EWM25884.1, cds4798 (CDS) Nannochloropsis gaditana

Overview
NameEWM25884.1
Unique Namecds4798
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:425970..426256 -
Alignment locationCM002464.1:425512..425887 -

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Properties
Property NameValue
Protein idEWM25884.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100054g20.5576.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:425970..426256 -
CM002464.1supercontigCM002464.1:425512..425887 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM25884.1 vs. NCBI_GenBank
Match: gi|585107752|gb|EWM25884.1| (hypothetical protein Naga_100054g20 [Nannochloropsis gaditana])

HSP 1 Score: 444.121 bits (1141), Expect = 1.006e-157
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 
Query:    1 MREDAASKLSCCIITLHLSHVIFPTTDEGKGIHMRIFRSVPLPPCLTSNVRHATGTLVLVPPYRCGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRWESRRLVRTMSHGGAGEDSRLMSQWQQIRALHATRRQENLVVGGLVVAGGALALQYGLRVRVIVMRGVHASCPHAPFLARLTGPAFHPLTRPTSSGKPRRRQRERKTRQTAGRAEGAGASQGV 220
            MREDAASKLSCCIITLHLSHVIFPTTDEGKGIHMRIFRSVPLPPCLTSNVRHATGTLVLVPPYRCGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRWESRRLVRTMSHGGAGEDSRLMSQWQQIRALHATRRQENLVVGGLVVAGGALALQYGLRVRVIVMRGVHASCPHAPFLARLTGPAFHPLTRPTSSGKPRRRQRERKTRQTAGRAEGAGASQGV
Sbjct:    1 MREDAASKLSCCIITLHLSHVIFPTTDEGKGIHMRIFRSVPLPPCLTSNVRHATGTLVLVPPYRCGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRWESRRLVRTMSHGGAGEDSRLMSQWQQIRALHATRRQENLVVGGLVVAGGALALQYGLRVRVIVMRGVHASCPHAPFLARLTGPAFHPLTRPTSSGKPRRRQRERKTRQTAGRAEGAGASQGV 220
[Close]
BLAST of EWM25884.1 vs. NCBI_GenBank
Match: gi|553195263|ref|XP_005856115.1| (chaperone -domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422292950|gb|EKU20251.1| chaperone -domain containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 253.832 bits (647), Expect = 2.470e-82
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 
Query:   34 MRIFRSVPLPPCLTSNVRHATGTLVLVPPYRCGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRWESRRLVRTMSHGGAGEDSRLMSQWQQIRALHATRRQENLVVGGLVVAGGALALQYGLRV 157
            MRIFRSVPLPPCLTSNVRHATGTLVLVPPYRCGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRWESRRLVRTMSHGGAGEDSRLMSQWQQIRALHATRRQENLVVGGLVVAGGALALQYGLR 
Sbjct:    1 MRIFRSVPLPPCLTSNVRHATGTLVLVPPYRCGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRWESRRLVRTMSHGGAGEDSRLMSQWQQIRALHATRRQENLVVGGLVVAGGALALQYGLRA 124
The following BLAST results are available for this feature:
BLAST of EWM25884.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107752|gb|EWM25884.1|1.006e-157100.00hypothetical protein Naga_100054g20 [Nannochlorops... [more]
gi|553195263|ref|XP_005856115.1|2.470e-8299.19chaperone -domain containing protein [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4810rna4810Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications