EWM25902.1, cds4778 (CDS) Nannochloropsis gaditana

Overview
NameEWM25902.1
Unique Namecds4778
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:365331..365870 +

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Properties
Property NameValue
Protein idEWM25902.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100048g29.10274.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:365331..365870 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25902.1 vs. NCBI_GenBank
Match: gi|585107771|gb|EWM25902.1| (hypothetical protein Naga_100048g29 [Nannochloropsis gaditana])

HSP 1 Score: 353.214 bits (905), Expect = 4.097e-123
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 
Query:    1 MVGAIEALDRSLVGRRSSWKPSFTRLPFRANDPCGIKRKISIRGLTLADICVSLKAVQMRRCDGASTSGSRRLKHPAIRHCLLLFTWARISSYIKNTLALCSHIGSPQRGIVRPSSCPLLLHRPPRPRRPCLPLLTAGPLCKGLCPKHNTSAPPPHRVPARSIIVLLHLLKFKNWARGS 179
            MVGAIEALDRSLVGRRSSWKPSFTRLPFRANDPCGIKRKISIRGLTLADICVSLKAVQMRRCDGASTSGSRRLKHPAIRHCLLLFTWARISSYIKNTLALCSHIGSPQRGIVRPSSCPLLLHRPPRPRRPCLPLLTAGPLCKGLCPKHNTSAPPPHRVPARSIIVLLHLLKFKNWARGS
Sbjct:    1 MVGAIEALDRSLVGRRSSWKPSFTRLPFRANDPCGIKRKISIRGLTLADICVSLKAVQMRRCDGASTSGSRRLKHPAIRHCLLLFTWARISSYIKNTLALCSHIGSPQRGIVRPSSCPLLLHRPPRPRRPCLPLLTAGPLCKGLCPKHNTSAPPPHRVPARSIIVLLHLLKFKNWARGS 179
The following BLAST results are available for this feature:
BLAST of EWM25902.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107771|gb|EWM25902.1|4.097e-123100.00hypothetical protein Naga_100048g29 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4790rna4790Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications