGTGCCATCGGCGCGGCCAAGGGCCCTTCCAAGCAGGCGGCTGGGAG
CGGGAACGGGGGAGGCCCGGGAGGGGAGGTGGACTTGCTGGACCTCGGGG
GGGTTGACGAGGCGCCTCCTGCGACGACGGGAGGGAAAGACGGAGGCCTC
GATGACTTCTTAGGCGGGGGGGACAGCAACGGCGGCGGAACAGCCGGGAG
CAGCCAGGCCAACACGCAAGTGGACAGGCCCCTCGTGTGTACACCGGAGC
AAGGCGGGGGTATCGGCATCCGAGCGGCCTTGCGGCAGGAGGGCGGGGGC
ATTTTTTGCGACATGACCTTCCAAAACACAGGACCCACCCCCCTTCAGGT
GCTGGCGATCAAGTTCAACGTCAACACCTTCGGGATCACGCCTGTCTCCC
CTCAGATTGCCTTCCCAGCCCCTGTTCCCCAAGGTGGCGCGACGAATTAC
GTTCTACCCCTCACCTTTGCGCCATCCATGGTGGCTTCAGGAGCTCCACC
GTCGCTGCAACTGCAGACGGCCGTTAAAAACATGGCCTCGGGCCACGTCT
TCTACTTTGCTATCCCTTACGACCTGAGTGTGCTCTTTGCGGCGTCCGGA
CAGACGGATCGGGCAGGCTTCATTCCAGCTTGGAAAGCCATAGACGACGC
GAATGAGGTGACAACATTGGCAGGGAGCCTTCCCCCTGCCTTCAGCTCGC
CCGACGCAGTTGTTTCTAAGCTTGGCTCTCGCCACGTAGCCTTTGTAGCC
CGTCGCCCTGTGCCAGGGACAACCCAAGAGAGCTTATACTTTTCGGCTGT
AACAGTGACGACGCCGCCGGTGCACTTCTTGGTGGAAATAACGCTGCAAG
CCGGGGTGGCAAGTGCCAAGCTGGCAGTGAAGTCGCAGTCTCAAACTTTG
GCGCCGATGGCATGTGCGGCGATCGAGGGGCTGCTTCGCAATTAGATTGG
GATAGGCAGAAGATTGATGTAGCGACAGGCTTCGTGTATTCAAGGAGGAG
AAGGCTTTGGACGACGGTGACAGTGAGAAAGGGAGGAATCGCAATACGTT
GCGACCCGTCTTCTTCTCAAAAAACAATGTGCTTGCCAGGAAAGGATATA
AAGAAAAACAGACCGGCGTTTCACGTGAGGTCTTTCGCGTTCGAAAACCT
CGAGAGTGGTATTCATTTTGGGGATTTCGTTTCGTCATCTCATATCGGGC
CCACTCGGTGTCACGGGAACGTCGCGCTTCAGGCTGCGTACGCGCACCCA
GCTTAGCATCTCGATCAGTCCCTCACGAGCCATGCACCGCGAGCGCTTCT
ATTTTATTCGTCTTTCATCCACAGGAAGGTCTGGGAAAGGTCGTTGTGGC
CTTATCCCAAGCACTGGCGGGTTTGTCGTGCAAATACTGCTCGGAGCTGG
CTTCACCCACATCGAAATTTCCGAAAGTCATCATGACGACTGTATCATTG
ACTTTCCTAGCACTGTTTCTTCTCAAGAACTTTCAATATGTCGCAGGTCA
AAGATATAATGTTTCTGCAATGCTTCGACGAGGAGACATGAGTAGTTACC
GAAGATTCGGAGAGGTGGTACAGGACATGGGGGACAGCAGCATCAAGGTC
GCTGGCTGCGCCATGCCGCTGAGCCTGCAAGTAAACAACAGCCAACGTAA
GGCAAATTTCTCCCTAGGTATTTCGGTCAGAACAGGGTTAGGTGATTCAG
AGGAATGGGTTACGGGAGCGACGACGTTTGCGCCCGGAGCTCAAGTAAAC
ATAACAGTGCCTATTGTCCCATGTCGCGAGATGGTACACGCATTGATCAT
GCGTGTGATAAATGCATCAGAAGCGCTGATATTGGACGGGATATCTAGCA
ATGTGAAAGGTACCTGGCGGAAAGGCGCTCAGCGGGAGAAGCAATTCCGT
GTCGACGCTTTTAAGACGTTGGTCGATTTGGAGGCAGGACCTTTTTAGGC
ATCGGAAGTCGAGCCCGTTGGCATTGAAAGATATGTGAAGCAGGAACATG
TTTGAAGGGGGTTGATGGGTGGGGAACAGGTCAGAGTTCAGGTGGATTAG
ATTAGTCAGGGCACAGGCCACAATCGCAAAAGCACTGCCATGCATGGAAC
AAGCCAGCAGTTAGGTAGGCTTGGAAAGAGTTTTCTTGTTTCGAAACTGT
AGACGGTATTCTATTAACAGTTACAGTAATTTTTGAACAGTAAAACGTGA
CCCCTTGTGAAATTCCGACATCGAAATGGACGCATTTAATTCATCGCTCT
TTGCAAATTGCGACACCCTAGGGGTTTCGCTGGGCTGCCAGACTCTGTAC
TTCTGGTAAGAAAGCTGACTTAGGTCTGAACAAACATCTGACGGCAATCT
CTGCTTTCAGGTTACGAAGGCGCTTGAAAATGAACACGAAACACGCATGC
TGAAT back to topprotein sequence of rna4810 >rna4810-protein ID=rna4810-protein|Name=rna4810|organism=Nannochloropsis gaditana|type=polypeptide|length=220bp
MREDAASKLSCCIITLHLSHVIFPTTDEGKGIHMRIFRSVPLPPCLTSNV
RHATGTLVLVPPYRCGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRWES
RRLVRTMSHGGAGEDSRLMSQWQQIRALHATRRQENLVVGGLVVAGGALA
LQYGLRVRVIVMRGVHASCPHAPFLARLTGPAFHPLTRPTSSGKPRRRQR
ERKTRQTAGRAEGAGASQGV back to topmRNA from alignment at CM002464.1:424154..426347- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4810 ID=rna4810|Name=rna4810|organism=Nannochloropsis gaditana|type=mRNA|length=2194bp|location=Sequence derived from alignment at CM002464.1:424154..426347- (Nannochloropsis gaditana)
CAATTTCAACGCGCTTCACGCACGTGGTGTGGGGGAAGAGGTGCGAAAAT
GACAGACAAATGAAAGGGAGTCCTGTGTTGCTGCGGCGTCCATGCGCGAG
GATGCTGCAAGTAAATTGTCTTGTTGTATAATTACGCTGCACCTTTCCCA
CGTTATTTTTCCTACTACTGACGAAGGGAAGGGCATACACATGAGAATCT
TCCGCAGTGTCCCCTTGCCTCCATGCCTAACCAGCAACGTAAGGCATGCG
ACTGGTACGCTGGTCCTGGTGCCACCATATCGATGCGGTAGTTGGTTAAG
CTCCCTTACATCAGCCATCCAACCGCCGTCACTCTCAACGGACGCTCAGG
GCGAGAAGCGCAGCAAAGGAATACAAAGGTGAGGGCTTGACAAAGAAAAA
TAGAGATGGTGTATAGAGATCAACGATGCATGAAATTGACTCGCTGGTCT
TCCTACACAGAAGATGGGAGTCTCGACGACTTGTTCGCACCATGAGCCAT
GGTGGGGCGGGGGAAGACAGCCGCTTAATGAGCCAATGGCAACAAATCCG
GGCATTGCATGCGACTAGGCGCCAAGAAAACCTTGTAGTGGGTGGCTTGG
TCGTGGCAGGTGGGGCCTTGGCGCTCCAGTACGGACTGCGGGTACGTGTG
ATTGTGATGCGCGGCGTGCATGCCTCCTGTCCCCATGCTCCTTTCTTGGC
TCGTCTCACAGGCCCCGCGTTCCACCCACTTACCAGGCCTACAAGCAGTG
GCAAGCCAAGAAGGCGGCAGAGGGAGCGGAAGACAAGGCAGACGGCGGGA
AGAGCGGAGGGGGCGGGGGCTTCTCAGGGGGTATGAGCTCCTTGTTCGCC
AAGCGCTTTTACGAGGGGGGCTTTGAGGATAAAATGACTCGACGGGAGGC
GGCCCTCATTTTGGGAGTCAGGTACGTTTTAGGGACTGGCTGTACTTTTA
AAGGCGAAACCTCATTCCACAGGCTCCGTGTGCGATCTGACAGGGAAAGC
GCGTCCCCCCAGCGGATAAAGGAGGCGCATCGGCGAATTCTCATGCTCAA
CCACCCCGACACGGGCGGATCTACTTATCTTGCGTCAAAGATAAATGAGG
TATGAATGTGTAGCTCCGGGATCAGGAGTAGACCGTCGGGTCGATGAGGC
GAGTAGTAACGCATCTTCTCCCACGTGACACAGGCCAAGGAGCTACTACT
CAAGGGCAGAGCATGATGGAAACGATAAAAGCTCAAAGAATCAAACCTTC
ATTCTTCGTTTTGGAATCAGTTTATTGGCAGAGCTGCCGGGTGCTCGAGA
AACACGCCGTTTCTCGCGCGCTTTTTGAGTACAGGGTGCTTGGCTAGGAG
GGTCCTCCCAGCCGACACATGCCTGTGGACAAGGGCACTCAAAATTTGTA
CGAGAAGCCATTAAAAATACGCCAAAATCAAATCCCCCCCCTTTCCCACC
CGTAAGTCAGTTTTCTCCCCCCCCGCTCCGGGGTGTAGCTCACCAAGTGC
TGCGACTCCCAGCCTTCCCCCTCATCGACCCCGGTCTCTGCTCCTGCCCC
GTCGGACCCCTAATCCGCCCCTCCTTTCGTGGACGCCATCACAGCCTAGA
GCTTGAGACATTCCTCATCGCAGAGCCCCTGAGACCCGTGCTAGTGAACG
ATAGAGCACTCTGAACGAGCAAGCGGTAGTCATGCGCCACCTCAAAGAGG
GATCGCCCTGGGCCCCTCCCTGCGCGGTTTCCCCTGTCCCCGTCTACTCG
GACATGGGCCTGCGTGGCTTTCAGGCGAGAGTCAAGCGTCCTCCTTTTTA
AAAAGCACGGACAGAGACTAAGAGGCCACGATTCGACCAATGATGCCCCT
TAACCTCATCTTCAGGCCCTAAGCGGTCCGCGTGCGGTTCATGACTGAGG
GAGGGAAGTGGTGAGGCTACTTCTCTTCCACCCATGGACAGCAAGCGCGG
CGGTCTTGGATGCTCGGCTGGGCTCAGTTCTTCTTTTGCTATGCCCGTCA
CTCGCGGACTGCTCGCGCCTTCCTGGCCCGGTCCATCCGTTTGTAGAGGG
CGACTTTTCCCTCGGTCGTCGCCACTGTCTCGCTCATGGACTCGTTGACC
GGCACCCTATCCTCCACTTTCCCCTCCCCGTTGCACAACTGCCCAATTTC
GAATCACTGTCAATTTACTTAACGTCACGGCGTGTTCGATCGGG back to topCoding sequence (CDS) from alignment at CM002464.1:424154..426347- >rna4810 ID=rna4810|Name=rna4810|organism=Nannochloropsis gaditana|type=CDS|length=1326bp|location=Sequence derived from alignment at CM002464.1:424154..426347- (Nannochloropsis gaditana)
AAGATGGGAGTCTCGACGACTTGTTCGCACCATGAGCCATGGTGGGGCGG
GGGAAGACAGCCGCTTAATGAGCCAATGGCAACAAATCCGGGCATTGCAT
GCGACTAGGCGCCAAGAAAACCTTGTAGTGGGTGGCTTGGTCGTGGCAGG
TGGGGCCTTGGCGCTCCAGTACGGACTGCGGGTACGTGTGATTGTGATGC
GCGGCGTGCATGCCTCCTGTCCCCATGCTCCTTTCTTGGCTCGTCTCACA
GGCCCCGCGTTCCACCCACTTACCAGGCCTACAAGCAGTGGCAAGCCAAG
AAGGCGGCAGAGGGAGCGGAAGACAAGGCAGACGGCGGGAAGAGCGGAGG
GGGCGGGGGCTTCTCAGGGGGTATGAATGCGCGAGGATGCTGCAAGTAAA
TTGTCTTGTTGTATAATTACGCTGCACCTTTCCCACGTTATTTTTCCTAC
TACTGACGAAGGGAAGGGCATACACATGAGAATCTTCCGCAGTGTCCCCT
TGCCTCCATGCCTAACCAGCAACGTAAGGCATGCGACTGGTACGCTGGTC
CTGGTGCCACCATATCGATGCGGTAGTTGGTTAAGCTCCCTTACATCAGC
CATCCAACCGCCGTCACTCTCAACGGACGCTCAGGGCGAGAAGCGCAGCA
AAGGAATACAAAGAAGATGGGAGTCTCGACGACTTGTTCGCACCATGAGC
CATGGTGGGGCGGGGGAAGACAGCCGCTTAATGAGCCAATGGCAACAAAT
CCGGGCATTGCATGCGACTAGGCGCCAAGAAAACCTTGTAGTGGGTGGCT
TGGTCGTGGCAGGTGGGGCCTTGGCGCTCCAGTACGGACTGCGGGTACGT
GTGATTGTGATGCGCGGCGTGCATGCCTCCTGTCCCCATGCTCCTTTCTT
GGCTCGTCTCACAGGCCCCGCGTTCCACCCACTTACCAGGCCTACAAGCA
GTGGCAAGCCAAGAAGGCGGCAGAGGGAGCGGAAGACAAGGCAGACGGCG
GGAAGAGCGGAGGGGGCGGGGGCTTCTCAGGGGGTATGAATGCGCGAGGA
TGCTGCAAGTAAATTGTCTTGTTGTATAATTACGCTGCACCTTTCCCACG
TTATTTTTCCTACTACTGACGAAGGGAAGGGCATACACATGAGAATCTTC
CGCAGTGTCCCCTTGCCTCCATGCCTAACCAGCAACGTAAGGCATGCGAC
TGGTACGCTGGTCCTGGTGCCACCATATCGATGCGGTAGTTGGTTAAGCT
CCCTTACATCAGCCATCCAACCGCCGTCACTCTCAACGGACGCTCAGGGC
GAGAAGCGCAGCAAAGGAATACAAAG back to top
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