EWM25901.1, cds4760 (CDS) Nannochloropsis gaditana

Overview
NameEWM25901.1
Unique Namecds4760
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:313202..314571 +
Alignment locationCM002464.1:314728..314914 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25901.1
Producthomoaconitate hydratase family protein
Orig transcript idgnl|cribi|Naga_100048g8.10273.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:313202..314571 +
CM002464.1supercontigCM002464.1:314728..314914 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0016836hydro-lyase activity
GO:00515394 iron, 4 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0042221response to chemical
GO:0016043cellular component organization
GO:0019748secondary metabolic process
GO:0008652cellular amino acid biosynthetic process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0009507chloroplast
Vocabulary: INTERPRO
TermDefinition
IPR015937Acoase/IPM_deHydtase
IPR015931Acnase/IPM_dHydase_lsu_aba_1/3
IPR006251Homoacnase/IPMdehydase_lsu
IPR015932Aconitase/IPMdHydase_lsu_aba_2
IPR001030Acoase/IPM_deHydtase_lsu_aba
Homology
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|585107770|gb|EWM25901.1| (homoaconitate hydratase family protein [Nannochloropsis gaditana])

HSP 1 Score: 1068.14 bits (2761), Expect = 0.000e+0
Identity = 518/518 (100.00%), Postives = 518/518 (100.00%), Query Frame = 0
Query:    1 MAPAAQIVTMLGATLALCNAFVPPVPSTSPRFSKLAAPRRLAAAGADGASTKAPPMTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQPAETLATKAPASVFAKK 518
            MAPAAQIVTMLGATLALCNAFVPPVPSTSPRFSKLAAPRRLAAAGADGASTKAPPMTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQPAETLATKAPASVFAKK
Sbjct:    1 MAPAAQIVTMLGATLALCNAFVPPVPSTSPRFSKLAAPRRLAAAGADGASTKAPPMTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQPAETLATKAPASVFAKK 518          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|602183288|gb|AHN91991.1| (homoaconitate hydratase [Scytosiphon lomentaria])

HSP 1 Score: 785.793 bits (2028), Expect = 0.000e+0
Identity = 364/449 (81.07%), Postives = 408/449 (90.87%), Query Frame = 0
Query:   55 PMTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQPA 503
            PMT+TEKI+A+A G+ SVAPNDNVWVR D LMTHDVCGPGT G F KEFG  AKVWD E V+IIPD YIFT+DPRANRNVDILRDFV +Q+IKYFYDITDRG FK NPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDA+FV+GTGKLL+K PASM+F L GE+PD+LLAKD+ILQIIGDIGVAGATYR+MEF G+A+ QLSMEERQTLCNMAIEAGGKNG+IPAD VTTAYVDARNAG++PY IF AD +A YF+K  YD+ +LEPVVAKPHSPDN+ALAR+CRD KIDRVYIGSCTGGKTEDF AAARILQ  KV VPTFLVPAT++VY+D+ ++T+GGRTLA IFR+AGC++PASPSCAACLGGPADT+ARMNEP  CVSTTNRNFPGRMGHK AGI+LASPYTAAASA+TG+VTDPREVFEF + ++ A
Sbjct:   92 PMTVTEKIIAKACGRSSVAPNDNVWVRTDVLMTHDVCGPGTIGNFYKEFGPKAKVWDPEGVVIIPDQYIFTADPRANRNVDILRDFVNQQDIKYFYDITDRGNFKVNPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFALEGEMPDHLLAKDIILQIIGDIGVAGATYRSMEFAGSALGQLSMEERQTLCNMAIEAGGKNGVIPADHVTTAYVDARNAGNKPYEIFNADQNAKYFSKQRYDVGNLEPVVAKPHSPDNKALARDCRDTKIDRVYIGSCTGGKTEDFAAAARILQNQKVRVPTFLVPATQKVYNDIQTMTIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKGAGIYLASPYTAAASAITGFVTDPREVFEFDKGKRWA 540          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|1189383564|gb|OSX70878.1| (hypothetical protein BU14_0645s0001 [Porphyra umbilicalis])

HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0
Identity = 340/457 (74.40%), Postives = 387/457 (84.68%), Query Frame = 0
Query:   53 APPMTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQPAETLATK 509
            A PMTLTEKILA+AA + SV P DN+WV  D LMTHDVCGPGT G+FK+EFG +AKVWD E+V+IIPDHYIFT D RANRNVDILRDFV EQ IKYFYDI DR ++K NPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGN+DA FV+GTGKLLLKVPA+M+F LNG +PDY++AKD+ILQIIGDIG AGATYRAMEF G+ I  LSMEERQTLCNMAIEAGGKNG+I AD  T A++  R    RPY IF  D  A  +A Y YD ++LEPVVAKPHSPDN+ LAR C D++IDRVYIGSCTGGKTEDF+AAARILQ  +V VPTFLVPAT +V  DL ++T+ G TL  IFR AGCIDPA+PSCAACLGGP DTFAR+NEPL+CVSTTNRN+PGR GH +  IFLASPYTAAASA+TG VTDPR+V++F+  R+P+ETLA +
Sbjct:   66 ATPMTLTEKILAKAAERGSVRPGDNIWVNTDVLMTHDVCGPGTIGVFKREFGEDAKVWDTEKVVIIPDHYIFTEDVRANRNVDILRDFVNEQGIKYFYDIIDRSDYKVNPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNSDAGFVMGTGKLLLKVPATMRFVLNGVLPDYIMAKDLILQIIGDIGTAGATYRAMEFSGDVIDALSMEERQTLCNMAIEAGGKNGLIAADATTEAFLAGRT--DRPYEIFHTDGKAGTYADYTYDAATLEPVVAKPHSPDNKDLARNCADVRIDRVYIGSCTGGKTEDFLAAARILQGRQVCVPTFLVPATAKVASDLETITMNGETLKSIFRSAGCIDPAAPSCAACLGGPKDTFARINEPLVCVSTTNRNYPGRQGHSEGQIFLASPYTAAASAITGKVTDPRKVYDFNDVRRPSETLADR 520          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|545713125|ref|XP_005708866.1| (3-isopropylmalate dehydratase large subunit [Galdieria sulphuraria] >gi|452825349|gb|EME32346.1| 3-isopropylmalate dehydratase large subunit [Galdieria sulphuraria])

HSP 1 Score: 721.85 bits (1862), Expect = 0.000e+0
Identity = 334/499 (66.93%), Postives = 395/499 (79.16%), Query Frame = 0
Query:   19 NAFVPPVP-------STSPRFSKLAAPRRLAAAGADGASTKAPPMTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQPAETLATKA 510
              FVP V        +  P  + +A P+      +  +++   PMTLTEKIL++AA +  V P +N+WV  D LMTHDVCGPGT G+FK+EFG NAKVWD E+V+IIPDHYIFT+D RANRNVDILR+F +EQNIKYFYDI DR  F  NPDYKGVCH+ALAQEGHTRPGEVLFGTDSHTCNAGAFG FATGIGNTDA F+LGTGKLL+KVPA+MKF  +G++PDYLLAKD+ILQIIGDI V+GATYR +EF G+ I QLSMEERQTLCNMAIEAGGKN +IP D+ T+ Y+  R    R Y +F+ D  A  ++   Y    LEPVVAKPHSPDNR LA+ C D+K+DRVYIGSCTGGKTEDF+AAARI +  KV +PTFLVPATR+VYDD+Y L++GG+TLAQIF  AGCI PA PSCAACLGGP DTFAR+NEPL+CVSTTNRNFPGRMG KD  ++LASPYTAAA+A+TGYVTDPR+V++F    + A +L   A
Sbjct:  170 QGFVPSVQRKDTNLTTFQPLTATVAPPKSSRHVASSVSNSVQHPMTLTEKILSKAANRPCVKPGENIWVNVDVLMTHDVCGPGTIGIFKREFGENAKVWDPEKVIIIPDHYIFTADQRANRNVDILREFAREQNIKYFYDIKDRQNFLNNPDYKGVCHIALAQEGHTRPGEVLFGTDSHTCNAGAFGMFATGIGNTDAGFILGTGKLLIKVPATMKFVFHGDMPDYLLAKDLILQIIGDISVSGATYRTLEFSGDIISQLSMEERQTLCNMAIEAGGKNAVIPCDQTTSEYLKGRT--QRSYEVFQTDSSADLYSHREYITHQLEPVVAKPHSPDNRDLAKNCSDVKVDRVYIGSCTGGKTEDFIAAARIFKDRKVKIPTFLVPATRQVYDDIYRLSIGGQTLAQIFEQAGCIGPAPPSCAACLGGPKDTFARINEPLVCVSTTNRNFPGRMGSKDGQVYLASPYTAAATALTGYVTDPRQVYDFGTEHRSAYSLVDSA 666          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|546314166|ref|XP_005715507.1| (3-isopropylmalate dehydratase [Chondrus crispus] >gi|507111987|emb|CDF35688.1| 3-isopropylmalate dehydratase [Chondrus crispus])

HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0
Identity = 347/502 (69.12%), Postives = 397/502 (79.08%), Query Frame = 0
Query:   20 AFVPPVPSTSPRFSKLAAPRRL---------AAAGADGASTKAP----PMTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEF-SQTRQPAETLA 507
            AFV P+P   P  S  AA R L          AA +    T  P    PMTLTEK+LAR A K  V P DNVWV  D LMTHDVCGP TFG+FK+EFG +AKVWDR RV+IIPDHYIFT D RANRNVD LR F  EQ+IKYFYDI D   F+ANPDYKGVCH+ALAQEGHTR GE+LFGTDSHTCNAGAFG FATGIGNTDA F+LGTGKLL+KVP +M+FE+NG +PDYLLAKD+IL IIGDIGV GATYRAMEF G+ I  LSMEER TLCNMA+EAGGKNG+I AD  T AY+ AR  GS+P  IF  D +AS++A Y Y+++ LEPVVAKPHSPDNRALA+EC D++IDR YIGSCTGGKTEDF+AAAR+LQ  KV+VPTFLVPAT++VY+D+ +L + G TL  IF +AGCI    P CAACLGGP+DTFAR+NEPL+CVSTTNRNFPGRMG K+  I+LASPYT AASAVTGYVTDPREV++F +  R P ETLA
Sbjct:    2 AFVAPLPV--PTHSAAAARRPLTHRRHAVVAVAAPSRSTPTTKPAVTHPMTLTEKLLARGAEKPFVKPGDNVWVNVDALMTHDVCGPPTFGIFKREFGDDAKVWDRNRVIIIPDHYIFTEDKRANRNVDTLRQFATEQDIKYFYDIKDLSNFRANPDYKGVCHIALAQEGHTRSGEILFGTDSHTCNAGAFGMFATGIGNTDAGFILGTGKLLVKVPQTMRFEMNGNMPDYLLAKDLILNIIGDIGVGGATYRAMEFAGSTIGDLSMEERMTLCNMAVEAGGKNGLIAADHRTEAYLAAR--GSKPTEIFHTDEEASFYADYKYNVADLEPVVAKPHSPDNRALAKECSDVRIDRCYIGSCTGGKTEDFLAAARVLQGRKVAVPTFLVPATQKVYEDVETLRINGETLKDIFYNAGCIALGDPGCAACLGGPSDTFARLNEPLVCVSTTNRNFPGRMGDKEGQIYLASPYTTAASAVTGYVTDPREVYDFDANKRHPTETLA 499          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|505017305|ref|WP_015204407.1| (3-isopropylmalate dehydratase large subunit [Crinalium epipsammum] >gi|428248522|gb|AFZ14302.1| homoaconitate hydratase family protein [Crinalium epipsammum PCC 9333])

HSP 1 Score: 709.909 bits (1831), Expect = 0.000e+0
Identity = 326/439 (74.26%), Postives = 382/439 (87.02%), Query Frame = 0
Query:   56 MTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVF 494
            MTLTEKILARA+G+  V P DN+WV  D LMTHDVCGPGT G+FK+EFGA+AKVWD E++++IPDHYIFT+D RANRNVDILRDF +EQ IKYFYDITDR +FKANPDYKGVCH+ALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDA F++GTGKLL+KVPA+M+F LNGE+P YLLAKD+ILQIIGDIGVAGATYRAMEF G+ I+ LSME+R TLCNMAIEAGGKNG +  DE T  YV  R+  ++P+     D DA +++   YD+S LEPVVAKPHSPDNRALARECRD+KIDRVYIGSCTGGKT DF+ AA++L+  +V VPT++VPAT++VY+DL++    G+TL++I  DAGCI+PA+PSCAACLGGP DTF RMNEP +CVSTTNRNFPGRMG+K+AGI+LASPYTAAASA+TGYVTDPRE  
Sbjct:    3 MTLTEKILARASGRSVVEPGDNIWVNVDLLMTHDVCGPGTIGVFKREFGADAKVWDTEKIVLIPDHYIFTADERANRNVDILRDFAKEQGIKYFYDITDRSDFKANPDYKGVCHIALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFLLNGEMPKYLLAKDLILQIIGDIGVAGATYRAMEFAGSTIQHLSMEDRMTLCNMAIEAGGKNGTVAPDETTFEYV--RDRTNKPFEPVYTDADARFYSDRQYDVSQLEPVVAKPHSPDNRALARECRDVKIDRVYIGSCTGGKTSDFMYAAQVLKGQQVKVPTYIVPATQKVYEDLFTTKYDGKTLSEILLDAGCIEPAAPSCAACLGGPKDTFGRMNEPEICVSTTNRNFPGRMGNKEAGIYLASPYTAAASAITGYVTDPREFL 439          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|1121317423|ref|WP_073627562.1| (3-isopropylmalate dehydratase large subunit [Scytonema sp. HK-05] >gi|1115297286|gb|OKH60273.1| 3-isopropylmalate dehydratase [Scytonema sp. HK-05] >gi|1210124541|dbj|BAY43655.1| homoaconitate hydratase family protein [Scytonema sp. HK-05])

HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0
Identity = 322/437 (73.68%), Postives = 380/437 (86.96%), Query Frame = 0
Query:   56 MTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPRE 492
            MTL EKILA+A+G+  V P +N+WV  D LMTHDVCGPGT G+FK+EFGA+AKVWD E++++IPDHYIFT+D RANRNVDILRDF +EQ+IKYFYDITDR  FKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDA F++GTGKLL+KVPA+M+F L+GE+P YLLAKD+ILQIIGDI VAGATYR MEF G A+ Q++MEER TLCNM IEAGGKNG I  DE T  Y+  R   ++P+     D DA +++++ YD+S LEPVVAKPHSPDNRALAREC D+KI+RVYIGSCTGGKTEDF  AA++L+ +KV VPT++VPAT++VY+DL++L    +TL++IF DAGCI+PA+PSCAACLGGP DTF RMNEP +CVSTTNRNFPGRMGHK+AG++LASPYTAAASAVTGYVTDPRE
Sbjct:    3 MTLVEKILAKASGRSVVEPGENIWVNVDVLMTHDVCGPGTIGVFKREFGADAKVWDSEKIVLIPDHYIFTADERANRNVDILRDFAKEQSIKYFYDITDRANFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFVLDGEMPPYLLAKDLILQIIGDISVAGATYRTMEFSGEAVEQMTMEERMTLCNMVIEAGGKNGTIAPDETTFEYLRGRT--NKPFESVYTDSDAKFYSQHRYDVSKLEPVVAKPHSPDNRALARECSDVKINRVYIGSCTGGKTEDFFHAAQVLKGHKVKVPTYIVPATQKVYEDLFTLKYEEQTLSEIFLDAGCIEPAAPSCAACLGGPKDTFGRMNEPEICVSTTNRNFPGRMGHKEAGVYLASPYTAAASAVTGYVTDPRE 437          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|1210208258|dbj|BAZ27299.1| (homoaconitate hydratase family protein [Scytonema sp. NIES-4073])

HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0
Identity = 322/437 (73.68%), Postives = 381/437 (87.19%), Query Frame = 0
Query:   56 MTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPRE 492
            MTL EKILA+A+G+  V P +N+WV  D LMTHDVCGPGT G+FK+EFGA+AKVWD E++++IPDHYIFT+D RANRNVDILRDF +EQ+IKYFYDITDR  FKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDA F++GTGKLL+KVPA+M+F L+GE+P YLLAKD+ILQIIGDI VAGATYR MEF G A+ Q++MEER TLCNM IEAGGKNG I  DE T  Y+  R   ++P+     D DA++++++ YD+S LEPVVAKPHSPDNRALAREC D+KI+RVYIGSCTGGKTEDF  AA++L+ +KV VPT++VPAT++VY+DL++L    +TL++IF DAGCI+PA+PSCAACLGGP DTF RMNEP +CVSTTNRNFPGRMGHK+AG++LASPYTAAASAVTGYVTDPRE
Sbjct:    3 MTLVEKILAKASGRSVVEPGENIWVNVDVLMTHDVCGPGTIGVFKREFGADAKVWDSEKIVLIPDHYIFTADERANRNVDILRDFAKEQSIKYFYDITDRANFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFVLDGEMPPYLLAKDLILQIIGDISVAGATYRTMEFSGEAVEQMTMEERMTLCNMVIEAGGKNGTIAPDETTFEYLRGRT--NKPFEPVYTDSDANFYSQHRYDVSKLEPVVAKPHSPDNRALARECSDVKINRVYIGSCTGGKTEDFFHAAQVLKGHKVKVPTYIVPATQKVYEDLFTLKYEEQTLSEIFLDAGCIEPAAPSCAACLGGPKDTFGRMNEPEICVSTTNRNFPGRMGHKEAGVYLASPYTAAASAVTGYVTDPRE 437          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|1200098190|ref|WP_087537719.1| (3-isopropylmalate dehydratase [Nostocales cyanobacterium HT-58-2] >gi|1199827578|gb|ARV57392.1| 3-isopropylmalate dehydratase [Nostocales cyanobacterium HT-58-2])

HSP 1 Score: 706.057 bits (1821), Expect = 0.000e+0
Identity = 322/437 (73.68%), Postives = 381/437 (87.19%), Query Frame = 0
Query:   56 MTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPRE 492
            MTL EKILA+A+G+  V P +N+WV  D LMTHDVCGPGT G+FK+EFGA+AKVWD E++++IPDHYIFT+D RANRNVDILRDF +EQ IKYFYDITDR  FKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDA F++GTGKLL+KVPA+M+F L+GE+P YLLAKD+ILQIIGDI VAGATYR MEF G A+ +++MEER TLCNM IEAGGKNG I  DE T  YV +R   ++P+     D DA +++++ YD+S LEPVVAKPHSPDNRALARECRD+KI+RVYIGSCTGGKTEDF+ AA++L+ +KV VPT++VPAT++VY+DL+ L   G+TL++IF DAGCI+P +PSCAACLGGP DTF RMNEP +CVSTTNRNFPGRMGHK+AGI+LASP+TAAASA+TGYVTDPRE
Sbjct:    3 MTLVEKILAKASGRSVVQPGENIWVNVDVLMTHDVCGPGTIGVFKREFGADAKVWDPEKIVLIPDHYIFTADERANRNVDILRDFAKEQGIKYFYDITDRANFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFVLDGEMPPYLLAKDLILQIIGDISVAGATYRTMEFTGEAVERMTMEERMTLCNMVIEAGGKNGTIAPDETTFEYVRSRT--NKPFESVYTDSDAKFYSEHRYDVSKLEPVVAKPHSPDNRALARECRDVKINRVYIGSCTGGKTEDFLHAAQVLKGHKVKVPTYIVPATQKVYEDLFKLKYEGQTLSEIFLDAGCIEPTAPSCAACLGGPKDTFGRMNEPEICVSTTNRNFPGRMGHKEAGIYLASPFTAAASALTGYVTDPRE 437          
BLAST of EWM25901.1 vs. NCBI_GenBank
Match: gi|497319742|ref|WP_009633955.1| (3-isopropylmalate dehydratase large subunit [Synechocystis sp. PCC 7509])

HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0
Identity = 322/439 (73.35%), Postives = 376/439 (85.65%), Query Frame = 0
Query:   56 MTLTEKILARAAGKESVAPNDNVWVRADNLMTHDVCGPGTFGLFKKEFGANAKVWDRERVLIIPDHYIFTSDPRANRNVDILRDFVQEQNIKYFYDITDRGEFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAKDMILQIIGDIGVAGATYRAMEFGGNAIRQLSMEERQTLCNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVF 494
            MTLTEKILA+AA +  V P  N+WV  D LMTHDVCGPGT G+FK+EFGA+AKVWD E++++IPDHYIFT+D RANRNVDILRDF +EQ IKYFYDITDR +FKANPDYKGVCH+ LAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDA F++GTGKLL+KVPA+M+F LNG +PDYLLAKD+ILQIIGDIGVAGATYR MEF G  ++ L+MEER TLCNMAIEAGGKNG I ADE T  Y+ +R   ++P+  F +D DA +++ Y YD+S LEPVVAKPHSPDNRA AREC D+KIDRVYIGSCTGGKT DF+ AARIL+  KV VPT+LVPAT++VY+DL++    G+TL++IF ++GCI+PA+PSCAACLGGP DTF RMN   +CVSTTNRNFPGRMG K+A I+LASPYTAAASA+TGYVTDPRE  
Sbjct:    3 MTLTEKILAKAASQAVVEPGQNIWVDVDLLMTHDVCGPGTIGVFKREFGADAKVWDSEKIVLIPDHYIFTADERANRNVDILRDFAREQGIKYFYDITDRSDFKANPDYKGVCHITLAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMQFVLNGTLPDYLLAKDLILQIIGDIGVAGATYRTMEFSGETVQNLTMEERMTLCNMAIEAGGKNGTISADETTYEYLRSRT--NKPFESFYSDSDAKFYSSYTYDVSQLEPVVAKPHSPDNRAKARECSDVKIDRVYIGSCTGGKTTDFINAARILKGQKVKVPTYLVPATQKVYEDLFTHKYQGQTLSEIFIESGCIEPAAPSCAACLGGPKDTFGRMNSAEVCVSTTNRNFPGRMGEKNAQIYLASPYTAAASAITGYVTDPREFL 439          
The following BLAST results are available for this feature:
BLAST of EWM25901.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107770|gb|EWM25901.1|0.000e+0100.00homoaconitate hydratase family protein [Nannochlor... [more]
gi|602183288|gb|AHN91991.1|0.000e+081.07homoaconitate hydratase [Scytosiphon lomentaria][more]
gi|1189383564|gb|OSX70878.1|0.000e+074.40hypothetical protein BU14_0645s0001 [Porphyra umbi... [more]
gi|545713125|ref|XP_005708866.1|0.000e+066.933-isopropylmalate dehydratase large subunit [Galdi... [more]
gi|546314166|ref|XP_005715507.1|0.000e+069.123-isopropylmalate dehydratase [Chondrus crispus] >... [more]
gi|505017305|ref|WP_015204407.1|0.000e+074.263-isopropylmalate dehydratase large subunit [Crina... [more]
gi|1121317423|ref|WP_073627562.1|0.000e+073.683-isopropylmalate dehydratase large subunit [Scyto... [more]
gi|1210208258|dbj|BAZ27299.1|0.000e+073.68homoaconitate hydratase family protein [Scytonema ... [more]
gi|1200098190|ref|WP_087537719.1|0.000e+073.683-isopropylmalate dehydratase [Nostocales cyanobac... [more]
gi|497319742|ref|WP_009633955.1|0.000e+073.353-isopropylmalate dehydratase large subunit [Synec... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4772rna4772Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications